FFCP PHASE1:Hg19::chr1:216978721..216978728,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2104|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3474|TSSclassifier=N|UniProt=F1D8R6,P62508|association_with_transcript=-12bp_to_ENST00000360012,NM_001243514_5end|coexpression_cluster_id=C31|description=CAGE_peak_13_at_ESRRG_5end|id=chr1:216978721..216978728,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004874;8.57e-14;1!UBERON:0006298;1.61e-13;1!UBERON:0008814;1.05e-07;2!UBERON:0010056;1.05e-07;2!UBERON:0007297;2.12e-07;2|ontology_enrichment_disease=DOID:114!1.44e-13!2;DOID:178!1.91e-07!1;DOID:326!1.91e-07!1;DOID:3978!1.91e-07!1;DOID:3394!1.91e-07!1;DOID:5844!1.91e-07!1;DOID:1287!3.28e-07!4;DOID:5409!7.08e-07!4|ontology_enrichment_disease_v019=DOID:114;1.70e-07;2|ontology_enrichment_disease_v019_2=DOID:114,1.75e-07,2|ontology_enrichment_uberon=UBERON:0000341!2.37e-14!2;UBERON:0003127!8.65e-14!2;UBERON:0007023!2.71e-12!115;UBERON:0008814!1.72e-10!15;UBERON:0001042!2.21e-10!10;UBERON:0009145!2.21e-10!10;UBERON:0001723!7.36e-10!3;UBERON:0001033!7.36e-10!3;UBERON:0010056!7.36e-10!3;UBERON:0006562!1.90e-09!11;UBERON:0002426!4.57e-08!1;UBERON:0003831!4.57e-08!1;UBERON:0003898!4.57e-08!1;UBERON:0004830!4.57e-08!1;UBERON:0001774!4.57e-08!1;UBERON:0003830!4.57e-08!1;UBERON:0005175!4.57e-08!1;UBERON:0003897!4.57e-08!1;UBERON:0001103!4.57e-08!1;UBERON:0010084!4.57e-08!1;UBERON:0000989!7.26e-08!1;UBERON:0008811!7.26e-08!1;UBERON:0006258!7.26e-08!1;UBERON:0005876!7.26e-08!1;UBERON:0004874!7.26e-08!1;UBERON:0007029!8.84e-08!1;UBERON:0001736!9.44e-08!1;UBERON:0006298!9.44e-08!1;UBERON:0002135!1.01e-07!1;UBERON:0001301!1.15e-07!1;UBERON:0002372!1.39e-07!1;UBERON:0001961!1.39e-07!1;UBERON:0001744!1.39e-07!1;UBERON:0001735!1.39e-07!1;UBERON:0000072!1.46e-07!46;UBERON:0003103!1.84e-07!69;UBERON:0001004!4.99e-07!72|ontology_enrichment_uberon_v019=UBERON:0000341;2.02e-26;2!UBERON:0001723;5.99e-18;3!UBERON:0001033;5.99e-18;3!UBERON:0002426;3.50e-14;1!UBERON:0003831;3.50e-14;1!UBERON:0003898;3.50e-14;1!UBERON:0004830;3.50e-14;1!UBERON:0003830;3.50e-14;1!UBERON:0005175;3.50e-14;1!UBERON:0001774;3.50e-14;1!UBERON:0001103;3.50e-14;1!UBERON:0000989;8.57e-14;1!UBERON:0008811;8.57e-14;1!UBERON:0007029;1.61e-13;1!UBERON:0001736;1.61e-13;1!UBERON:0002135;1.61e-13;1!UBERON:0001301;1.61e-13;1!UBERON:0000974;1.87e-09;6!UBERON:0005090;9.86e-08;2!UBERON:0001630;9.86e-08;2!UBERON:0001134;1.09e-07;16!UBERON:0002036;1.09e-07;16!UBERON:0000922;1.35e-07;49!UBERON:0003127;1.36e-07;2!UBERON:0001829;2.12e-07;2!UBERON:0002133;2.12e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.16e-26,2;UBERON:0001723,5.99e-18,3;UBERON:0001033,5.99e-18,3;UBERON:0010056,5.99e-18,3;UBERON:0002426,3.50e-14,1;UBERON:0003831,3.50e-14,1;UBERON:0003898,3.50e-14,1;UBERON:0004830,3.50e-14,1;UBERON:0003830,3.50e-14,1;UBERON:0005175,3.50e-14,1;UBERON:0001774,3.50e-14,1;UBERON:0001103,3.50e-14,1;UBERON:0010084,3.50e-14,1;UBERON:0000989,8.58e-14,1;UBERON:0008811,8.58e-14,1;UBERON:0006258,8.58e-14,1;UBERON:0005876,8.58e-14,1;UBERON:0004874,8.58e-14,1;UBERON:0007029,1.25e-13,1;UBERON:0001736,1.42e-13,1;UBERON:0006298,1.42e-13,1;UBERON:0002135,1.61e-13,1;UBERON:0001301,2.07e-13,1;UBERON:0005090,9.87e-08,2;UBERON:0001630,9.87e-08,2;UBERON:0003127,1.36e-07,2;UBERON:0001829,1.99e-07,2;UBERON:0002133,2.12e-07,2;UBERON:0008814,7.09e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4463976513782,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.581934098930517,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0,0,0.399358000997982,2.14613024068285,0.446342914883745,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3474 | |||
|TSSclassifier=N | |||
|UniProt=F1D8R6,P62508 | |||
|association_with_transcript=-12bp_to_ENST00000360012,NM_001243514_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_13_at_ESRRG_5end | |||
|id=chr1:216978721..216978728,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.57e-14;1!UBERON:0006298;1.61e-13;1!UBERON:0008814;1.05e-07;2!UBERON:0010056;1.05e-07;2!UBERON:0007297;2.12e-07;2 | |||
|ontology_enrichment_disease=DOID:114!1.44e-13!2;DOID:178!1.91e-07!1;DOID:326!1.91e-07!1;DOID:3978!1.91e-07!1;DOID:3394!1.91e-07!1;DOID:5844!1.91e-07!1;DOID:1287!3.28e-07!4;DOID:5409!7.08e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!2.37e-14!2;UBERON:0003127!8.65e-14!2;UBERON:0007023!2.71e-12!115;UBERON:0008814!1.72e-10!15;UBERON:0001042!2.21e-10!10;UBERON:0009145!2.21e-10!10;UBERON:0001723!7.36e-10!3;UBERON:0001033!7.36e-10!3;UBERON:0010056!7.36e-10!3;UBERON:0006562!1.90e-09!11;UBERON:0002426!4.57e-08!1;UBERON:0003831!4.57e-08!1;UBERON:0003898!4.57e-08!1;UBERON:0004830!4.57e-08!1;UBERON:0001774!4.57e-08!1;UBERON:0003830!4.57e-08!1;UBERON:0005175!4.57e-08!1;UBERON:0003897!4.57e-08!1;UBERON:0001103!4.57e-08!1;UBERON:0010084!4.57e-08!1;UBERON:0000989!7.26e-08!1;UBERON:0008811!7.26e-08!1;UBERON:0006258!7.26e-08!1;UBERON:0005876!7.26e-08!1;UBERON:0004874!7.26e-08!1;UBERON:0007029!8.84e-08!1;UBERON:0001736!9.44e-08!1;UBERON:0006298!9.44e-08!1;UBERON:0002135!1.01e-07!1;UBERON:0001301!1.15e-07!1;UBERON:0002372!1.39e-07!1;UBERON:0001961!1.39e-07!1;UBERON:0001744!1.39e-07!1;UBERON:0001735!1.39e-07!1;UBERON:0000072!1.46e-07!46;UBERON:0003103!1.84e-07!69;UBERON:0001004!4.99e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.02e-26;2!UBERON:0001723;5.99e-18;3!UBERON:0001033;5.99e-18;3!UBERON:0002426;3.50e-14;1!UBERON:0003831;3.50e-14;1!UBERON:0003898;3.50e-14;1!UBERON:0004830;3.50e-14;1!UBERON:0003830;3.50e-14;1!UBERON:0005175;3.50e-14;1!UBERON:0001774;3.50e-14;1!UBERON:0001103;3.50e-14;1!UBERON:0000989;8.57e-14;1!UBERON:0008811;8.57e-14;1!UBERON:0007029;1.61e-13;1!UBERON:0001736;1.61e-13;1!UBERON:0002135;1.61e-13;1!UBERON:0001301;1.61e-13;1!UBERON:0000974;1.87e-09;6!UBERON:0005090;9.86e-08;2!UBERON:0001630;9.86e-08;2!UBERON:0001134;1.09e-07;16!UBERON:0002036;1.09e-07;16!UBERON:0000922;1.35e-07;49!UBERON:0003127;1.36e-07;2!UBERON:0001829;2.12e-07;2!UBERON:0002133;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.16e-26,2;UBERON:0001723,5.99e-18,3;UBERON:0001033,5.99e-18,3;UBERON:0010056,5.99e-18,3;UBERON:0002426,3.50e-14,1;UBERON:0003831,3.50e-14,1;UBERON:0003898,3.50e-14,1;UBERON:0004830,3.50e-14,1;UBERON:0003830,3.50e-14,1;UBERON:0005175,3.50e-14,1;UBERON:0001774,3.50e-14,1;UBERON:0001103,3.50e-14,1;UBERON:0010084,3.50e-14,1;UBERON:0000989,8.58e-14,1;UBERON:0008811,8.58e-14,1;UBERON:0006258,8.58e-14,1;UBERON:0005876,8.58e-14,1;UBERON:0004874,8.58e-14,1;UBERON:0007029,1.25e-13,1;UBERON:0001736,1.42e-13,1;UBERON:0006298,1.42e-13,1;UBERON:0002135,1.61e-13,1;UBERON:0001301,2.07e-13,1;UBERON:0005090,9.87e-08,2;UBERON:0001630,9.87e-08,2;UBERON:0003127,1.36e-07,2;UBERON:0001829,1.99e-07,2;UBERON:0002133,2.12e-07,2;UBERON:0008814,7.09e-07,18 | |||
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|short_description=p13@ESRRG | |||
}} |
Revision as of 03:39, 12 September 2013
Short description: | p13@ESRRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_ESRRG_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -12bp_to_ENST00000360012, NM_001243514_5end |
EntrezGene: | ESRRG |
HGNC: | 3474 |
UniProt: | F1D8R6P62508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 2.16e-26 | 2 |
tongue | 5.99e-18 | 3 |
gustatory system | 5.99e-18 | 3 |
future tongue | 5.99e-18 | 3 |
chest muscle | 3.50e-14 | 1 |
respiratory system muscle | 3.50e-14 | 1 |
skeletal muscle of trunk | 3.50e-14 | 1 |
respiratory system skeletal muscle | 3.50e-14 | 1 |
thoracic segment muscle | 3.50e-14 | 1 |
chest organ | 3.50e-14 | 1 |
muscle of trunk | 3.50e-14 | 1 |
diaphragm | 3.50e-14 | 1 |
future diaphragm | 3.50e-14 | 1 |
penis | 8.58e-14 | 1 |
intromittent organ | 8.58e-14 | 1 |
lateral plate mesenchyme | 8.58e-14 | 1 |
undifferentiated genital tubercle | 8.58e-14 | 1 |
somatopleure | 8.58e-14 | 1 |
surface | 1.25e-13 | 1 |
submandibular gland | 1.42e-13 | 1 |
submandibular gland primordium | 1.42e-13 | 1 |
mitral valve | 1.61e-13 | 1 |
epididymis | 2.07e-13 | 1 |
muscle structure | 9.87e-08 | 2 |
muscle organ | 9.87e-08 | 2 |
open tracheal system trachea | 1.36e-07 | 2 |
major salivary gland | 1.99e-07 | 2 |
atrioventricular valve | 2.12e-07 | 2 |
pharyngeal arch system | 7.09e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.75e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.