FFCP PHASE1:Hg19::chr1:44497180..44497218,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6536|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11056|TSSclassifier=S|UniProt=|association_with_transcript=-41bp_to_ENST00000492434_5end|description=CAGE_peak_4_at_SLC6A9_5end|id=chr1:44497180..44497218,-|ontology_enrichment_celltype=CL:0000066!7.96e-15!254;CL:0000223!1.48e-08!59;CL:0002076!3.37e-08!43|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,3.37e-12,253;CL:0000223,1.25e-08,58;CL:0002076,2.11e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!3.81e-20!143;DOID:305!1.55e-17!106;DOID:162!4.27e-11!235;DOID:14566!4.86e-10!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,6.57e-20,143;DOID:305,2.38e-16,106;DOID:162,1.96e-12,235;DOID:14566,1.77e-11,239|ontology_enrichment_uberon=UBERON:0004119!1.58e-12!169;UBERON:0000925!1.58e-12!169;UBERON:0006595!1.58e-12!169;UBERON:0000475!3.38e-11!365;UBERON:0000481!1.46e-10!347;UBERON:0001007!5.00e-10!155;UBERON:0001555!5.00e-10!155;UBERON:0007026!5.00e-10!155;UBERON:0000077!3.89e-09!130;UBERON:0000468!4.87e-08!659;UBERON:0004921!8.14e-08!129;UBERON:0004185!8.14e-08!129;UBERON:0001004!1.11e-07!72;UBERON:0000064!1.44e-07!219;UBERON:0000063!1.67e-07!97;UBERON:0000924!5.36e-07!173;UBERON:0006601!5.36e-07!173;UBERON:0001048!6.16e-07!168|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.40e-07,160;UBERON:0000925,2.40e-07,160;UBERON:0006595,2.40e-07,160|phase1_expression=0.908391896352783,0.856402095563933,2.53717927372748,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0.783556884599516,0.491467873003018,3.48900583986214,1.52908960491121,0.791300934685361,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.61560529038394,1.02000345622126,3.13454721478088,0.286235987131057,0.410623275218653,0.753255837568817,0,0,0,0,0,0.154816123316076,4.59710612239464,1.50602959389125,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.15076305659177,1.80719576192283,2.50668955317945,1.01392563272577,0.795285947051099,0.973269740605272,0.472674085820339,0.221729397462564,0.263504357079378,0.589405839739707,5.10013403609559,2.22470665670658,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,1.74437620857014,1.49091585508596,0.759783069987479,0.529636723252875,4.30254931123221,0.709336764396714,1.68203280042692,0,2.71334303258876,0.622422070799533,2.2900814251847,0.163461903113459,2.72443369760877,0.576175924479999,4.68642863667593,0,0,0.597794722207204,1.05691048779388,0.485618833104395,0.561803226808994,0.61246251376468,0.245668634623536,1.44656093646072,0,2.22540236350701,0.910161361938026,2.15585442544872,0.505008341862199,0.875829639103749,0.831192346452549,0.438977620880838,0.919463387397059,1.35214253015937,1.13432183160021,2.51145489964407,2.34913127700424,1.27159140695737,3.30100205692843,1.44273540933814,3.09168648054755,1.11670113798954,4.89451363499672,1.55899208257918,2.27190396819703,1.65689817556139,0.80823028409406,3.55009592516614,0.403008392910561,0.508681776931463,1.54608682530637,1.36373060295417,0.860413786167011,1.34171076742555,1.45782745153634,1.16193942869518,0.414644220061482,0.756962552626885,1.09493207722749,0,1.92972281457866,1.38134921352481,0,0,2.12952240071719,3.03452442140583,2.16909926895134,2.86764329104224,2.83243277320128,1.18635309555548,0.943819157121151,1.37355025587742,1.53898862778556,0,0,0.4115740113314,0,0,0,0.590789906681404,0,1.47586126251736,0.686271241194102,1.75600456653801,7.86812272803337,2.41269533787914,1.38882667737794,2.6064664424826,0,1.44331342025273,0.115930404975077,0.821860859650752,0,0,0,3.95102198979638,0.858486162094873,0,0,0,0,0.335964256397719,0.708875486211932,3.31366534000539,1.74380363108377,1.15014803749563,0,0,0.207328115540772,0.144119953416961,0,0,0.763976851116555,1.17217447210047,0,0.411309970813294,0.600686115687835,0.571652865261156,1.00917975910825,0.43596006883328,0.2933531432838,1.42198887333556,7.15312891703765,0,1.06375246633948,0,0,0,0,0.714889968290738,2.17048642156577,1.64648067356154,0.65147236858747,0.355391948742546,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,2.39624855491583,4.59447743336456,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,3.30323011489202,0,0,0.167516265334349,1.27587750330633,0,0,0,0.49076596687656,0.500170521059677,2.17012018959788,0.623912584592421,2.85486382075459,0.946214490203608,2.22568688486155,1.20378439891088,2.27407504055985,0,2.65690239414175,1.10621501125022,1.21637060255316,3.52442083432933,2.05886054286514,0,0,0,1.81876542867756,6.65741758041988,3.0239029332968,1.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000492434_5end | |||
|description=CAGE_peak_4_at_SLC6A9_5end | |||
|id=chr1:44497180..44497218,- | |||
|ontology_enrichment_celltype=CL:0000066!7.96e-15!254;CL:0000223!1.48e-08!59;CL:0002076!3.37e-08!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.37e-12,253;CL:0000223,1.25e-08,58;CL:0002076,2.11e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.81e-20!143;DOID:305!1.55e-17!106;DOID:162!4.27e-11!235;DOID:14566!4.86e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.57e-20,143;DOID:305,2.38e-16,106;DOID:162,1.96e-12,235;DOID:14566,1.77e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.58e-12!169;UBERON:0000925!1.58e-12!169;UBERON:0006595!1.58e-12!169;UBERON:0000475!3.38e-11!365;UBERON:0000481!1.46e-10!347;UBERON:0001007!5.00e-10!155;UBERON:0001555!5.00e-10!155;UBERON:0007026!5.00e-10!155;UBERON:0000077!3.89e-09!130;UBERON:0000468!4.87e-08!659;UBERON:0004921!8.14e-08!129;UBERON:0004185!8.14e-08!129;UBERON:0001004!1.11e-07!72;UBERON:0000064!1.44e-07!219;UBERON:0000063!1.67e-07!97;UBERON:0000924!5.36e-07!173;UBERON:0006601!5.36e-07!173;UBERON:0001048!6.16e-07!168 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.40e-07,160;UBERON:0000925,2.40e-07,160;UBERON:0006595,2.40e-07,160 | |||
|phase1_expression=0.908391896352783,0.856402095563933,2.53717927372748,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0.783556884599516,0.491467873003018,3.48900583986214,1.52908960491121,0.791300934685361,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.61560529038394,1.02000345622126,3.13454721478088,0.286235987131057,0.410623275218653,0.753255837568817,0,0,0,0,0,0.154816123316076,4.59710612239464,1.50602959389125,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.15076305659177,1.80719576192283,2.50668955317945,1.01392563272577,0.795285947051099,0.973269740605272,0.472674085820339,0.221729397462564,0.263504357079378,0.589405839739707,5.10013403609559,2.22470665670658,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,1.74437620857014,1.49091585508596,0.759783069987479,0.529636723252875,4.30254931123221,0.709336764396714,1.68203280042692,0,2.71334303258876,0.622422070799533,2.2900814251847,0.163461903113459,2.72443369760877,0.576175924479999,4.68642863667593,0,0,0.597794722207204,1.05691048779388,0.485618833104395,0.561803226808994,0.61246251376468,0.245668634623536,1.44656093646072,0,2.22540236350701,0.910161361938026,2.15585442544872,0.505008341862199,0.875829639103749,0.831192346452549,0.438977620880838,0.919463387397059,1.35214253015937,1.13432183160021,2.51145489964407,2.34913127700424,1.27159140695737,3.30100205692843,1.44273540933814,3.09168648054755,1.11670113798954,4.89451363499672,1.55899208257918,2.27190396819703,1.65689817556139,0.80823028409406,3.55009592516614,0.403008392910561,0.508681776931463,1.54608682530637,1.36373060295417,0.860413786167011,1.34171076742555,1.45782745153634,1.16193942869518,0.414644220061482,0.756962552626885,1.09493207722749,0,1.92972281457866,1.38134921352481,0,0,2.12952240071719,3.03452442140583,2.16909926895134,2.86764329104224,2.83243277320128,1.18635309555548,0.943819157121151,1.37355025587742,1.53898862778556,0,0,0.4115740113314,0,0,0,0.590789906681404,0,1.47586126251736,0.686271241194102,1.75600456653801,7.86812272803337,2.41269533787914,1.38882667737794,2.6064664424826,0,1.44331342025273,0.115930404975077,0.821860859650752,0,0,0,3.95102198979638,0.858486162094873,0,0,0,0,0.335964256397719,0.708875486211932,3.31366534000539,1.74380363108377,1.15014803749563,0,0,0.207328115540772,0.144119953416961,0,0,0.763976851116555,1.17217447210047,0,0.411309970813294,0.600686115687835,0.571652865261156,1.00917975910825,0.43596006883328,0.2933531432838,1.42198887333556,7.15312891703765,0,1.06375246633948,0,0,0,0,0.714889968290738,2.17048642156577,1.64648067356154,0.65147236858747,0.355391948742546,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,2.39624855491583,4.59447743336456,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,3.30323011489202,0,0,0.167516265334349,1.27587750330633,0,0,0,0.49076596687656,0.500170521059677,2.17012018959788,0.623912584592421,2.85486382075459,0.946214490203608,2.22568688486155,1.20378439891088,2.27407504055985,0,2.65690239414175,1.10621501125022,1.21637060255316,3.52442083432933,2.05886054286514,0,0,0,1.81876542867756,6.65741758041988,3.0239029332968,1.98486246255021,2.14846762603287,3.08726103876381,2.81906128362542,1.53512174720011,1.76939313257968,1.48418066444991,0.462629081407967,0,0.657017248110473,0,0,1.20859449591622,0.200506470303285,3.68323955743585,1.49258782613989,1.0925470080403,0.262248829918848,2.70719767744447,0.308061348417659,0,1.46139224653261,0,0,0,0.215915916102139,0,1.62567862526312,1.00337954770971,1.52925763827023,3.3243040357149,0.447749509444357,9.64743457242112,12.0260307471454,0,0.328014645699706,1.95227036798582,0.309123034943167,0.0915694648183434,0,1.72279661398852,1.95018073810956,0,2.51343867559517,0,0.460511024178389,0.137836572484531,0.751941714077915,0.145016693914229,0.255679882248303,1.95870478422822,3.63626813794152,4.03599141466723,0.893288987462089,2.73126008309985,0.464845549297286,3.77774816196768,1.3940745403212,1.23213432070436,0,0,0.18532421910392,0.286249773483982,0,0,0.38126038784765,0.255897791311334,1.71175595213568,1.27281299170375,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.975267478179181,0.974853958525138,1.05650146756755,0.409499734223957,0.989838023675989,1.13008116620243,2.75682671773062,0,0,0,0.655894752046633,0.608731130888112,1.239293992399,0.563391205064483,0.573645408816206,2.45622602532803,0.35667105148125,0,0.633322905892992,0.987884678879706,0.75894634753143,2.44954304171488,3.56021817084395,1.34060455107157,3.26672954583968,0.282431402330337,2.58303223602738,1.68471475667626,1.33029046061003,0,0.507447609232169,0,0,0.23823177545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| |||
|short_description=p4@SLC6A9 | |||
}} |
Revision as of 05:52, 12 September 2013
Short description: | p4@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC6A9_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000492434_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.37e-12 | 253 |
endodermal cell | 1.25e-08 | 58 |
endo-epithelial cell | 2.11e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.40e-07 | 160 |
endoderm | 2.40e-07 | 160 |
presumptive endoderm | 2.40e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.57e-20 | 143 |
carcinoma | 2.38e-16 | 106 |
cancer | 1.96e-12 | 235 |
disease of cellular proliferation | 1.77e-11 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.