FFCP PHASE1:Hg19::chr1:226033045..226033050,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_CU678904_5end|description=CAGE_peak_1_at_CU678904_5end|id=chr1:226033045..226033050,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000153;1.58e-12;9!CL:0000447;1.58e-12;9!CL:0000327;2.31e-11;15!CL:0000138;7.91e-11;6!CL:0002521;1.11e-10;3!CL:0000319;3.56e-08;1|ontology_enrichment_celltype_v019_2=CL:0000153,1.95e-12,9;CL:0000447,1.95e-12,9;CL:0000327,2.47e-11,15;CL:0000058,9.72e-11,6;CL:0000138,9.72e-11,6;CL:0002521,1.01e-10,3;CL:0000319,2.50e-08,1|ontology_enrichment_development_v019=UBERON:0000358;1.41e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;3.56e-08;1|ontology_enrichment_disease_v019_2=DOID:3030,2.50e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002190;1.11e-10;3!UBERON:0002423;9.49e-07;25!UBERON:0002072;9.86e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.01e-10,3;UBERON:0008835,1.02e-07,22;UBERON:0003894,1.02e-07,22;UBERON:0009854,2.25e-07,23;UBERON:0007499,9.15e-07,25;UBERON:0009497,9.15e-07,25;UBERON:0000015,9.15e-07,25;UBERON:0002423,9.15e-07,25;UBERON:0006235,9.15e-07,25;UBERON:0004161,9.15e-07,25;UBERON:0002072,9.33e-07,5|phase1_expression=0.54503513781167,0.856402095563933,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0,4.17897005119742,0,0,0,0.263766978228454,0.74259811776028,0.331397375727916,0,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,1.34349284543955,0.971680998056939,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,0.501559486172034,0.32592226663359,0.946895611469467,0,0.111410456885174,0.589211814949674,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0.164437904603676,0,0.289803085735052,0.593146252648242,0,1.04535523804977,0,0,0,0.759059076058509,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,1.33720097891754,0,0,0,0.255725123687061,1.44575660953827,1.00267582127178,1.44846518960824,0,0,0,0,0,0.72038491523742,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0.55146986366197,0,0,0.404493924480493,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,3.9313088667105,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0.616339038092582,0,0,0.25248486685276,0.317489471460845,0,1.17217447210047,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,7.15312891703765,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0.306923946576125,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0.532685175939381,0,0,0.232420756919918,0,0.200506470303285,0,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.290033387828457,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0.844430541190656,2.30506425071931,0.379473173765715,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,1.58625035258854,0.106824071127473,0,0.245040215981032,0.55740952537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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU678904_5end | |||
|description=CAGE_peak_1_at_CU678904_5end | |||
|id=chr1:226033045..226033050,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.58e-12;9!CL:0000447;1.58e-12;9!CL:0000327;2.31e-11;15!CL:0000138;7.91e-11;6!CL:0002521;1.11e-10;3!CL:0000319;3.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.95e-12,9;CL:0000447,1.95e-12,9;CL:0000327,2.47e-11,15;CL:0000058,9.72e-11,6;CL:0000138,9.72e-11,6;CL:0002521,1.01e-10,3;CL:0000319,2.50e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.41e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.50e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.11e-10;3!UBERON:0002423;9.49e-07;25!UBERON:0002072;9.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.01e-10,3;UBERON:0008835,1.02e-07,22;UBERON:0003894,1.02e-07,22;UBERON:0009854,2.25e-07,23;UBERON:0007499,9.15e-07,25;UBERON:0009497,9.15e-07,25;UBERON:0000015,9.15e-07,25;UBERON:0002423,9.15e-07,25;UBERON:0006235,9.15e-07,25;UBERON:0004161,9.15e-07,25;UBERON:0002072,9.33e-07,5 | |||
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| |||
|short_description=p1@CU678904 | |||
}} |
Revision as of 03:56, 12 September 2013
Short description: | p1@CU678904 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CU678904_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_CU678904_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.95e-12 | 9 |
carbohydrate secreting cell | 1.95e-12 | 9 |
extracellular matrix secreting cell | 2.47e-11 | 15 |
chondroblast | 9.72e-11 | 6 |
chondrocyte | 9.72e-11 | 6 |
subcutaneous fat cell | 1.01e-10 | 3 |
mucus secreting cell | 2.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.01e-10 | 3 |
hepatic diverticulum | 1.02e-07 | 22 |
liver primordium | 1.02e-07 | 22 |
digestive tract diverticulum | 2.25e-07 | 23 |
epithelial sac | 9.15e-07 | 25 |
epithelium of foregut-midgut junction | 9.15e-07 | 25 |
anatomical boundary | 9.15e-07 | 25 |
hepatobiliary system | 9.15e-07 | 25 |
foregut-midgut junction | 9.15e-07 | 25 |
septum transversum | 9.15e-07 | 25 |
hypodermis | 9.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.50e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.