FFCP PHASE1:Hg19::chr2:85133792..85133798,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=129293|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27013|TSSclassifier=S|UniProt=|association_with_transcript=333bp_to_ENST00000474298,ENST00000489999_5end|description=CAGE_peak_5_at_C2orf89_5end|id=chr2:85133792..85133798,-|ontology_enrichment_celltype=CL:0002371!4.84e-17!591;CL:0000003!9.03e-17!722;CL:0000548!3.92e-16!679;CL:0000004!3.92e-16!679;CL:0000255!3.92e-16!679;CL:0000012!5.41e-16!682;CL:0000144!7.08e-16!625;CL:0000393!4.52e-15!60;CL:0000211!4.52e-15!60;CL:0000680!5.90e-15!57;CL:0000056!5.90e-15!57;CL:0000355!5.90e-15!57;CL:0000187!7.13e-15!54;CL:0000183!4.72e-14!59;CL:0000192!2.62e-12!42;CL:0000514!2.62e-12!42;CL:0000222!4.69e-12!119;CL:0000359!1.29e-11!32;CL:0000048!1.35e-10!430;CL:0000723!1.80e-10!436;CL:0000034!6.63e-10!444;CL:0000220!6.38e-09!246;CL:0000055!1.06e-08!180;CL:0002321!1.46e-08!248|ontology_enrichment_celltype_v019=CL:0000359;1.33e-12;32!CL:0000192;5.70e-09;43!CL:0002592;2.16e-08;3!CL:0002328;6.57e-08;3!CL:0000187;2.72e-07;55!CL:0000393;4.19e-07;61!CL:0000211;4.19e-07;61|ontology_enrichment_celltype_v019_2=CL:0000187,4.22e-14,55;CL:0000393,1.26e-13,61;CL:0000211,1.26e-13,61;CL:0000680,4.46e-13,58;CL:0000056,4.46e-13,58;CL:0000355,4.46e-13,58;CL:0000192,3.29e-12,43;CL:0000514,3.29e-12,43;CL:0000359,3.33e-12,32;CL:0000222,1.14e-09,121;CL:0002592,2.81e-08,3;CL:0002328,8.25e-08,3;CL:0000048,1.61e-07,427;CL:0000723,3.27e-07,433;CL:0000034,8.10e-07,441|ontology_enrichment_development_v019=CL:0000514;5.70e-09;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.87e-13!83;UBERON:0002329!1.87e-13!83;UBERON:0003077!1.87e-13!83;UBERON:0003059!1.87e-13!83;UBERON:0007282!1.87e-13!83;UBERON:0009618!1.87e-13!83;UBERON:0007285!1.87e-13!83;UBERON:0000486!7.33e-13!82;UBERON:0004290!1.03e-12!70;UBERON:0001134!1.12e-12!61;UBERON:0002036!1.12e-12!61;UBERON:0003082!1.12e-12!61;UBERON:0002204!2.27e-12!167;UBERON:0002385!1.13e-11!63;UBERON:0001015!1.13e-11!63;UBERON:0000383!1.13e-11!63;UBERON:0000490!1.22e-08!138;UBERON:0005256!2.85e-08!143;UBERON:0001637!4.66e-08!42;UBERON:0003509!4.66e-08!42;UBERON:0004572!4.66e-08!42;UBERON:0002049!9.17e-07!79;UBERON:0007798!9.17e-07!79;UBERON:0001981!9.27e-07!60;UBERON:0007500!9.27e-07!60;UBERON:0004537!9.27e-07!60;UBERON:0006965!9.27e-07!60|ontology_enrichment_uberon_v019=UBERON:0003498;2.16e-08;3!UBERON:0005985;2.16e-08;3!UBERON:0001621;2.16e-08;3!UBERON:0004815;6.57e-08;3!UBERON:0002031;6.57e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.60e-15,78;UBERON:0002329,1.58e-14,71;UBERON:0003059,1.58e-14,71;UBERON:0007282,1.58e-14,71;UBERON:0004290,1.58e-14,71;UBERON:0009618,1.58e-14,71;UBERON:0003077,3.13e-14,72;UBERON:0007285,3.13e-14,72;UBERON:0007524,6.08e-14,73;UBERON:0003498,9.91e-13,5;UBERON:0005985,9.91e-13,5;UBERON:0000486,1.62e-12,83;UBERON:0001134,7.18e-12,62;UBERON:0002036,7.18e-12,62;UBERON:0003082,7.18e-12,62;UBERON:0002385,2.51e-11,64;UBERON:0001015,2.51e-11,64;UBERON:0000383,2.51e-11,64;UBERON:0002204,2.07e-10,167;UBERON:0001637,1.79e-08,42;UBERON:0003509,1.79e-08,42;UBERON:0004572,1.79e-08,42;UBERON:0001621,2.81e-08,3;UBERON:0003104,2.88e-08,160;UBERON:0009142,2.88e-08,160;UBERON:0005256,5.40e-08,122;UBERON:0004815,8.25e-08,3;UBERON:0002031,8.25e-08,3;UBERON:0000490,2.32e-07,148|phase1_expression=0.54503513781167,0.214100523890983,0,1.0007329835313,0.446961094427288,6.97870819280295,0,0,0,0.245733936501509,2.09340350391728,0.218441372130172,0.263766978228454,0.618831764800233,3.97676850873499,0.672325146451775,1.20538905604795,2.19093027116212,0.975865597581014,0.123121058076788,2.24400760368678,0,0.572471974262113,0.547497700291537,0.753255837568817,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,10.1136334692682,1.50602959389125,1.10926203050036,0,0,0.293600439334847,2.21598163412751,0,0,1.34349284543955,0.32389366601898,0.257575567634187,0.145398238779565,0,0.485168122375632,0.697287110717054,0.411167888021826,0.929119112685311,1.1507695692886,0.256160706529101,0.945928919554341,0.344745680736619,0,0,0,0,0.224723484445085,0.918251677112708,0,0,0.659702600373432,0,0.426224750532694,0.580418477257168,0,0,1.25624332628372,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0,0,0.419317291016752,0,0,0,1.71007646244749,0.19891667719909,0.547992461293902,0,2.18455444504853,0,1.70692089026603,1.20118796110804,1.14950487990897,1.98313461835459,1.90810750907073,0.569212969109448,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0.589211814949674,0,0,0.896639238079726,0.780356085359269,1.80881695064044,0.829050053357545,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0,1.27426165729639,0.651083453856419,1.90090408889675,0.150575119077773,0.127986611154418,0,0.947109008176067,0.821127996921047,0.80642697289893,0,0.434473211648397,0,0.670700859703636,0.639312809217652,0.361439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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=129293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27013 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=333bp_to_ENST00000474298,ENST00000489999_5end | |||
|description=CAGE_peak_5_at_C2orf89_5end | |||
|id=chr2:85133792..85133798,- | |||
|ontology_enrichment_celltype=CL:0002371!4.84e-17!591;CL:0000003!9.03e-17!722;CL:0000548!3.92e-16!679;CL:0000004!3.92e-16!679;CL:0000255!3.92e-16!679;CL:0000012!5.41e-16!682;CL:0000144!7.08e-16!625;CL:0000393!4.52e-15!60;CL:0000211!4.52e-15!60;CL:0000680!5.90e-15!57;CL:0000056!5.90e-15!57;CL:0000355!5.90e-15!57;CL:0000187!7.13e-15!54;CL:0000183!4.72e-14!59;CL:0000192!2.62e-12!42;CL:0000514!2.62e-12!42;CL:0000222!4.69e-12!119;CL:0000359!1.29e-11!32;CL:0000048!1.35e-10!430;CL:0000723!1.80e-10!436;CL:0000034!6.63e-10!444;CL:0000220!6.38e-09!246;CL:0000055!1.06e-08!180;CL:0002321!1.46e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.33e-12;32!CL:0000192;5.70e-09;43!CL:0002592;2.16e-08;3!CL:0002328;6.57e-08;3!CL:0000187;2.72e-07;55!CL:0000393;4.19e-07;61!CL:0000211;4.19e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,4.22e-14,55;CL:0000393,1.26e-13,61;CL:0000211,1.26e-13,61;CL:0000680,4.46e-13,58;CL:0000056,4.46e-13,58;CL:0000355,4.46e-13,58;CL:0000192,3.29e-12,43;CL:0000514,3.29e-12,43;CL:0000359,3.33e-12,32;CL:0000222,1.14e-09,121;CL:0002592,2.81e-08,3;CL:0002328,8.25e-08,3;CL:0000048,1.61e-07,427;CL:0000723,3.27e-07,433;CL:0000034,8.10e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;5.70e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.87e-13!83;UBERON:0002329!1.87e-13!83;UBERON:0003077!1.87e-13!83;UBERON:0003059!1.87e-13!83;UBERON:0007282!1.87e-13!83;UBERON:0009618!1.87e-13!83;UBERON:0007285!1.87e-13!83;UBERON:0000486!7.33e-13!82;UBERON:0004290!1.03e-12!70;UBERON:0001134!1.12e-12!61;UBERON:0002036!1.12e-12!61;UBERON:0003082!1.12e-12!61;UBERON:0002204!2.27e-12!167;UBERON:0002385!1.13e-11!63;UBERON:0001015!1.13e-11!63;UBERON:0000383!1.13e-11!63;UBERON:0000490!1.22e-08!138;UBERON:0005256!2.85e-08!143;UBERON:0001637!4.66e-08!42;UBERON:0003509!4.66e-08!42;UBERON:0004572!4.66e-08!42;UBERON:0002049!9.17e-07!79;UBERON:0007798!9.17e-07!79;UBERON:0001981!9.27e-07!60;UBERON:0007500!9.27e-07!60;UBERON:0004537!9.27e-07!60;UBERON:0006965!9.27e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;2.16e-08;3!UBERON:0005985;2.16e-08;3!UBERON:0001621;2.16e-08;3!UBERON:0004815;6.57e-08;3!UBERON:0002031;6.57e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.60e-15,78;UBERON:0002329,1.58e-14,71;UBERON:0003059,1.58e-14,71;UBERON:0007282,1.58e-14,71;UBERON:0004290,1.58e-14,71;UBERON:0009618,1.58e-14,71;UBERON:0003077,3.13e-14,72;UBERON:0007285,3.13e-14,72;UBERON:0007524,6.08e-14,73;UBERON:0003498,9.91e-13,5;UBERON:0005985,9.91e-13,5;UBERON:0000486,1.62e-12,83;UBERON:0001134,7.18e-12,62;UBERON:0002036,7.18e-12,62;UBERON:0003082,7.18e-12,62;UBERON:0002385,2.51e-11,64;UBERON:0001015,2.51e-11,64;UBERON:0000383,2.51e-11,64;UBERON:0002204,2.07e-10,167;UBERON:0001637,1.79e-08,42;UBERON:0003509,1.79e-08,42;UBERON:0004572,1.79e-08,42;UBERON:0001621,2.81e-08,3;UBERON:0003104,2.88e-08,160;UBERON:0009142,2.88e-08,160;UBERON:0005256,5.40e-08,122;UBERON:0004815,8.25e-08,3;UBERON:0002031,8.25e-08,3;UBERON:0000490,2.32e-07,148 | |||
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| |||
|short_description=p5@C2orf89 | |||
}} |
Revision as of 19:57, 12 September 2013
Short description: | p5@C2orf89 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_C2orf89_5end |
Coexpression cluster: | NA |
Association with transcript: | 333bp_to_ENST00000474298, ENST00000489999_5end |
EntrezGene: | C2orf89 |
HGNC: | 27013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 4.22e-14 | 55 |
electrically responsive cell | 1.26e-13 | 61 |
electrically active cell | 1.26e-13 | 61 |
muscle precursor cell | 4.46e-13 | 58 |
myoblast | 4.46e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.46e-13 | 58 |
smooth muscle cell | 3.29e-12 | 43 |
smooth muscle myoblast | 3.29e-12 | 43 |
vascular associated smooth muscle cell | 3.33e-12 | 32 |
mesodermal cell | 1.14e-09 | 121 |
smooth muscle cell of the coronary artery | 2.81e-08 | 3 |
bronchial epithelial cell | 8.25e-08 | 3 |
multi fate stem cell | 1.61e-07 | 427 |
somatic stem cell | 3.27e-07 | 433 |
stem cell | 8.10e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.60e-15 | 78 |
somite | 1.58e-14 | 71 |
presomitic mesoderm | 1.58e-14 | 71 |
presumptive segmental plate | 1.58e-14 | 71 |
dermomyotome | 1.58e-14 | 71 |
trunk paraxial mesoderm | 1.58e-14 | 71 |
paraxial mesoderm | 3.13e-14 | 72 |
presumptive paraxial mesoderm | 3.13e-14 | 72 |
dense mesenchyme tissue | 6.08e-14 | 73 |
heart blood vessel | 9.91e-13 | 5 |
coronary vessel | 9.91e-13 | 5 |
multilaminar epithelium | 1.62e-12 | 83 |
skeletal muscle tissue | 7.18e-12 | 62 |
striated muscle tissue | 7.18e-12 | 62 |
myotome | 7.18e-12 | 62 |
muscle tissue | 2.51e-11 | 64 |
musculature | 2.51e-11 | 64 |
musculature of body | 2.51e-11 | 64 |
musculoskeletal system | 2.07e-10 | 167 |
artery | 1.79e-08 | 42 |
arterial blood vessel | 1.79e-08 | 42 |
arterial system | 1.79e-08 | 42 |
coronary artery | 2.81e-08 | 3 |
mesenchyme | 2.88e-08 | 160 |
entire embryonic mesenchyme | 2.88e-08 | 160 |
trunk mesenchyme | 5.40e-08 | 122 |
lower respiratory tract epithelium | 8.25e-08 | 3 |
epithelium of bronchus | 8.25e-08 | 3 |
unilaminar epithelium | 2.32e-07 | 148 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.