FFCP PHASE1:Hg19::chr22:42084815..42084862,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7819 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469522_5end | |||
|description=CAGE_peak_1_at_NHP2L1_5end | |||
|id=chr22:42084815..42084862,- | |||
|ontology_enrichment_celltype=CL:0000012!7.27e-18!682;CL:0000548!7.97e-18!679;CL:0000004!7.97e-18!679;CL:0000255!7.97e-18!679;CL:0000144!3.25e-17!625;CL:0002371!3.53e-17!591;CL:0000003!6.77e-17!722;CL:0000723!3.71e-12!436;CL:0000048!8.78e-12!430;CL:0000034!2.50e-11!444;CL:0000055!1.40e-10!180;CL:0000183!4.36e-10!59;CL:0000192!5.53e-10!42;CL:0000514!5.53e-10!42;CL:0000359!1.50e-09!32;CL:0000187!2.57e-09!54;CL:0000680!3.56e-09!57;CL:0000056!3.56e-09!57;CL:0000355!3.56e-09!57;CL:0000393!5.42e-09!60;CL:0000211!5.42e-09!60;CL:0000222!6.11e-09!119;CL:0000063!8.82e-08!578;CL:0000542!1.42e-07!53;CL:0000051!1.42e-07!53;CL:0000838!2.68e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.36e-09;32!CL:0000192;2.18e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.95e-12,433;CL:0000048,1.16e-11,427;CL:0000034,3.31e-11,441;CL:0000192,6.23e-10,43;CL:0000514,6.23e-10,43;CL:0000359,1.50e-09,32;CL:0000187,2.67e-09,55;CL:0000222,3.03e-09,121;CL:0000680,3.65e-09,58;CL:0000056,3.65e-09,58;CL:0000355,3.65e-09,58;CL:0000393,5.50e-09,61;CL:0000211,5.50e-09,61;CL:0000542,1.42e-07,53;CL:0000051,1.42e-07,53;CL:0000838,2.68e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-07;43 | |||
|ontology_enrichment_disease=DOID:2531!6.26e-08!51;DOID:0060083!6.26e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.26e-08,51;DOID:0060083,6.26e-08,51 | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@NHP2L1 | |||
}} |
Revision as of 12:10, 12 September 2013
Short description: | p1@NHP2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NHP2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469522_5end |
EntrezGene: | NHP2L1 |
HGNC: | 7819 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.95e-12 | 433 |
multi fate stem cell | 1.16e-11 | 427 |
stem cell | 3.31e-11 | 441 |
smooth muscle cell | 6.23e-10 | 43 |
smooth muscle myoblast | 6.23e-10 | 43 |
vascular associated smooth muscle cell | 1.50e-09 | 32 |
muscle cell | 2.67e-09 | 55 |
mesodermal cell | 3.03e-09 | 121 |
muscle precursor cell | 3.65e-09 | 58 |
myoblast | 3.65e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.65e-09 | 58 |
electrically responsive cell | 5.50e-09 | 61 |
electrically active cell | 5.50e-09 | 61 |
lymphocyte | 1.42e-07 | 53 |
common lymphoid progenitor | 1.42e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.68e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.94e-14 | 78 |
somite | 2.87e-12 | 71 |
presomitic mesoderm | 2.87e-12 | 71 |
presumptive segmental plate | 2.87e-12 | 71 |
dermomyotome | 2.87e-12 | 71 |
trunk paraxial mesoderm | 2.87e-12 | 71 |
paraxial mesoderm | 3.41e-12 | 72 |
presumptive paraxial mesoderm | 3.41e-12 | 72 |
dense mesenchyme tissue | 4.01e-12 | 73 |
multilaminar epithelium | 4.94e-10 | 83 |
artery | 1.10e-09 | 42 |
arterial blood vessel | 1.10e-09 | 42 |
arterial system | 1.10e-09 | 42 |
epithelial tube open at both ends | 3.80e-09 | 59 |
blood vessel | 3.80e-09 | 59 |
blood vasculature | 3.80e-09 | 59 |
vascular cord | 3.80e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 5.99e-09 | 83 |
skeletal muscle tissue | 8.25e-09 | 62 |
striated muscle tissue | 8.25e-09 | 62 |
myotome | 8.25e-09 | 62 |
unilaminar epithelium | 1.05e-08 | 148 |
vessel | 1.12e-08 | 68 |
muscle tissue | 1.11e-07 | 64 |
musculature | 1.11e-07 | 64 |
musculature of body | 1.11e-07 | 64 |
vasculature | 2.06e-07 | 78 |
vascular system | 2.06e-07 | 78 |
epithelial tube | 2.29e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.26e-08 | 51 |
immune system cancer | 6.26e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.