FFCP PHASE1:Hg19::chr11:134094420..134094447,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23310|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28952|TSSclassifier=S|UniProt=E9PR72,E9PJM8,G3V1A9,P42695|association_with_transcript=0bp_to_ENST00000525485,ENST00000526422,ENST00000534532,NM_015261,uc001qhd.1,uc009zda.1,uc010scm.1_5end|description=CAGE_peak_2_at_NCAPD3_5end|id=chr11:134094420..134094447,-|ontology_enrichment_celltype=CL:0000542!3.91e-16!53;CL:0000051!3.91e-16!53;CL:0000838!5.14e-16!52;CL:0000084!3.58e-10!25;CL:0000827!3.58e-10!25;CL:0000037!4.28e-09!172;CL:0000566!4.28e-09!172;CL:0000791!4.07e-08!18;CL:0000789!4.07e-08!18;CL:0002420!4.07e-08!18;CL:0002419!4.07e-08!18;CL:0000790!4.07e-08!18;CL:0002032!6.95e-08!165;CL:0000837!6.95e-08!165;CL:0000988!7.27e-08!182;CL:0002087!1.73e-07!119;CL:0002031!2.30e-07!124;CL:0000738!6.34e-07!140|ontology_enrichment_celltype_v019=CL:0000542;2.48e-10;53!CL:0000084;2.79e-10;25!CL:0000791;2.28e-08;18!CL:0000789;2.28e-08;18!CL:0002419;2.28e-08;18|ontology_enrichment_celltype_v019_2=CL:0000542,2.74e-16,53;CL:0000051,2.74e-16,53;CL:0000838,3.64e-16,52;CL:0000084,3.10e-10,25;CL:0000827,3.10e-10,25;CL:0000037,4.65e-09,168;CL:0000988,3.18e-08,177;CL:0000791,3.97e-08,18;CL:0000789,3.97e-08,18;CL:0002420,3.97e-08,18;CL:0002419,3.97e-08,18;CL:0000790,3.97e-08,18;CL:0002032,7.91e-08,161;CL:0000837,7.91e-08,161;CL:0002087,4.42e-07,115;CL:0002031,7.38e-07,120|ontology_enrichment_development_v019=CL:0000051;2.48e-10;53!CL:0000790;2.28e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,5.77e-07,51;DOID:0060083,5.77e-07,51|ontology_enrichment_uberon=UBERON:0007023!1.51e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.49e-08,114|phase1_expression=1.63510541343501,3.8538094300377,1.69145284915165,2.00146596706261,0.446961094427288,0,0,0,3.65659879479774,0.737201809504527,0.697801167972428,1.52908960491121,0.263766978228454,0.247532705920093,1.65698687863958,2.01697543935533,0,0.730310090387373,0.975865597581014,1.23121058076788,1.83600622119828,1.56727360739044,0.572471974262113,1.09499540058307,1.12988375635323,3.05653622991805,3.36612416744778,2.12519109546934,1.96682138424452,3.45446458287491,2.01260960310899,4.59710612239464,0.6024118375565,1.47901604066715,2.01414721508784,3.12772311472327,1.17440175733939,2.76997704265939,1.60435557976113,3.68918480216948,1.11957737119962,1.94336199611388,2.83333124397605,1.30858414901608,1.88937971844405,2.42584061187816,0.697287110717054,2.05583944010913,1.85823822537062,0.28769239232215,0.512321413058201,0.709446689665756,0.689491361473237,0.645484683583826,0,1.31769637679823,1.09162460023138,1.57306439111559,0.612167784741805,1.60464513538047,0.639337125799041,0.659702600373432,0.997318288108159,1.70489900213078,0.870627715885752,0.56738522469114,2.4912889959823,0.502497330513487,1.5644487552606,0.434377689410233,0,0.736555271975129,0,2.5350634357433,1.91343869968539,2.09658645508376,2.80821577866238,2.70318407114711,1.44653028027372,3.70516566863623,1.79025009479181,2.19196984517561,7.03984977845291,3.27683166757279,4.44754626931777,7.25441378363062,6.4063357925762,2.87376219977242,3.96626923670917,2.86216126360609,4.55370375287559,4.69789751496751,4.20500550937752,1.32171328579026,2.24203425192614,1.31692042387539,6.68813218387032,6.28817220398664,6.16804496998528,1.5046784585161,8.14805666583976,8.04861269749047,1.94826728407911,2.33961959458865,4.41908861212256,3.32300841875432,4.60366568400527,1.79327847615945,2.08094956095805,1.97325485524411,5.52700035571697,2.89803085735052,6.3763222159686,6.1534390460634,10.4535523804977,1.92625882585863,6.89796888483458,4.12352934579156,6.57851199250707,3.50421955756506,4.55758417699493,3.8018081777935,3.76437797694432,4.73550461271348,6.24653632761729,3.78843603270427,0.821127996921047,5.04016858061831,3.7441627409691,6.80674698249155,0,0,0.383587685530591,2.1686349143074,2.50668955317945,2.31754430337318,3.1811437882044,2.91980922181582,1.60709189178915,2.21729397462564,1.84453049955565,4.45328856692223,1.45718115317017,0.741568885568859,1.29818957461873,2.43781632218974,1.19662164466979,3.33886874027479,4.57595928624102,6.3147775226026,1.39133685156694,0.860234595106124,0.347140501607594,1.13061588384802,0,1.37559020970034,1.04497483268405,1.55050055501597,3.20189636418039,1.33888245105868,0.805658634218294,1.52054421143703,1.46437234528902,1.10298924103761,0,1.16089646769304,0.22452937262617,1.12611480483322,0,0,0.366403487860815,2.63560834872127,0,1.3082821564276,2.98183171017191,0.886413581652058,1.58891016975863,1.14734648299525,3.19201543978521,0,1.06748995729705,2.22000793575444,0.933633106199299,1.88594940897563,0.980771418680752,3.63257826347835,1.72852777344,2.10889288650417,1.24864030732128,0.570471821544449,0.747243402759005,0.704606991862589,0.809364721840658,0.702254033511242,1.22492502752936,1.10550885580591,1.54988671763648,0,0.989067717114227,2.73048408581408,0,1.68336113954066,0.5004740794878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7187895,0.615976841137482,1.1598144313382,0,3.50909195193158,3.780064728066,1.18920090777569,1.35535298446752,1.97892930141772,6.94429080406698,1.85217979459067,0.874238242015829,1.88126918544609,3.18692818280077,2.59244201811789,3.53355240806901,4.1586496045792,2.113278637917,1.35941691750254,4.32326022707326,2.96506284678455,3.19811698959773,0.357107877211315,0.705789743431384,4.57375790128259,2.19100916473955,5.50475140085449,4.58686666084644,2.20880187070458,2.24371917630019,1.74540276136151,1.0580536810308,1.11598505450025,1.84870251452567,0.432626562123789,1.26166424835079,1.31118686356435,1.26698501011437,0.509944148709909,0.534434810531121,0.827054095813604,0.752122617877125,3.63737751447549,12.058385857028,4.1458471972939,5.48194878068045,0.639701945702943,2.3806443146374,2.1314340245882,2.23468971465088,4.1488789154827,2.92776928079559,3.03175783437329,1.08858373948481,0.342233301085281,1.81850543139386,1.86477734020959,1.33064142618405,0.89543595472072,0.960546112899439,0,4.58108530743593,0,1.4668973301944,2.03448089157869,3.32878387092756,2.41528552309231,1.9234109538194|short_description=p2@NCAPD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23310 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28952 | |||
|TSSclassifier=S | |||
|UniProt=E9PR72,E9PJM8,G3V1A9,P42695 | |||
|association_with_transcript=0bp_to_ENST00000525485,ENST00000526422,ENST00000534532,NM_015261,uc001qhd.1,uc009zda.1,uc010scm.1_5end | |||
|description=CAGE_peak_2_at_NCAPD3_5end | |||
|id=chr11:134094420..134094447,- | |||
|ontology_enrichment_celltype=CL:0000542!3.91e-16!53;CL:0000051!3.91e-16!53;CL:0000838!5.14e-16!52;CL:0000084!3.58e-10!25;CL:0000827!3.58e-10!25;CL:0000037!4.28e-09!172;CL:0000566!4.28e-09!172;CL:0000791!4.07e-08!18;CL:0000789!4.07e-08!18;CL:0002420!4.07e-08!18;CL:0002419!4.07e-08!18;CL:0000790!4.07e-08!18;CL:0002032!6.95e-08!165;CL:0000837!6.95e-08!165;CL:0000988!7.27e-08!182;CL:0002087!1.73e-07!119;CL:0002031!2.30e-07!124;CL:0000738!6.34e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.48e-10;53!CL:0000084;2.79e-10;25!CL:0000791;2.28e-08;18!CL:0000789;2.28e-08;18!CL:0002419;2.28e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.74e-16,53;CL:0000051,2.74e-16,53;CL:0000838,3.64e-16,52;CL:0000084,3.10e-10,25;CL:0000827,3.10e-10,25;CL:0000037,4.65e-09,168;CL:0000988,3.18e-08,177;CL:0000791,3.97e-08,18;CL:0000789,3.97e-08,18;CL:0002420,3.97e-08,18;CL:0002419,3.97e-08,18;CL:0000790,3.97e-08,18;CL:0002032,7.91e-08,161;CL:0000837,7.91e-08,161;CL:0002087,4.42e-07,115;CL:0002031,7.38e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.48e-10;53!CL:0000790;2.28e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.77e-07,51;DOID:0060083,5.77e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.49e-08,114 | |||
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| |||
|short_description=p2@NCAPD3 | |||
}} |
Revision as of 16:46, 10 September 2013
Short description: | p2@NCAPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NCAPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525485, ENST00000526422, ENST00000534532, NM_015261, uc001qhd.1, uc009zda.1, uc010scm.1_5end |
EntrezGene: | NCAPD3 |
HGNC: | 28952 |
UniProt: | E9PR72E9PJM8G3V1A9P42695 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.74e-16 | 53 |
common lymphoid progenitor | 2.74e-16 | 53 |
lymphoid lineage restricted progenitor cell | 3.64e-16 | 52 |
T cell | 3.10e-10 | 25 |
pro-T cell | 3.10e-10 | 25 |
hematopoietic stem cell | 4.65e-09 | 168 |
hematopoietic cell | 3.18e-08 | 177 |
mature alpha-beta T cell | 3.97e-08 | 18 |
alpha-beta T cell | 3.97e-08 | 18 |
immature T cell | 3.97e-08 | 18 |
mature T cell | 3.97e-08 | 18 |
immature alpha-beta T cell | 3.97e-08 | 18 |
hematopoietic oligopotent progenitor cell | 7.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.91e-08 | 161 |
nongranular leukocyte | 4.42e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.38e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.49e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.77e-07 | 51 |
immune system cancer | 5.77e-07 | 51 |
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