FFCP PHASE1:Mm9::chr11:21270455..21270488,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216558|HGNC=|MCL_coexpression_id=8|UniProt=Q91ZJ5|association_with_transcript=0bp_to_ENSMUST00000102875_5end|description=CAGE_peak_1_at_Ugp2_5end|id=chr11:21270455..21270488,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!8.81e-15!47;UBERON:0009854!8.65e-10!23;UBERON:0009856!8.65e-10!23;UBERON:0002365!2.27e-09!25;UBERON:0002330!2.27e-09!25;UBERON:0002107!3.19e-09!22;UBERON:0007499!3.19e-09!22;UBERON:0006925!3.19e-09!22;UBERON:0009497!3.19e-09!22;UBERON:0000015!3.19e-09!22;UBERON:0002423!3.19e-09!22;UBERON:0006235!3.19e-09!22;UBERON:0008835!3.19e-09!22;UBERON:0003894!3.19e-09!22;UBERON:0004161!3.19e-09!22;UBERON:0008836!3.19e-09!22;UBERON:0007100!8.48e-08!18;UBERON:0000948!8.48e-08!18;UBERON:0005498!8.48e-08!18;UBERON:0004140!8.48e-08!18;UBERON:0009881!8.48e-08!18;UBERON:0004141!8.48e-08!18;UBERON:0003084!8.48e-08!18;UBERON:0007005!8.48e-08!18;UBERON:0004139!8.48e-08!18;UBERON:0004291!8.48e-08!18;UBERON:0004535!6.82e-07!23;UBERON:0001009!6.82e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.79e-15,47;UBERON:0009854,8.64e-10,23;UBERON:0009856,8.64e-10,23;UBERON:0002365,2.27e-09,25;UBERON:0002330,2.27e-09,25;UBERON:0002107,3.18e-09,22;UBERON:0007499,3.18e-09,22;UBERON:0006925,3.18e-09,22;UBERON:0009497,3.18e-09,22;UBERON:0000015,3.18e-09,22;UBERON:0002423,3.18e-09,22;UBERON:0006235,3.18e-09,22;UBERON:0008835,3.18e-09,22;UBERON:0003894,3.18e-09,22;UBERON:0004161,3.18e-09,22;UBERON:0008836,3.18e-09,22;UBERON:0003104,6.08e-08,61;UBERON:0009142,6.08e-08,61;UBERON:0007100,8.47e-08,18;UBERON:0000948,8.47e-08,18;UBERON:0005498,8.47e-08,18;UBERON:0004140,8.47e-08,18;UBERON:0009881,8.47e-08,18;UBERON:0004141,8.47e-08,18;UBERON:0003084,8.47e-08,18;UBERON:0007005,8.47e-08,18;UBERON:0004139,8.47e-08,18;UBERON:0004291,8.47e-08,18;UBERON:0005256,4.24e-07,45;UBERON:0004535,6.81e-07,23;UBERON:0001009,6.81e-07,23|phase1_expression=19.2178616525753,70.4930323431509,70.9798813447676,42.3449895829562,43.0770327753859,22.4958224361932,33.6402202457557,1.03298658753261,5.06839399746,3.04283884218592,0.856089841127525,0.478632953972018,1.19840510951844,0.699363219351979,0.999329285446988,1.21485160433896,0.699561878128147,0.946386496074713,1.7824876368746,2.12194825899015,30.7856710346873,5.85816612085223,3.39559725880616,54.2374313269649,55.7464552993223,72.3532274784925,80.1217312855879,58.3927040578759,68.7884778432073,50.4060259519862,55.2108971531709,0.635030673459631,0.61506478758457,0,4.91047753577167,4.15586613396231,4.69589519403449,23.8563029520037,27.346737058333,26.6997109426637,45.2938245783881,35.5183652178392,48.5510353031154,12.7155786155333,13.584508783415,40.930925732055,7.04152209913235,14.8257106338704,12.7417985985994,23.1371579898397,16.0984384869167,10.062679505548,4.19456515144341,2.17608642603403,3.36093799142464,74.6052364504246,75.9313615837705,62.911995257848,2.02316460859598,1.05798195854407,0,4.74382344896785,7.11435836888911,4.04954872776629,6.92206453796882,2.1314403448383,11.9840044207362,21.1320067926855,1.34796496001021,1.08004750665353,0.420649922702764,5.14171771926846,6.62605622854841,1.10241719293459,0.958454710182364,0.919218786610021,9.91042928994498,14.0456071893706,18.279177457493,0.527545150920775,1.37231465403614,0.52091337055676,18.1468949350898,18.5711661310454,15.4326230254578,4.71405736757868,9.5389026135399,3.16879057903011,6.58817881998701,12.69602209794,27.8269909153611,289.102422665746,620.133856341468,441.477210759734,398.962720312869,628.581722597562,293.528838075361,60.8436251603666,52.9963449389852,47.3475029843856,13.0984380392313,130.893006962604,43.3168907501298,135.102673599133,30.0922547005588,28.1229450677359,28.3093689208279,287.85756077175,3.10725460376606,10.3909497345377,19.0833859442749,30.4465478312141,39.435250030786,37.529937497603,27.3981687626192,31.6679810150782,40.2927797407029,118.282273960488,88.4610551949874,105.795519865606,101.807940010241,92.6111733488274,193.847431666847,9.07620470735796,10.6817820474862,18.9038220854358,2.03685711660064,4.19931911695385,4.3203877204842,17.3757141709594,19.2150253183823,2.63874139437015,26.0736480288415,17.9000820131231,15.1685272528479,14.9261962022337,27.1911101480345,60.7106016577254,17.9433158487909,44.403231592046,4.42409506073193,5.0578462975364,9.72335500948886,18.3859877759572,13.7433728285682,14.476850392188,15.7418897260344,25.8703370739016,4.74249584452253,9.8335161687266,17.7710635405588,30.0298153425778,17.5169767012127,37.9594861509162,35.8060917349822,14.7285357445685,6.31991868581911,7.46308930632674,6.25159698670304,82.4360574691298,75.0483391939508,95.4328925743379,74.8113364449264,79.6895138576985,92.2517335066522,93.0135779001631,81.2868406240846,81.26867828755,88.039519703712,94.0679569173216,84.0683554990524,141.375387840296,164.882136583579,174.870963644764,37.4316108444146,2.36680608472354,43.2848605708775,69.8149495991757,11.0909890278322,13.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| ||
|EntrezGene=216558 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q91ZJ5 | |||
|association_with_transcript=0bp_to_ENSMUST00000102875_5end | |||
|description=CAGE_peak_1_at_Ugp2_5end | |||
|id=chr11:21270455..21270488,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.81e-15!47;UBERON:0009854!8.65e-10!23;UBERON:0009856!8.65e-10!23;UBERON:0002365!2.27e-09!25;UBERON:0002330!2.27e-09!25;UBERON:0002107!3.19e-09!22;UBERON:0007499!3.19e-09!22;UBERON:0006925!3.19e-09!22;UBERON:0009497!3.19e-09!22;UBERON:0000015!3.19e-09!22;UBERON:0002423!3.19e-09!22;UBERON:0006235!3.19e-09!22;UBERON:0008835!3.19e-09!22;UBERON:0003894!3.19e-09!22;UBERON:0004161!3.19e-09!22;UBERON:0008836!3.19e-09!22;UBERON:0007100!8.48e-08!18;UBERON:0000948!8.48e-08!18;UBERON:0005498!8.48e-08!18;UBERON:0004140!8.48e-08!18;UBERON:0009881!8.48e-08!18;UBERON:0004141!8.48e-08!18;UBERON:0003084!8.48e-08!18;UBERON:0007005!8.48e-08!18;UBERON:0004139!8.48e-08!18;UBERON:0004291!8.48e-08!18;UBERON:0004535!6.82e-07!23;UBERON:0001009!6.82e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.79e-15,47;UBERON:0009854,8.64e-10,23;UBERON:0009856,8.64e-10,23;UBERON:0002365,2.27e-09,25;UBERON:0002330,2.27e-09,25;UBERON:0002107,3.18e-09,22;UBERON:0007499,3.18e-09,22;UBERON:0006925,3.18e-09,22;UBERON:0009497,3.18e-09,22;UBERON:0000015,3.18e-09,22;UBERON:0002423,3.18e-09,22;UBERON:0006235,3.18e-09,22;UBERON:0008835,3.18e-09,22;UBERON:0003894,3.18e-09,22;UBERON:0004161,3.18e-09,22;UBERON:0008836,3.18e-09,22;UBERON:0003104,6.08e-08,61;UBERON:0009142,6.08e-08,61;UBERON:0007100,8.47e-08,18;UBERON:0000948,8.47e-08,18;UBERON:0005498,8.47e-08,18;UBERON:0004140,8.47e-08,18;UBERON:0009881,8.47e-08,18;UBERON:0004141,8.47e-08,18;UBERON:0003084,8.47e-08,18;UBERON:0007005,8.47e-08,18;UBERON:0004139,8.47e-08,18;UBERON:0004291,8.47e-08,18;UBERON:0005256,4.24e-07,45;UBERON:0004535,6.81e-07,23;UBERON:0001009,6.81e-07,23 | |||
|phase1_expression=19.2178616525753,70.4930323431509,70.9798813447676,42.3449895829562,43.0770327753859,22.4958224361932,33.6402202457557,1.03298658753261,5.06839399746,3.04283884218592,0.856089841127525,0.478632953972018,1.19840510951844,0.699363219351979,0.999329285446988,1.21485160433896,0.699561878128147,0.946386496074713,1.7824876368746,2.12194825899015,30.7856710346873,5.85816612085223,3.39559725880616,54.2374313269649,55.7464552993223,72.3532274784925,80.1217312855879,58.3927040578759,68.7884778432073,50.4060259519862,55.2108971531709,0.635030673459631,0.61506478758457,0,4.91047753577167,4.15586613396231,4.69589519403449,23.8563029520037,27.346737058333,26.6997109426637,45.2938245783881,35.5183652178392,48.5510353031154,12.7155786155333,13.584508783415,40.930925732055,7.04152209913235,14.8257106338704,12.7417985985994,23.1371579898397,16.0984384869167,10.062679505548,4.19456515144341,2.17608642603403,3.36093799142464,74.6052364504246,75.9313615837705,62.911995257848,2.02316460859598,1.05798195854407,0,4.74382344896785,7.11435836888911,4.04954872776629,6.92206453796882,2.1314403448383,11.9840044207362,21.1320067926855,1.34796496001021,1.08004750665353,0.420649922702764,5.14171771926846,6.62605622854841,1.10241719293459,0.958454710182364,0.919218786610021,9.91042928994498,14.0456071893706,18.279177457493,0.527545150920775,1.37231465403614,0.52091337055676,18.1468949350898,18.5711661310454,15.4326230254578,4.71405736757868,9.5389026135399,3.16879057903011,6.58817881998701,12.69602209794,27.8269909153611,289.102422665746,620.133856341468,441.477210759734,398.962720312869,628.581722597562,293.528838075361,60.8436251603666,52.9963449389852,47.3475029843856,13.0984380392313,130.893006962604,43.3168907501298,135.102673599133,30.0922547005588,28.1229450677359,28.3093689208279,287.85756077175,3.10725460376606,10.3909497345377,19.0833859442749,30.4465478312141,39.435250030786,37.529937497603,27.3981687626192,31.6679810150782,40.2927797407029,118.282273960488,88.4610551949874,105.795519865606,101.807940010241,92.6111733488274,193.847431666847,9.07620470735796,10.6817820474862,18.9038220854358,2.03685711660064,4.19931911695385,4.3203877204842,17.3757141709594,19.2150253183823,2.63874139437015,26.0736480288415,17.9000820131231,15.1685272528479,14.9261962022337,27.1911101480345,60.7106016577254,17.9433158487909,44.403231592046,4.42409506073193,5.0578462975364,9.72335500948886,18.3859877759572,13.7433728285682,14.476850392188,15.7418897260344,25.8703370739016,4.74249584452253,9.8335161687266,17.7710635405588,30.0298153425778,17.5169767012127,37.9594861509162,35.8060917349822,14.7285357445685,6.31991868581911,7.46308930632674,6.25159698670304,82.4360574691298,75.0483391939508,95.4328925743379,74.8113364449264,79.6895138576985,92.2517335066522,93.0135779001631,81.2868406240846,81.26867828755,88.039519703712,94.0679569173216,84.0683554990524,141.375387840296,164.882136583579,174.870963644764,37.4316108444146,2.36680608472354,43.2848605708775,69.8149495991757,11.0909890278322,13.7019636397659,19.5878541209582,46.9922612372388,61.3763401011842,95.6834899346173,32.2679761850268,89.1021345056899,110.336156663318,109.426059622633,113.664062790447,35.0539569375146,63.5445866631601,45.2050690287414,8.53505554288868,16.7945313536301,14.6520056375005,26.8819752755815,30.4505404853172,29.5271801738241,42.6214260217494,67.4578376266782,75.3593893638599,92.6712701052722,670.575842471131,11.0117769772622,11.596980711679,20.9121764517914,37.3262623354845,89.2355491083942,191.478640539628,265.543534867098,156.946899518234,276.757904493586,403.988660341866,470.758298800657,410.017502472533,535.719800125824,426.427651941585,454.461797124292,21.4313700593261,22.7389694124582,18.903937267275,26.3104882951542,21.8261930908307,28.4760637651087,40.9435062323944,23.6111713907937,21.9112850307605,13.2878813789265,17.0616602463511,27.8567635016755,31.428666699593,22.4206040801343,12.0633027151418,15.2293591469239,80.1575765021029,40.2867649604909,18.3027672586083,18.4022347949759,12.2951209032507,372.647088553655,46.3797082541897,50.757036758563,28.0050417052639,20.3123478259669,19.3834846451683,13.0215204162863,28.3367491172426,23.0882127749936,22.5314033429518,17.9939937196212,34.349500620401,26.8879061537555,30.6227483584723,51.9655887363487,13.2745138339963,10.9251286269742,10.5813244937663,15.6542216197395,7.08724542913855,17.2163682848599,29.4608254211772,18.1766864738753,31.7282666762402,13.9056173491759,8.4334886859999,9.28219889233682,16.000661470428,11.7039711120352,5.43306471887569,20.3620183280013,14.896579625951,12.3074484145429,10.86023535974,7.61162372786498,114.754465243154,83.673667991209,131.655453638812,39.5727007059552,42.3036797943273,33.4736733351265,15.5184047204077,13.6236946788401,62.0854182021582,27.2575193955449,4.10090113914846,14.2406938894624,11.4820606969221,4.52084296811258,2.7338845544205,2.28778173206523,1.69978429993855,2.6590775941495,2.3493995546752,79.2376612952544,7.59206384594725,20.5352661798117,36.2897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| |||
|short_description=p1@Ugp2 | |||
}} | |||
Revision as of 19:14, 12 September 2013
| Short description: | p1@Ugp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ugp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:8 |
| Association with transcript: | 0bp_to_ENSMUST00000102875_5end |
| EntrezGene: | Ugp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 8.79e-15 | 47 |
| digestive tract diverticulum | 8.64e-10 | 23 |
| sac | 8.64e-10 | 23 |
| exocrine gland | 2.27e-09 | 25 |
| exocrine system | 2.27e-09 | 25 |
| liver | 3.18e-09 | 22 |
| epithelial sac | 3.18e-09 | 22 |
| digestive gland | 3.18e-09 | 22 |
| epithelium of foregut-midgut junction | 3.18e-09 | 22 |
| anatomical boundary | 3.18e-09 | 22 |
| hepatobiliary system | 3.18e-09 | 22 |
| foregut-midgut junction | 3.18e-09 | 22 |
| hepatic diverticulum | 3.18e-09 | 22 |
| liver primordium | 3.18e-09 | 22 |
| septum transversum | 3.18e-09 | 22 |
| liver bud | 3.18e-09 | 22 |
| mesenchyme | 6.08e-08 | 61 |
| entire embryonic mesenchyme | 6.08e-08 | 61 |
| primary circulatory organ | 8.47e-08 | 18 |
| heart | 8.47e-08 | 18 |
| primitive heart tube | 8.47e-08 | 18 |
| primary heart field | 8.47e-08 | 18 |
| anterior lateral plate mesoderm | 8.47e-08 | 18 |
| heart tube | 8.47e-08 | 18 |
| heart primordium | 8.47e-08 | 18 |
| cardiac mesoderm | 8.47e-08 | 18 |
| cardiogenic plate | 8.47e-08 | 18 |
| heart rudiment | 8.47e-08 | 18 |
| trunk mesenchyme | 4.24e-07 | 45 |
| cardiovascular system | 6.81e-07 | 23 |
| circulatory system | 6.81e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
