FFCP PHASE1:Hg19::chr2:30144102..30144111,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=238|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=427|TSSclassifier=W|UniProt=Q9UM73|association_with_transcript=320bp_to_ENST00000389048,uc002rmy.2_5end|coexpression_cluster_id=C102|description=CAGE_peak_9_at_ALK_5end|id=chr2:30144102..30144111,-|ontology_enrichment_celltype=CL:0002583!6.42e-07!2|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!1.33e-10!10;DOID:169!2.09e-08!6|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22|ontology_enrichment_uberon=UBERON:0009663!1.28e-25!7;UBERON:0000369!1.54e-25!4;UBERON:0002435!1.54e-25!4;UBERON:0000204!1.54e-25!4;UBERON:0010082!1.54e-25!4;UBERON:0002308!5.25e-20!9;UBERON:0002420!5.25e-20!9;UBERON:0000125!5.25e-20!9;UBERON:0007245!5.25e-20!9;UBERON:0010009!5.25e-20!9;UBERON:0010011!5.25e-20!9;UBERON:0000454!5.25e-20!9;UBERON:0002791!8.22e-20!33;UBERON:0002020!3.19e-19!34;UBERON:0003528!3.19e-19!34;UBERON:0001893!3.19e-19!34;UBERON:0001049!1.36e-17!57;UBERON:0005068!1.36e-17!57;UBERON:0006241!1.36e-17!57;UBERON:0007135!1.36e-17!57;UBERON:0002616!5.78e-17!59;UBERON:0002780!7.00e-16!41;UBERON:0001890!7.00e-16!41;UBERON:0006240!7.00e-16!41;UBERON:0005383!9.09e-16!3;UBERON:0005382!9.09e-16!3;UBERON:0001869!1.12e-15!32;UBERON:0003080!1.71e-15!42;UBERON:0000073!1.17e-14!94;UBERON:0001016!1.17e-14!94;UBERON:0000955!3.88e-14!69;UBERON:0006238!3.88e-14!69;UBERON:0002346!4.44e-13!90;UBERON:0002298!5.71e-13!8;UBERON:0001874!1.25e-12!1;UBERON:0002038!1.57e-12!1;UBERON:0009661!1.57e-12!1;UBERON:0001882!1.75e-12!1;UBERON:0005403!1.75e-12!1;UBERON:0002902!3.45e-12!1;UBERON:0009899!3.45e-12!1;UBERON:0001017!9.56e-12!82;UBERON:0003075!2.70e-11!86;UBERON:0007284!2.70e-11!86;UBERON:0005743!3.75e-11!86;UBERON:0003056!1.77e-10!61;UBERON:0002072!5.44e-10!5;UBERON:0000013!6.51e-10!5;UBERON:0002410!6.51e-10!5;UBERON:0001872!8.13e-10!5;UBERON:0000924!1.02e-08!173;UBERON:0006601!1.02e-08!173;UBERON:0001950!1.45e-08!20;UBERON:0007023!3.23e-08!115;UBERON:0002619!7.78e-08!22;UBERON:0004121!1.63e-07!169;UBERON:0000033!1.89e-07!123;UBERON:0000153!4.78e-07!129;UBERON:0007811!4.78e-07!129;UBERON:0000956!5.97e-07!25;UBERON:0000203!5.97e-07!25;UBERON:0002950!6.80e-07!2;UBERON:0001891!6.80e-07!2;UBERON:0009616!6.80e-07!2;UBERON:0001873!9.02e-07!2;UBERON:0010122!9.02e-07!2|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43991198637104,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@ALK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |||
|TSSclassifier=W | |||
|UniProt=Q9UM73 | |||
|association_with_transcript=320bp_to_ENST00000389048,uc002rmy.2_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_9_at_ALK_5end | |||
|id=chr2:30144102..30144111,- | |||
|ontology_enrichment_celltype=CL:0002583!6.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.33e-10!10;DOID:169!2.09e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p9@ALK | |||
}} |
Revision as of 18:16, 12 September 2013
Short description: | p9@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 320bp_to_ENST00000389048, uc002rmy.2_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | Q9UM73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.