FFCP PHASE1:Hg19::chr2:234216516..234216542,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6295 | |EntrezGene=6295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10521 | |HGNC=10521 | ||
|TSSclassifier=S | |||
|UniProt=C9JSX4 | |UniProt=C9JSX4 | ||
|association_with_transcript=0bp_to_ENST00000415974,ENST00000462487,ENST00000471884,ENST00000479450_5end | |association_with_transcript=0bp_to_ENST00000415974,ENST00000462487,ENST00000471884,ENST00000479450_5end |
Revision as of 04:34, 9 July 2013
Short description: | p1@SAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SAG_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000415974, ENST00000462487, ENST00000471884, ENST00000479450_5end |
EntrezGene: | SAG |
HGNC: | 10521 |
UniProt: | C9JSX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SAG |
---|
0
100
200
300
400
500
600
700
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 1.52e-44 | 6 |
photoreceptor array | 1.52e-44 | 6 |
posterior segment of eyeball | 1.52e-44 | 6 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
camera-type eye | 2.76e-14 | 20 |
simple eye | 2.76e-14 | 20 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 8.38e-07 | 11 |
Showing 1 to 1 of 1 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.