FFCP PHASE1:Hg19::chr10:121030761..121030773,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr10:121030761..121030773,+|id=chr10:121030761..121030773,+|ontology_enrichment_celltype=CL:0000738!1.17e-26!140;CL:0000988!6.69e-21!182;CL:0000037!6.33e-20!172;CL:0000566!6.33e-20!172;CL:0002087!1.24e-17!119;CL:0002032!4.39e-17!165;CL:0000837!4.39e-17!165;CL:0002031!1.32e-16!124;CL:0002393!2.90e-14!9;CL:0002397!2.90e-14!9;CL:0000766!5.18e-14!76;CL:0000094!6.05e-14!8;CL:0000081!1.43e-12!11;CL:0000080!9.16e-12!6;CL:0000838!7.29e-11!52;CL:0000542!1.48e-10!53;CL:0000051!1.48e-10!53;CL:0000860!4.37e-10!45;CL:0000791!1.58e-09!18;CL:0000789!1.58e-09!18;CL:0002420!1.58e-09!18;CL:0002419!1.58e-09!18;CL:0000790!1.58e-09!18;CL:0000623!6.52e-08!3;CL:0000825!6.52e-08!3;CL:0000763!7.42e-08!112;CL:0000049!7.42e-08!112;CL:0000767!9.86e-08!3;CL:0002057!1.68e-07!42;CL:0000839!2.31e-07!70;CL:0000842!2.79e-07!3;CL:0000557!3.44e-07!71|ontology_enrichment_celltype_v019=CL:0000094;3.88e-51;8!CL:0000081;4.97e-37;11!CL:0000623;3.04e-26;3!CL:0000767;1.72e-25;3!CL:0002393;5.26e-22;6!CL:0002397;5.26e-22;6!CL:0000771;1.59e-18;2!CL:0000097;9.77e-16;5!CL:0000775;2.09e-12;3!CL:0000766;1.84e-11;69!CL:0000163;5.59e-09;9!CL:0000625;2.16e-07;11|ontology_enrichment_celltype_v019_2=CL:0000094,3.48e-51,8;CL:0000081,4.60e-37,11;CL:0000738,9.50e-29,136;CL:0000623,2.91e-26,3;CL:0000825,2.91e-26,3;CL:0000767,1.46e-25,3;CL:0000766,4.65e-23,72;CL:0000037,1.19e-22,168;CL:0002393,2.14e-22,9;CL:0002397,2.14e-22,9;CL:0002032,1.65e-21,161;CL:0000837,1.65e-21,161;CL:0000988,2.50e-21,177;CL:0000771,1.59e-18,2;CL:0000097,8.20e-16,5;CL:0002028,8.20e-16,5;CL:0000763,1.41e-14,108;CL:0000049,1.41e-14,108;CL:0002031,9.19e-13,120;CL:0000775,2.15e-12,3;CL:0002087,9.03e-10,115;CL:0000163,5.09e-09,9;CL:0000134,7.12e-09,354;CL:0002320,1.25e-08,361;CL:0000219,9.16e-08,386;CL:0000625,2.23e-07,11;CL:0000034,3.01e-07,441;CL:0000838,3.88e-07,52;CL:0000542,5.47e-07,53;CL:0000051,5.47e-07,53;CL:0000839,7.87e-07,66|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.98e-14!15;UBERON:0000179!1.98e-14!15;UBERON:0000463!1.98e-14!15;UBERON:0002390!1.90e-13!102;UBERON:0003061!1.90e-13!102;UBERON:0002193!2.30e-12!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.70e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,8.26064981382698,1.53531759238885,1.23852898652861,0,0,0,0,0,0,1.10799081706375,1.40381113229099,2.60413044859022,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,1.05627643155971,0.212604299965044,0.209658645508376,0.44931452458598,0,0,1.14005097496499,0,0.547992461293902,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0.68725489096526,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,2.21767417547206,2.13952156626806,2.02754165435919,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,11.8602375692457,19.3890132074163,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14656231081544,1.8735593944205,4.03975786964416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,4.13764596424047,3.88129634747131,5.26206448746968,0,0,0,0,0,3.74503511973591,0,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.403100834920358,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0|short_description=p@chr10:121030761..121030773,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:121030761..121030773,+ | |||
|id=chr10:121030761..121030773,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-26!140;CL:0000988!6.69e-21!182;CL:0000037!6.33e-20!172;CL:0000566!6.33e-20!172;CL:0002087!1.24e-17!119;CL:0002032!4.39e-17!165;CL:0000837!4.39e-17!165;CL:0002031!1.32e-16!124;CL:0002393!2.90e-14!9;CL:0002397!2.90e-14!9;CL:0000766!5.18e-14!76;CL:0000094!6.05e-14!8;CL:0000081!1.43e-12!11;CL:0000080!9.16e-12!6;CL:0000838!7.29e-11!52;CL:0000542!1.48e-10!53;CL:0000051!1.48e-10!53;CL:0000860!4.37e-10!45;CL:0000791!1.58e-09!18;CL:0000789!1.58e-09!18;CL:0002420!1.58e-09!18;CL:0002419!1.58e-09!18;CL:0000790!1.58e-09!18;CL:0000623!6.52e-08!3;CL:0000825!6.52e-08!3;CL:0000763!7.42e-08!112;CL:0000049!7.42e-08!112;CL:0000767!9.86e-08!3;CL:0002057!1.68e-07!42;CL:0000839!2.31e-07!70;CL:0000842!2.79e-07!3;CL:0000557!3.44e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.88e-51;8!CL:0000081;4.97e-37;11!CL:0000623;3.04e-26;3!CL:0000767;1.72e-25;3!CL:0002393;5.26e-22;6!CL:0002397;5.26e-22;6!CL:0000771;1.59e-18;2!CL:0000097;9.77e-16;5!CL:0000775;2.09e-12;3!CL:0000766;1.84e-11;69!CL:0000163;5.59e-09;9!CL:0000625;2.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.48e-51,8;CL:0000081,4.60e-37,11;CL:0000738,9.50e-29,136;CL:0000623,2.91e-26,3;CL:0000825,2.91e-26,3;CL:0000767,1.46e-25,3;CL:0000766,4.65e-23,72;CL:0000037,1.19e-22,168;CL:0002393,2.14e-22,9;CL:0002397,2.14e-22,9;CL:0002032,1.65e-21,161;CL:0000837,1.65e-21,161;CL:0000988,2.50e-21,177;CL:0000771,1.59e-18,2;CL:0000097,8.20e-16,5;CL:0002028,8.20e-16,5;CL:0000763,1.41e-14,108;CL:0000049,1.41e-14,108;CL:0002031,9.19e-13,120;CL:0000775,2.15e-12,3;CL:0002087,9.03e-10,115;CL:0000163,5.09e-09,9;CL:0000134,7.12e-09,354;CL:0002320,1.25e-08,361;CL:0000219,9.16e-08,386;CL:0000625,2.23e-07,11;CL:0000034,3.01e-07,441;CL:0000838,3.88e-07,52;CL:0000542,5.47e-07,53;CL:0000051,5.47e-07,53;CL:0000839,7.87e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.98e-14!15;UBERON:0000179!1.98e-14!15;UBERON:0000463!1.98e-14!15;UBERON:0002390!1.90e-13!102;UBERON:0003061!1.90e-13!102;UBERON:0002193!2.30e-12!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.70e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,8.26064981382698,1.53531759238885,1.23852898652861,0,0,0,0,0,0,1.10799081706375,1.40381113229099,2.60413044859022,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.564727018627814,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,1.05627643155971,0.212604299965044,0.209658645508376,0.44931452458598,0,0,1.14005097496499,0,0.547992461293902,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0.68725489096526,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,2.21767417547206,2.13952156626806,2.02754165435919,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,11.8602375692457,19.3890132074163,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14656231081544,1.8735593944205,4.03975786964416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,4.13764596424047,3.88129634747131,5.26206448746968,0,0,0,0,0,3.74503511973591,0,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.403100834920358,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:121030761..121030773,+ | |||
}} |
Revision as of 12:01, 10 September 2013
Short description: | p@chr10:121030761..121030773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:121030761..121030773, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.48e-51 | 8 |
blood cell | 4.60e-37 | 11 |
leukocyte | 9.50e-29 | 136 |
natural killer cell | 2.91e-26 | 3 |
pro-NK cell | 2.91e-26 | 3 |
basophil | 1.46e-25 | 3 |
myeloid leukocyte | 4.65e-23 | 72 |
hematopoietic stem cell | 1.19e-22 | 168 |
intermediate monocyte | 2.14e-22 | 9 |
CD14-positive, CD16-positive monocyte | 2.14e-22 | 9 |
hematopoietic oligopotent progenitor cell | 1.65e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-21 | 161 |
hematopoietic cell | 2.50e-21 | 177 |
eosinophil | 1.59e-18 | 2 |
mast cell | 8.20e-16 | 5 |
basophil mast progenitor cell | 8.20e-16 | 5 |
myeloid cell | 1.41e-14 | 108 |
common myeloid progenitor | 1.41e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 9.19e-13 | 120 |
neutrophil | 2.15e-12 | 3 |
nongranular leukocyte | 9.03e-10 | 115 |
endocrine cell | 5.09e-09 | 9 |
mesenchymal cell | 7.12e-09 | 354 |
connective tissue cell | 1.25e-08 | 361 |
motile cell | 9.16e-08 | 386 |
CD8-positive, alpha-beta T cell | 2.23e-07 | 11 |
stem cell | 3.01e-07 | 441 |
lymphoid lineage restricted progenitor cell | 3.88e-07 | 52 |
lymphocyte | 5.47e-07 | 53 |
common lymphoid progenitor | 5.47e-07 | 53 |
myeloid lineage restricted progenitor cell | 7.87e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.70e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.