FFCP PHASE1:Hg19::chr1:21766588..21766637,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84224|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25076|TSSclassifier=S|UniProt=Q9H094,E7EM87,Q3BBW0,B3KTI0|association_with_transcript=0bp_to_ENST00000318220,ENST00000318249,ENST00000417552,ENST00000454000,ENST00000475869,ENST00000478653,NM_032264,uc001ber.2,uc001bes.2,uc009vqb.2,uc010odm.1_5end|description=CAGE_peak_1_at_NBPF3_5end|id=chr1:21766588..21766637,+|ontology_enrichment_celltype=CL:0000055!3.20e-09!180;CL:0000057!8.29e-07!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!7.89e-08!365;UBERON:0003102!3.38e-07!95;UBERON:0000924!9.57e-07!173;UBERON:0006601!9.57e-07!173|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.908391896352783,2.14100523890983,1.69145284915165,2.00146596706261,2.68176656656373,0.872338524100369,2.53299878168311,0.631719873426831,3.65659879479774,1.96587149201207,0.697801167972428,2.18441372130172,0.527533956456907,1.60896258848061,2.31978163009541,1.34465029290355,3.01347264011988,0.730310090387373,1.95173119516203,3.0780264519197,2.65200898617529,1.88072832886853,1.43117993565528,2.18999080116615,2.25976751270645,1.52826811495903,1.31360943119913,1.02324015707783,1.18009283054671,1.91914699048606,2.01260960310899,0.919421224478927,1.50602959389125,3.32778609150109,2.40148321798935,4.54941543959749,1.17440175733939,0,1.00272223735071,0.868043482863407,1.34349284543955,1.94336199611388,0.257575567634187,1.01778767145695,0.755751887377619,0.727752183563449,0.232429036905685,0.822335776043652,0,0,0.768482119587302,0,0,0,1.35426486594342,0.752969358170419,0,0.449446968890169,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0,0.91332076882317,0,1.09227722252426,1.77901850772711,2.13365111283254,1.20118796110804,2.29900975981793,0,1.90810750907073,0,1.76171156811282,1.52909291250092,0,0.560508562981536,2.10707267820062,1.37696839079683,0.393010762749165,0.616804496998528,1.00311897234407,1.95553359980154,1.4203434172042,3.89653456815823,1.00269411196656,1.17842362989935,0.221533894583621,0.270803863765016,0.896639238079726,1.04047478047903,0,0.276350017785848,0.289803085735052,3.26230438956533,2.40786745280742,2.09071047609954,0.339928028092699,0.383220493601921,1.03088233644789,1.51811815211702,2.22995790026868,1.95325036156926,0.950452044448374,3.61380285786655,2.55973222308837,1.24930726552346,1.89421801635213,4.92676798152628,1.61285394579786,2.13952156626806,1.88271725047639,4.87613732627923,2.01210257911091,1.79007586580942,1.44575660953827,1.00267582127178,1.01392563272577,0.795285947051099,0.486634870302636,1.98523116044542,1.33037638477538,1.22968699970376,4.06035134042909,2.18577172975525,4.07862887062872,0.324547393654683,1.21890816109487,0.26591592103773,0.238490624305342,0,0,0.596287222100115,0.860234595106124,1.38856200643038,0,0.838998872419812,1.10047216776027,0.417989933073621,1.03366703667732,0.35576626268671,0,0.805658634218294,0.760272105718513,1.70843440283719,2.57364156242108,0.81014194788176,0.892997282840798,0.673588117878509,2.59006405111641,1.53316637465883,0,2.38162267109529,0,3.87780264148325,0.872188104285069,2.98183171017191,2.40597972162702,4.8991396900891,3.15520282823695,4.25602058638028,1.68203280042692,1.06748995729705,0.49333509683432,4.04574346019696,1.88594940897563,1.47115712802113,3.78393569112329,1.15235184896,5.62371436401112,1.87296046098192,2.85235910772225,3.28787097213962,4.11020745253177,1.94247533241758,2.10676210053373,4.08308342509786,2.08818339430006,4.44300859055791,4.75201142912821,4.94533858557114,3.64064544775211,4.31170885089743,4.88174730466792,3.1279629967991,7.75779523355712,4.82875382968922,2.14541457059314,3.15499923703853,1.13432183160021,3.7671823494661,1.92201649936711,1.90738711043606,4.50136644126603,4.74041634496819,4.12224864073007,2.23340227597908,2.86919764810153,1.94874010322397,3.78650661366172,1.93304787148829,8.72888706821584,0.710019185033229,0.403008392910561,1.86516651541536,1.93260853163297,2.45471508531751,0.860413786167011,1.82960559194393,2.12047629314376,2.09149097165133,2.17688215532278,1.51392510525377,3.28479623168247,1.56449532329816,3.21620469096443,1.38134921352481,0.928735856063958,1.44375896333917,1.30137480043828,2.19160097101532,1.20505514941741,1.43382164552112,1.52515610864684,2.37270619111097,0.674156540800822,1.37355025587742,3.8474715694639,0,0,3.7041661019826,1.47008711385542,3.80265104465493,0,1.18157981336281,0.441463099414651,2.09080345523293,2.23038153388083,1.31700342490351,3.37205259772859,2.01057944823262,2.68506490959736,2.6064664424826,4.15973914111831,0,2.55046890945169,1.6437217193015,0.577465791044295,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3.25516942652591,0.665756774185513,1.61019034872821,0|short_description=p1@NBPF3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25076 | |||
|TSSclassifier=S | |||
|UniProt=Q9H094,E7EM87,Q3BBW0,B3KTI0 | |||
|association_with_transcript=0bp_to_ENST00000318220,ENST00000318249,ENST00000417552,ENST00000454000,ENST00000475869,ENST00000478653,NM_032264,uc001ber.2,uc001bes.2,uc009vqb.2,uc010odm.1_5end | |||
|description=CAGE_peak_1_at_NBPF3_5end | |||
|id=chr1:21766588..21766637,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.20e-09!180;CL:0000057!8.29e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.89e-08!365;UBERON:0003102!3.38e-07!95;UBERON:0000924!9.57e-07!173;UBERON:0006601!9.57e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.908391896352783,2.14100523890983,1.69145284915165,2.00146596706261,2.68176656656373,0.872338524100369,2.53299878168311,0.631719873426831,3.65659879479774,1.96587149201207,0.697801167972428,2.18441372130172,0.527533956456907,1.60896258848061,2.31978163009541,1.34465029290355,3.01347264011988,0.730310090387373,1.95173119516203,3.0780264519197,2.65200898617529,1.88072832886853,1.43117993565528,2.18999080116615,2.25976751270645,1.52826811495903,1.31360943119913,1.02324015707783,1.18009283054671,1.91914699048606,2.01260960310899,0.919421224478927,1.50602959389125,3.32778609150109,2.40148321798935,4.54941543959749,1.17440175733939,0,1.00272223735071,0.868043482863407,1.34349284543955,1.94336199611388,0.257575567634187,1.01778767145695,0.755751887377619,0.727752183563449,0.232429036905685,0.822335776043652,0,0,0.768482119587302,0,0,0,1.35426486594342,0.752969358170419,0,0.449446968890169,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0,0.91332076882317,0,1.09227722252426,1.77901850772711,2.13365111283254,1.20118796110804,2.29900975981793,0,1.90810750907073,0,1.76171156811282,1.52909291250092,0,0.560508562981536,2.10707267820062,1.37696839079683,0.393010762749165,0.616804496998528,1.00311897234407,1.95553359980154,1.4203434172042,3.89653456815823,1.00269411196656,1.17842362989935,0.221533894583621,0.270803863765016,0.896639238079726,1.04047478047903,0,0.276350017785848,0.289803085735052,3.26230438956533,2.40786745280742,2.09071047609954,0.339928028092699,0.383220493601921,1.03088233644789,1.51811815211702,2.22995790026868,1.95325036156926,0.950452044448374,3.61380285786655,2.55973222308837,1.24930726552346,1.89421801635213,4.92676798152628,1.61285394579786,2.13952156626806,1.88271725047639,4.87613732627923,2.01210257911091,1.79007586580942,1.44575660953827,1.00267582127178,1.01392563272577,0.795285947051099,0.486634870302636,1.98523116044542,1.33037638477538,1.22968699970376,4.06035134042909,2.18577172975525,4.07862887062872,0.324547393654683,1.21890816109487,0.26591592103773,0.238490624305342,0,0,0.596287222100115,0.860234595106124,1.38856200643038,0,0.838998872419812,1.10047216776027,0.417989933073621,1.03366703667732,0.35576626268671,0,0.805658634218294,0.760272105718513,1.70843440283719,2.57364156242108,0.81014194788176,0.892997282840798,0.673588117878509,2.59006405111641,1.53316637465883,0,2.38162267109529,0,3.87780264148325,0.872188104285069,2.98183171017191,2.40597972162702,4.8991396900891,3.15520282823695,4.25602058638028,1.68203280042692,1.06748995729705,0.49333509683432,4.04574346019696,1.88594940897563,1.47115712802113,3.78393569112329,1.15235184896,5.62371436401112,1.87296046098192,2.85235910772225,3.28787097213962,4.11020745253177,1.94247533241758,2.10676210053373,4.08308342509786,2.08818339430006,4.44300859055791,4.75201142912821,4.94533858557114,3.64064544775211,4.31170885089743,4.88174730466792,3.1279629967991,7.75779523355712,4.82875382968922,2.14541457059314,3.15499923703853,1.13432183160021,3.7671823494661,1.92201649936711,1.90738711043606,4.50136644126603,4.74041634496819,4.12224864073007,2.23340227597908,2.86919764810153,1.94874010322397,3.78650661366172,1.93304787148829,8.72888706821584,0.710019185033229,0.403008392910561,1.86516651541536,1.93260853163297,2.45471508531751,0.860413786167011,1.82960559194393,2.12047629314376,2.09149097165133,2.17688215532278,1.51392510525377,3.28479623168247,1.56449532329816,3.21620469096443,1.38134921352481,0.928735856063958,1.44375896333917,1.30137480043828,2.19160097101532,1.20505514941741,1.43382164552112,1.52515610864684,2.37270619111097,0.674156540800822,1.37355025587742,3.8474715694639,0,0,3.7041661019826,1.47008711385542,3.80265104465493,0,1.18157981336281,0.441463099414651,2.09080345523293,2.23038153388083,1.31700342490351,3.37205259772859,2.01057944823262,2.68506490959736,2.6064664424826,4.15973914111831,0,2.55046890945169,1.6437217193015,0.577465791044295,2.31492756288305,1.33177906564219,3.95102198979638,0,0.984868024349589,0.702012795417713,0.594524649154913,0.93733833986777,2.01578553838631,0.567100388969546,1.43293636324557,1.74380363108377,1.15014803749563,3.94130590316755,1.40877494421162,3.31724984865235,2.01767934783746,3.7872730027914,2.53991577168676,2.29193055334967,0,3.4214489204541,1.95372236136315,4.80548892550268,4.0015700568281,2.80327710863402,3.05172048183296,2.27348686044945,2.58543431515556,0,2.535908257668,1.86156681609409,3.12022310734098,1.28603687131071,1.41849132023278,0.532844358032199,3.28849385413739,5.96883765930587,7.40916303102692,1.62868092146868,4.97548728239564,9.50342247520115,1.20575750823834,0,2.0994328148232,6.08118903205952,1.50677127429638,4.21667878966063,1.91699884393266,8.04033550838797,1.42636905040718,3.04040744001916,2.05476322550383,1.79060963239896,6.27676806363753,1.57624608161542,2.37190332345469,1.15508732651774,1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| |||
|short_description=p1@NBPF3 | |||
}} |
Revision as of 03:40, 12 September 2013
Short description: | p1@NBPF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NBPF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000318220, ENST00000318249, ENST00000417552, ENST00000454000, ENST00000475869, ENST00000478653, NM_032264, uc001ber.2, uc001bes.2, uc009vqb.2, uc010odm.1_5end |
EntrezGene: | NBPF3 |
HGNC: | 25076 |
UniProt: | Q9H094E7EM87Q3BBW0B3KTI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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