FFCP PHASE1:Hg19::chr10:1094342..1094359,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3422|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5387|TSSclassifier=S|UniProt=C9JD53|association_with_transcript=-5bp_to_ENST00000427898_5end|coexpression_cluster_id=C22|description=CAGE_peak_7_at_IDI1_5end|id=chr10:1094342..1094359,-|ontology_enrichment_celltype=CL:0000738!2.23e-25!140;CL:0000037!4.57e-19!172;CL:0000566!4.57e-19!172;CL:0002031!4.58e-18!124;CL:0000988!4.84e-17!182;CL:0002032!1.14e-16!165;CL:0000837!1.14e-16!165;CL:0002087!1.19e-16!119;CL:0000766!3.95e-14!76;CL:0002057!3.40e-13!42;CL:0000860!7.02e-12!45;CL:0000624!3.03e-11!6;CL:0000094!1.40e-10!8;CL:0000839!3.65e-09!70;CL:0000557!4.78e-09!71;CL:0000838!5.40e-09!52;CL:0000763!9.83e-09!112;CL:0000049!9.83e-09!112;CL:0000542!1.03e-08!53;CL:0000051!1.03e-08!53;CL:0000081!2.82e-07!11;CL:0002009!4.76e-07!65;CL:0000791!6.30e-07!18;CL:0000789!6.30e-07!18;CL:0002420!6.30e-07!18;CL:0002419!6.30e-07!18;CL:0000790!6.30e-07!18|ontology_enrichment_celltype_v019=CL:0000624;3.95e-28;6!CL:0000094;3.18e-20;8!CL:0000791;3.51e-20;18!CL:0000789;3.51e-20;18!CL:0002419;3.51e-20;18!CL:0000623;1.45e-15;3!CL:0000226;9.61e-15;3!CL:0000842;9.61e-15;3!CL:0000898;1.36e-14;3!CL:0000081;1.50e-14;11!CL:0000084;4.59e-14;25!CL:0000542;1.06e-10;53!CL:0000771;1.06e-10;2!CL:0000815;2.66e-10;2!CL:0000792;2.66e-10;2!CL:0002677;2.66e-10;2!CL:0000775;3.89e-07;3|ontology_enrichment_celltype_v019_2=CL:0000624,3.87e-28,6;CL:0000738,5.72e-24,136;CL:0000094,2.31e-20,8;CL:0000791,3.32e-20,18;CL:0000789,3.32e-20,18;CL:0002420,3.32e-20,18;CL:0002419,3.32e-20,18;CL:0000790,3.32e-20,18;CL:0000037,3.85e-18,168;CL:0000838,1.93e-17,52;CL:0000542,4.80e-17,53;CL:0000051,4.80e-17,53;CL:0000988,7.00e-17,177;CL:0000623,1.59e-15,3;CL:0000825,1.59e-15,3;CL:0002032,7.86e-15,161;CL:0000837,7.86e-15,161;CL:0000898,1.16e-14,3;CL:0000081,1.19e-14,11;CL:0000226,1.40e-14,3;CL:0000842,1.40e-14,3;CL:0002087,1.87e-14,115;CL:0000084,4.41e-14,25;CL:0000827,4.41e-14,25;CL:0002031,3.52e-12,120;CL:0000771,8.55e-11,2;CL:0000815,2.66e-10,2;CL:0000792,2.66e-10,2;CL:0002677,2.66e-10,2;CL:0000775,3.89e-07,3;CL:0000767,9.07e-07,3|ontology_enrichment_development_v019=CL:0000790;3.51e-20;18!CL:0000051;1.06e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.26e-08!102;UBERON:0003061!1.26e-08!102;UBERON:0002371!6.02e-08!80;UBERON:0002193!1.22e-07!112;UBERON:0001474!6.54e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,1.91914699048606,1.54816123316076,0,0,0,0,0,0,0.553995408531877,2.4065333696417,1.73608696572681,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.502497330513487,1.5644487552606,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,3.41527781465669,5.28513470433845,3.82273228125229,1.32171328579026,5.60508562981536,0,4.13090517239049,6.6811829667358,5.14003747498773,0.167186495390678,3.58514493296949,2.8406868344084,1.94826728407911,0.557052284425868,3.53527088969805,2.87994062958707,4.33286182024025,0,0.520237390239513,0,0,0,2.66915813691709,3.47803076516627,1.04535523804977,0,3.83220493601921,1.71813722741315,4.80737414837055,0,0,0,0,0,0,0,0,8.26587647221403,12.5696892018248,5.64815175142916,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0485687702983,7.54696512008311,5.00537841491019,0,0,0,0,0,4.49404214368309,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,3.45142721309787,4.16237475433433,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5387 | |||
|TSSclassifier=S | |||
|UniProt=C9JD53 | |||
|association_with_transcript=-5bp_to_ENST00000427898_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_IDI1_5end | |||
|id=chr10:1094342..1094359,- | |||
|ontology_enrichment_celltype=CL:0000738!2.23e-25!140;CL:0000037!4.57e-19!172;CL:0000566!4.57e-19!172;CL:0002031!4.58e-18!124;CL:0000988!4.84e-17!182;CL:0002032!1.14e-16!165;CL:0000837!1.14e-16!165;CL:0002087!1.19e-16!119;CL:0000766!3.95e-14!76;CL:0002057!3.40e-13!42;CL:0000860!7.02e-12!45;CL:0000624!3.03e-11!6;CL:0000094!1.40e-10!8;CL:0000839!3.65e-09!70;CL:0000557!4.78e-09!71;CL:0000838!5.40e-09!52;CL:0000763!9.83e-09!112;CL:0000049!9.83e-09!112;CL:0000542!1.03e-08!53;CL:0000051!1.03e-08!53;CL:0000081!2.82e-07!11;CL:0002009!4.76e-07!65;CL:0000791!6.30e-07!18;CL:0000789!6.30e-07!18;CL:0002420!6.30e-07!18;CL:0002419!6.30e-07!18;CL:0000790!6.30e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.95e-28;6!CL:0000094;3.18e-20;8!CL:0000791;3.51e-20;18!CL:0000789;3.51e-20;18!CL:0002419;3.51e-20;18!CL:0000623;1.45e-15;3!CL:0000226;9.61e-15;3!CL:0000842;9.61e-15;3!CL:0000898;1.36e-14;3!CL:0000081;1.50e-14;11!CL:0000084;4.59e-14;25!CL:0000542;1.06e-10;53!CL:0000771;1.06e-10;2!CL:0000815;2.66e-10;2!CL:0000792;2.66e-10;2!CL:0002677;2.66e-10;2!CL:0000775;3.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.87e-28,6;CL:0000738,5.72e-24,136;CL:0000094,2.31e-20,8;CL:0000791,3.32e-20,18;CL:0000789,3.32e-20,18;CL:0002420,3.32e-20,18;CL:0002419,3.32e-20,18;CL:0000790,3.32e-20,18;CL:0000037,3.85e-18,168;CL:0000838,1.93e-17,52;CL:0000542,4.80e-17,53;CL:0000051,4.80e-17,53;CL:0000988,7.00e-17,177;CL:0000623,1.59e-15,3;CL:0000825,1.59e-15,3;CL:0002032,7.86e-15,161;CL:0000837,7.86e-15,161;CL:0000898,1.16e-14,3;CL:0000081,1.19e-14,11;CL:0000226,1.40e-14,3;CL:0000842,1.40e-14,3;CL:0002087,1.87e-14,115;CL:0000084,4.41e-14,25;CL:0000827,4.41e-14,25;CL:0002031,3.52e-12,120;CL:0000771,8.55e-11,2;CL:0000815,2.66e-10,2;CL:0000792,2.66e-10,2;CL:0002677,2.66e-10,2;CL:0000775,3.89e-07,3;CL:0000767,9.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.51e-20;18!CL:0000051;1.06e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-08!102;UBERON:0003061!1.26e-08!102;UBERON:0002371!6.02e-08!80;UBERON:0002193!1.22e-07!112;UBERON:0001474!6.54e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,1.91914699048606,1.54816123316076,0,0,0,0,0,0,0.553995408531877,2.4065333696417,1.73608696572681,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.502497330513487,1.5644487552606,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,3.41527781465669,5.28513470433845,3.82273228125229,1.32171328579026,5.60508562981536,0,4.13090517239049,6.6811829667358,5.14003747498773,0.167186495390678,3.58514493296949,2.8406868344084,1.94826728407911,0.557052284425868,3.53527088969805,2.87994062958707,4.33286182024025,0,0.520237390239513,0,0,0,2.66915813691709,3.47803076516627,1.04535523804977,0,3.83220493601921,1.71813722741315,4.80737414837055,0,0,0,0,0,0,0,0,8.26587647221403,12.5696892018248,5.64815175142916,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0485687702983,7.54696512008311,5.00537841491019,0,0,0,0,0,4.49404214368309,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,3.45142721309787,4.16237475433433,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,3.59958226482401,0,0.121499113316049,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,1.77213635993397,0.488105059607853,0.250381861413,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.615349092722265,0.252071696221718,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.883606528698812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06090177505535,1.33982065078089,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@IDI1 | |||
}} |
Revision as of 11:38, 10 September 2013
Short description: | p7@IDI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_IDI1_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -5bp_to_ENST00000427898_5end |
EntrezGene: | IDI1 |
HGNC: | 5387 |
UniProt: | C9JD53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.87e-28 | 6 |
leukocyte | 5.72e-24 | 136 |
granulocyte | 2.31e-20 | 8 |
mature alpha-beta T cell | 3.32e-20 | 18 |
alpha-beta T cell | 3.32e-20 | 18 |
immature T cell | 3.32e-20 | 18 |
mature T cell | 3.32e-20 | 18 |
immature alpha-beta T cell | 3.32e-20 | 18 |
hematopoietic stem cell | 3.85e-18 | 168 |
lymphoid lineage restricted progenitor cell | 1.93e-17 | 52 |
lymphocyte | 4.80e-17 | 53 |
common lymphoid progenitor | 4.80e-17 | 53 |
hematopoietic cell | 7.00e-17 | 177 |
natural killer cell | 1.59e-15 | 3 |
pro-NK cell | 1.59e-15 | 3 |
hematopoietic oligopotent progenitor cell | 7.86e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.86e-15 | 161 |
naive T cell | 1.16e-14 | 3 |
blood cell | 1.19e-14 | 11 |
single nucleate cell | 1.40e-14 | 3 |
mononuclear cell | 1.40e-14 | 3 |
nongranular leukocyte | 1.87e-14 | 115 |
T cell | 4.41e-14 | 25 |
pro-T cell | 4.41e-14 | 25 |
hematopoietic lineage restricted progenitor cell | 3.52e-12 | 120 |
eosinophil | 8.55e-11 | 2 |
regulatory T cell | 2.66e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.66e-10 | 2 |
naive regulatory T cell | 2.66e-10 | 2 |
neutrophil | 3.89e-07 | 3 |
basophil | 9.07e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.