FFCP PHASE1:Hg19::chr12:4409051..4409087,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=894|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=1583|TSSclassifier=N|UniProt=|association_with_transcript=-178bp_to_BX647508_5end|coexpression_cluster_id=C539|description=CAGE_peak_7_at_CCND2_5end|id=chr12:4409051..4409087,+|ontology_enrichment_celltype=CL:0002159!6.95e-07!13|ontology_enrichment_celltype_v019=CL:0002144;1.21e-09;3!CL:0000317;1.62e-07;2!CL:1000448;1.62e-07;2!CL:0002308;1.62e-07;2!CL:0002140;1.62e-07;2!CL:0002159;2.81e-07;14|ontology_enrichment_celltype_v019_2=CL:0002144,1.03e-09,3;CL:0000317,1.49e-07,2;CL:1000448,1.49e-07,2;CL:0002308,1.49e-07,2;CL:0002140,1.49e-07,2;CL:0002159,2.79e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0010523;1.21e-09;3!UBERON:0001915;1.21e-09;3!UBERON:0001982;1.21e-09;3!UBERON:0000922;7.27e-08;49!UBERON:0002419;1.62e-07;2!UBERON:0007771;1.62e-07;2!UBERON:0003297;1.62e-07;2!UBERON:0001821;1.62e-07;2!UBERON:0003487;1.62e-07;2!UBERON:0001820;1.62e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.03e-09,3;UBERON:0001915,1.03e-09,3;UBERON:0001982,1.03e-09,3;UBERON:0002419,1.49e-07,2;UBERON:0007771,1.49e-07,2;UBERON:0003297,1.49e-07,2;UBERON:0001821,1.49e-07,2;UBERON:0003487,1.49e-07,2;UBERON:0001820,1.49e-07,2;UBERON:0005089,1.49e-07,2;UBERON:0005088,1.49e-07,2|phase1_expression=0,0,0.140954404095971,0,0,0,0,1.26343974685366,0,0,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,1.06978768047132,1.31360943119913,1.57421562627358,0,0,0,0.919421224478927,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,1.23350366406548,0.309706370895104,0,0.256160706529101,0,0,1.93645405075148,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0,0.473447805734733,1.94826728407911,0.668462741311041,0.294605907474837,0.443067789167242,0,1.15282187753108,1.04047478047903,0.164437904603676,0.552700035571697,0.579606171470105,0.296573126324121,0,0,0.679856056185397,0,0,0,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.403213486449465,1.06976078313403,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0,1.03366703667732,1.06729878806013,0.66944122552934,2.41697590265488,1.52054421143703,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,1.72082757233402,0.731842236777572,0.132529768321485,0.580969714347592,0.518305275076852,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,2.41450627898976,1.1240175325762,0.502644862058154,2.31471112896324,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0.93733833986777,1.17587489739202,1.70130116690864,0.447792613514241,1.16253575405585,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,2.49932477955143,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.896681151948218,0.591092280605782,0.215627574859517,0.256686072559497,1.52456774533478,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.431428401637234,0,0,3.32870879020994,0.907170879989041,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0.116210378459959,0,3.40860999515584,0.920809889358963,0,0,0,0.902399225814824,0.462092022626489,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,2.60024098414608,0,0.386682873168488,0,0.15350367472613,0.551346289938122,0.107420244868274,0.290033387828457,0.0852266274161009,0.267096106940212,1.81813406897076,0.384380134730212,0,0.4046311234222,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0,0.707027159768564,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0.0941438007767792,0,0,0,1.1486170010348,0,0,0,0,0,0,0.540031437238115,0,0.427296284509893,0,0,0,0,0,0,0,0,1.90506224451495,0.324621940274555,0,0,0.783399478865116,0,0.846458889008016,0,0,0,1.03051603426729,0,0,0,0,0,0,0.540911356951966,1.6653598399891,0,0.561421621224659,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=1583 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-178bp_to_BX647508_5end | |||
|coexpression_cluster_id=C539 | |||
|description=CAGE_peak_7_at_CCND2_5end | |||
|id=chr12:4409051..4409087,+ | |||
|ontology_enrichment_celltype=CL:0002159!6.95e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.21e-09;3!CL:0000317;1.62e-07;2!CL:1000448;1.62e-07;2!CL:0002308;1.62e-07;2!CL:0002140;1.62e-07;2!CL:0002159;2.81e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.03e-09,3;CL:0000317,1.49e-07,2;CL:1000448,1.49e-07,2;CL:0002308,1.49e-07,2;CL:0002140,1.49e-07,2;CL:0002159,2.79e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.21e-09;3!UBERON:0001915;1.21e-09;3!UBERON:0001982;1.21e-09;3!UBERON:0000922;7.27e-08;49!UBERON:0002419;1.62e-07;2!UBERON:0007771;1.62e-07;2!UBERON:0003297;1.62e-07;2!UBERON:0001821;1.62e-07;2!UBERON:0003487;1.62e-07;2!UBERON:0001820;1.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.03e-09,3;UBERON:0001915,1.03e-09,3;UBERON:0001982,1.03e-09,3;UBERON:0002419,1.49e-07,2;UBERON:0007771,1.49e-07,2;UBERON:0003297,1.49e-07,2;UBERON:0001821,1.49e-07,2;UBERON:0003487,1.49e-07,2;UBERON:0001820,1.49e-07,2;UBERON:0005089,1.49e-07,2;UBERON:0005088,1.49e-07,2 | |||
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| |||
|short_description=p7@CCND2 | |||
}} |
Revision as of 22:38, 10 September 2013
Short description: | p7@CCND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CCND2_5end |
Coexpression cluster: | C539_teratocarcinoma_diffuse_Gingival_Placental_lymphangiectasia_mycosis_Sebocyte |
Association with transcript: | -178bp_to_BX647508_5end |
EntrezGene: | CCND2 |
HGNC: | 1583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.03e-09 | 3 |
sebum secreting cell | 1.49e-07 | 2 |
epithelial cell of sweat gland | 1.49e-07 | 2 |
epithelial cell of skin gland | 1.49e-07 | 2 |
acinar cell of sebaceous gland | 1.49e-07 | 2 |
general ecto-epithelial cell | 2.79e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.03e-09 | 3 |
endothelium of capillary | 1.03e-09 | 3 |
capillary | 1.03e-09 | 3 |
skin gland | 1.49e-07 | 2 |
epidermis gland | 1.49e-07 | 2 |
gland of integumental system | 1.49e-07 | 2 |
sebaceous gland | 1.49e-07 | 2 |
skin sebaceous gland | 1.49e-07 | 2 |
sweat gland | 1.49e-07 | 2 |
sweat gland placode | 1.49e-07 | 2 |
sebaceous gland placode | 1.49e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.