FFCP PHASE1:Hg19::chr1:31196427..31196433,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4146|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6907|TSSclassifier=S|UniProt=P21941|association_with_transcript=0bp_to_ENST00000373765,NM_002379,uc001brz.2_5end|coexpression_cluster_id=C365|description=CAGE_peak_1_at_MATN1_5end|id=chr1:31196427..31196433,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;4.61e-26;1!UBERON:0006965;1.21e-13;2|ontology_enrichment_disease=DOID:178!4.77e-13!1;DOID:326!4.77e-13!1;DOID:3978!4.77e-13!1;DOID:3394!4.77e-13!1;DOID:5844!4.77e-13!1;DOID:114!3.70e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!3.89e-25!2;UBERON:0000341!8.00e-25!2;UBERON:0007029!3.33e-13!1;UBERON:0007190!9.73e-13!1;UBERON:0000200!1.47e-08!6;UBERON:0003126!7.55e-08!7;UBERON:0001005!7.55e-08!7;UBERON:0007023!4.09e-07!115;UBERON:0001870!5.60e-07!2|ontology_enrichment_uberon_v019=UBERON:0003127;1.14e-50;2!UBERON:0000341;5.15e-50;2!UBERON:0007029;9.79e-26;1!UBERON:0000974;1.85e-17;6!UBERON:0003126;2.65e-15;7!UBERON:0001005;2.65e-15;7!UBERON:0007196;1.18e-07;15!UBERON:0001558;1.18e-07;15!UBERON:0000014;1.92e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.14e-50,2;UBERON:0000341,5.15e-50,2;UBERON:0007029,9.79e-26,1;UBERON:0003126,2.65e-15,7;UBERON:0001005,2.65e-15,7;UBERON:0000974,6.94e-11,10;UBERON:0007196,1.18e-07,15;UBERON:0001558,1.18e-07,15;UBERON:0000014,1.92e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17292757703851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11870101936739,6.31424290976881,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,29.7580539329675,0,0,0,0,0,0,0,0,13.1251635868598,88.1549944846935,0,0,0,0,9.38563769613817,0,0,0,0,0|short_description=p1@MATN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6907 | |||
|TSSclassifier=S | |||
|UniProt=P21941 | |||
|association_with_transcript=0bp_to_ENST00000373765,NM_002379,uc001brz.2_5end | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_1_at_MATN1_5end | |||
|id=chr1:31196427..31196433,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.61e-26;1!UBERON:0006965;1.21e-13;2 | |||
|ontology_enrichment_disease=DOID:178!4.77e-13!1;DOID:326!4.77e-13!1;DOID:3978!4.77e-13!1;DOID:3394!4.77e-13!1;DOID:5844!4.77e-13!1;DOID:114!3.70e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.89e-25!2;UBERON:0000341!8.00e-25!2;UBERON:0007029!3.33e-13!1;UBERON:0007190!9.73e-13!1;UBERON:0000200!1.47e-08!6;UBERON:0003126!7.55e-08!7;UBERON:0001005!7.55e-08!7;UBERON:0007023!4.09e-07!115;UBERON:0001870!5.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.14e-50;2!UBERON:0000341;5.15e-50;2!UBERON:0007029;9.79e-26;1!UBERON:0000974;1.85e-17;6!UBERON:0003126;2.65e-15;7!UBERON:0001005;2.65e-15;7!UBERON:0007196;1.18e-07;15!UBERON:0001558;1.18e-07;15!UBERON:0000014;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.14e-50,2;UBERON:0000341,5.15e-50,2;UBERON:0007029,9.79e-26,1;UBERON:0003126,2.65e-15,7;UBERON:0001005,2.65e-15,7;UBERON:0000974,6.94e-11,10;UBERON:0007196,1.18e-07,15;UBERON:0001558,1.18e-07,15;UBERON:0000014,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17292757703851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11870101936739,6.31424290976881,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,29.7580539329675,0,0,0,0,0,0,0,0,13.1251635868598,88.1549944846935,0,0,0,0,9.38563769613817,0,0,0,0,0 | |||
|short_description=p1@MATN1 | |||
}} |
Revision as of 05:11, 12 September 2013
Short description: | p1@MATN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MATN1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | 0bp_to_ENST00000373765, NM_002379, uc001brz.2_5end |
EntrezGene: | MATN1 |
HGNC: | 6907 |
UniProt: | P21941 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.14e-50 | 2 |
throat | 5.15e-50 | 2 |
surface | 9.79e-26 | 1 |
trachea | 2.65e-15 | 7 |
respiratory airway | 2.65e-15 | 7 |
neck | 6.94e-11 | 10 |
tracheobronchial tree | 1.18e-07 | 15 |
lower respiratory tract | 1.18e-07 | 15 |
zone of skin | 1.92e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.