FFCP PHASE1:Hg19::chr12:9144805..9144867,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10219|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6380|TSSclassifier=W|UniProt=F5H8E3|association_with_transcript=139bp_to_ENST00000543895_5end|coexpression_cluster_id=C662|description=CAGE_peak_3_at_KLRG1_5end|id=chr12:9144805..9144867,+|ontology_enrichment_celltype=CL:0000037!6.73e-21!172;CL:0000566!6.73e-21!172;CL:0000988!7.59e-19!182;CL:0002032!1.87e-18!165;CL:0000837!1.87e-18!165;CL:0000791!1.14e-17!18;CL:0000789!1.14e-17!18;CL:0002420!1.14e-17!18;CL:0002419!1.14e-17!18;CL:0000790!1.14e-17!18;CL:0000738!3.77e-14!140;CL:0000625!2.41e-13!11;CL:0000084!6.73e-12!25;CL:0000827!6.73e-12!25;CL:0000763!2.47e-11!112;CL:0000049!2.47e-11!112;CL:0002031!1.39e-10!124;CL:0002087!3.70e-10!119;CL:0000838!1.13e-07!52;CL:0000624!2.15e-07!6;CL:0000542!2.22e-07!53;CL:0000051!2.22e-07!53;CL:0000766!3.10e-07!76;CL:0002274!5.16e-07!5;CL:0000457!5.16e-07!5;CL:0002191!5.16e-07!5;CL:0000097!5.16e-07!5;CL:0000831!5.16e-07!5;CL:0002028!5.16e-07!5|ontology_enrichment_celltype_v019=CL:0000791;1.38e-28;18!CL:0000789;1.38e-28;18!CL:0002419;1.38e-28;18!CL:0000625;5.29e-21;11!CL:0000084;4.66e-19;25!CL:0000624;3.20e-11;6!CL:0000097;1.46e-10;5!CL:0000235;1.64e-07;6!CL:0000623;2.42e-07;3!CL:0000094;3.46e-07;8!CL:0000226;5.79e-07;3!CL:0000842;5.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,1.39e-28,18;CL:0000789,1.39e-28,18;CL:0002420,1.39e-28,18;CL:0002419,1.39e-28,18;CL:0000790,1.39e-28,18;CL:0000037,7.04e-26,168;CL:0000988,1.18e-23,177;CL:0002032,7.82e-23,161;CL:0000837,7.82e-23,161;CL:0000625,5.06e-21,11;CL:0000084,4.67e-19,25;CL:0000827,4.67e-19,25;CL:0000738,1.77e-17,136;CL:0000763,3.01e-12,108;CL:0000049,3.01e-12,108;CL:0002031,3.26e-12,120;CL:0002087,2.99e-11,115;CL:0000624,3.35e-11,6;CL:0000838,3.83e-11,52;CL:0000542,8.08e-11,53;CL:0000051,8.08e-11,53;CL:0000097,1.42e-10,5;CL:0002028,1.42e-10,5;CL:0000235,1.66e-07,6;CL:0000623,2.42e-07,3;CL:0000825,2.42e-07,3;CL:0000094,3.09e-07,8;CL:0000766,4.30e-07,72;CL:0000226,5.85e-07,3;CL:0000842,5.85e-07,3|ontology_enrichment_development_v019=CL:0000790;1.38e-28;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:8692,9.83e-07,31|ontology_enrichment_uberon=UBERON:0007023!7.27e-16!115;UBERON:0002390!2.68e-11!102;UBERON:0003061!2.68e-11!102;UBERON:0002193!6.51e-11!112;UBERON:0000178!2.37e-09!15;UBERON:0000179!2.37e-09!15;UBERON:0000463!2.37e-09!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-15;15!UBERON:0000179;2.78e-15;15!UBERON:0000463;2.78e-15;15!UBERON:0002390;1.47e-12;32!UBERON:0002193;2.91e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.41e-15,15;UBERON:0000179,2.41e-15,15;UBERON:0000463,2.41e-15,15;UBERON:0002390,7.47e-14,98;UBERON:0003061,7.47e-14,98;UBERON:0002193,1.89e-13,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,29.5548636534854,2.94150634300544,0,0,0,0,0,8.22081230137572,7.20194031091441,13.8375668754398,7.16135873362311,2.91090116511902,15.546895968911,8.49999373192816,0.145398238779565,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0.368277635987565,0.632924774881769,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,5.28685314316103,8.96813700770458,4.21414535640123,16.3269109194481,12.5763444079733,5.14003747498773,11.8702411727381,10.1035902656413,2.36723902867367,1.94826728407911,1.78256731016278,2.65145316727353,3.54454231333794,2.97884250141517,2.43373507478783,4.42201781703586,7.5641436117691,6.07970039128866,19.7066098299836,5.78317596332036,3.21048993707656,3.1360657141493,8.3848913596199,15.3288197440768,42.6098032398461,45.290524871491,7.64556994377832,9.76625180784628,10.4549724889321,16.563263098555,28.0290678428176,19.9889162483753,12.3124171062889,14.7803039445788,81.4491242627919,79.9646185392687,23.751202236779,0,0,0,0,0,0,0,0,0,0,0.527008714158756,0.654895377488563,0,0,0.649094787309367,0.870648686496336,0.531831842075461,0,0,0.371457501329565,0.79504962946682,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,2.50039239195423,1.12264686313085,0.788280363383256,0,0,0.366403487860815,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40164215827233,0.936017060556951,2.52672975890838,0,0.16798212819886,0,0,0,0,47.2956708380106,39.9739890420046,15.7569367810987,10.6648765528551,13.634182810049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8922805154143,6.02708509718552,4.21667878966063,0,0,0,0,0,0,0,62.0646894636071,65.1195276075742,34.1392476504131,0,0,0,0,0,0,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.872388911102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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6380 | |||
|TSSclassifier=W | |||
|UniProt=F5H8E3 | |||
|association_with_transcript=139bp_to_ENST00000543895_5end | |||
|coexpression_cluster_id=C662 | |||
|description=CAGE_peak_3_at_KLRG1_5end | |||
|id=chr12:9144805..9144867,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.73e-21!172;CL:0000566!6.73e-21!172;CL:0000988!7.59e-19!182;CL:0002032!1.87e-18!165;CL:0000837!1.87e-18!165;CL:0000791!1.14e-17!18;CL:0000789!1.14e-17!18;CL:0002420!1.14e-17!18;CL:0002419!1.14e-17!18;CL:0000790!1.14e-17!18;CL:0000738!3.77e-14!140;CL:0000625!2.41e-13!11;CL:0000084!6.73e-12!25;CL:0000827!6.73e-12!25;CL:0000763!2.47e-11!112;CL:0000049!2.47e-11!112;CL:0002031!1.39e-10!124;CL:0002087!3.70e-10!119;CL:0000838!1.13e-07!52;CL:0000624!2.15e-07!6;CL:0000542!2.22e-07!53;CL:0000051!2.22e-07!53;CL:0000766!3.10e-07!76;CL:0002274!5.16e-07!5;CL:0000457!5.16e-07!5;CL:0002191!5.16e-07!5;CL:0000097!5.16e-07!5;CL:0000831!5.16e-07!5;CL:0002028!5.16e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.38e-28;18!CL:0000789;1.38e-28;18!CL:0002419;1.38e-28;18!CL:0000625;5.29e-21;11!CL:0000084;4.66e-19;25!CL:0000624;3.20e-11;6!CL:0000097;1.46e-10;5!CL:0000235;1.64e-07;6!CL:0000623;2.42e-07;3!CL:0000094;3.46e-07;8!CL:0000226;5.79e-07;3!CL:0000842;5.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.39e-28,18;CL:0000789,1.39e-28,18;CL:0002420,1.39e-28,18;CL:0002419,1.39e-28,18;CL:0000790,1.39e-28,18;CL:0000037,7.04e-26,168;CL:0000988,1.18e-23,177;CL:0002032,7.82e-23,161;CL:0000837,7.82e-23,161;CL:0000625,5.06e-21,11;CL:0000084,4.67e-19,25;CL:0000827,4.67e-19,25;CL:0000738,1.77e-17,136;CL:0000763,3.01e-12,108;CL:0000049,3.01e-12,108;CL:0002031,3.26e-12,120;CL:0002087,2.99e-11,115;CL:0000624,3.35e-11,6;CL:0000838,3.83e-11,52;CL:0000542,8.08e-11,53;CL:0000051,8.08e-11,53;CL:0000097,1.42e-10,5;CL:0002028,1.42e-10,5;CL:0000235,1.66e-07,6;CL:0000623,2.42e-07,3;CL:0000825,2.42e-07,3;CL:0000094,3.09e-07,8;CL:0000766,4.30e-07,72;CL:0000226,5.85e-07,3;CL:0000842,5.85e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.38e-28;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.83e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.27e-16!115;UBERON:0002390!2.68e-11!102;UBERON:0003061!2.68e-11!102;UBERON:0002193!6.51e-11!112;UBERON:0000178!2.37e-09!15;UBERON:0000179!2.37e-09!15;UBERON:0000463!2.37e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-15;15!UBERON:0000179;2.78e-15;15!UBERON:0000463;2.78e-15;15!UBERON:0002390;1.47e-12;32!UBERON:0002193;2.91e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.41e-15,15;UBERON:0000179,2.41e-15,15;UBERON:0000463,2.41e-15,15;UBERON:0002390,7.47e-14,98;UBERON:0003061,7.47e-14,98;UBERON:0002193,1.89e-13,108 | |||
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| |||
|short_description=p3@KLRG1 | |||
}} |
Revision as of 00:55, 11 September 2013
Short description: | p3@KLRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KLRG1_5end |
Coexpression cluster: | C662_Mast_CD8_Natural_Basophils_CD4_Peripheral_Dendritic |
Association with transcript: | 139bp_to_ENST00000543895_5end |
EntrezGene: | KLRG1 |
HGNC: | 6380 |
UniProt: | F5H8E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.39e-28 | 18 |
alpha-beta T cell | 1.39e-28 | 18 |
immature T cell | 1.39e-28 | 18 |
mature T cell | 1.39e-28 | 18 |
immature alpha-beta T cell | 1.39e-28 | 18 |
hematopoietic stem cell | 7.04e-26 | 168 |
hematopoietic cell | 1.18e-23 | 177 |
hematopoietic oligopotent progenitor cell | 7.82e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.82e-23 | 161 |
CD8-positive, alpha-beta T cell | 5.06e-21 | 11 |
T cell | 4.67e-19 | 25 |
pro-T cell | 4.67e-19 | 25 |
leukocyte | 1.77e-17 | 136 |
myeloid cell | 3.01e-12 | 108 |
common myeloid progenitor | 3.01e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 3.26e-12 | 120 |
nongranular leukocyte | 2.99e-11 | 115 |
CD4-positive, alpha-beta T cell | 3.35e-11 | 6 |
lymphoid lineage restricted progenitor cell | 3.83e-11 | 52 |
lymphocyte | 8.08e-11 | 53 |
common lymphoid progenitor | 8.08e-11 | 53 |
mast cell | 1.42e-10 | 5 |
basophil mast progenitor cell | 1.42e-10 | 5 |
macrophage | 1.66e-07 | 6 |
natural killer cell | 2.42e-07 | 3 |
pro-NK cell | 2.42e-07 | 3 |
granulocyte | 3.09e-07 | 8 |
myeloid leukocyte | 4.30e-07 | 72 |
single nucleate cell | 5.85e-07 | 3 |
mononuclear cell | 5.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.41e-15 | 15 |
haemolymphatic fluid | 2.41e-15 | 15 |
organism substance | 2.41e-15 | 15 |
hematopoietic system | 7.47e-14 | 98 |
blood island | 7.47e-14 | 98 |
hemolymphoid system | 1.89e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.83e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.