FFCP PHASE1:Mm9::chr11:5798620..5798635,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1573|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:5798620..5798635,-|id=chr11:5798620..5798635,-|ontology_enrichment_celltype=CL:0002076!1.24e-07!15;CL:0002563!2.91e-07!9;CL:0002251!2.91e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,1.58e-10,25;CL:0000682,2.26e-10,3;CL:0000068,8.56e-10,3;CL:0002202,8.56e-10,3;CL:0000069,8.56e-10,3;CL:0002632,8.56e-10,3;CL:0002368,8.56e-10,3;CL:0000307,8.56e-10,3;CL:0000377,8.56e-10,3;CL:0002076,5.71e-09,15;CL:0000239,4.36e-08,6;CL:0000677,4.36e-08,6;CL:0000584,4.36e-08,6;CL:0000075,6.15e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.65e-13!15;UBERON:0007100!4.91e-13!18;UBERON:0000948!4.91e-13!18;UBERON:0005498!4.91e-13!18;UBERON:0004140!4.91e-13!18;UBERON:0009881!4.91e-13!18;UBERON:0004141!4.91e-13!18;UBERON:0003084!4.91e-13!18;UBERON:0007005!4.91e-13!18;UBERON:0004139!4.91e-13!18;UBERON:0004291!4.91e-13!18;UBERON:0001242!4.46e-11!13;UBERON:0000060!4.46e-11!13;UBERON:0001262!4.46e-11!13;UBERON:0004786!4.46e-11!13;UBERON:0005409!4.87e-10!59;UBERON:0004535!4.23e-09!23;UBERON:0001009!4.23e-09!23;UBERON:0005178!2.36e-08!17;UBERON:0005181!2.36e-08!17;UBERON:0002224!2.36e-08!17;UBERON:0000915!2.36e-08!17;UBERON:0008947!2.36e-08!17;UBERON:0003258!2.36e-08!17;UBERON:0001007!2.64e-08!128;UBERON:0001555!2.64e-08!128;UBERON:0007026!2.64e-08!128;UBERON:0004119!5.74e-08!130;UBERON:0000925!5.74e-08!130;UBERON:0006595!5.74e-08!130;UBERON:0004923!1.24e-07!24;UBERON:0003350!2.91e-07!9;UBERON:0004808!2.91e-07!9;UBERON:0001277!2.91e-07!9;UBERON:0004921!3.11e-07!126;UBERON:0004185!3.11e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.14e-15,15;UBERON:0001242,2.11e-10,13;UBERON:0001262,2.11e-10,13;UBERON:0004786,2.11e-10,13;UBERON:0005409,4.74e-10,47;UBERON:0003126,8.56e-10,3;UBERON:0001005,8.56e-10,3;UBERON:0007196,8.56e-10,3;UBERON:0001558,8.56e-10,3;UBERON:0007100,7.41e-09,18;UBERON:0000948,7.41e-09,18;UBERON:0005498,7.41e-09,18;UBERON:0004140,7.41e-09,18;UBERON:0009881,7.41e-09,18;UBERON:0004141,7.41e-09,18;UBERON:0003084,7.41e-09,18;UBERON:0007005,7.41e-09,18;UBERON:0004139,7.41e-09,18;UBERON:0004291,7.41e-09,18;UBERON:0004923,9.24e-09,24;UBERON:0001962,2.06e-07,2;UBERON:0001961,2.06e-07,2;UBERON:0001744,2.06e-07,2|phase1_expression=0,1.39590163055744,1.36499771816861,0.30246421130683,0,1.17515490338323,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.44113921600755,2.8711598205751,3.01533397311352,3.66301095566011,0.570070258369122,1.26015064879965,9.75614246883341,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,2.53359865475099,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,1.17263029990548,1.08037236876609,0.23674473558521,0.590292695242212,0.925602677324269,0.465067889500816,1.07309360559848,1.05088808130453,0.658239399653922,0.820837320395476,0.729619285912702,1.60819986167866,1.97595103761946,2.28150911892632,0,0,1.32167513193519,0.528901133327089,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0.864552199498777,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0.874442509889552,0,0,0.206386867963223,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,0.756037385752609,2.29997125615916,4.14888871117737,3.2367443132357,2.23164330458407,2.35580347785627,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0|short_description=p@chr11:5798620..5798635,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1573 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:5798620..5798635,- | |||
|id=chr11:5798620..5798635,- | |||
|ontology_enrichment_celltype=CL:0002076!1.24e-07!15;CL:0002563!2.91e-07!9;CL:0002251!2.91e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.58e-10,25;CL:0000682,2.26e-10,3;CL:0000068,8.56e-10,3;CL:0002202,8.56e-10,3;CL:0000069,8.56e-10,3;CL:0002632,8.56e-10,3;CL:0002368,8.56e-10,3;CL:0000307,8.56e-10,3;CL:0000377,8.56e-10,3;CL:0002076,5.71e-09,15;CL:0000239,4.36e-08,6;CL:0000677,4.36e-08,6;CL:0000584,4.36e-08,6;CL:0000075,6.15e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.65e-13!15;UBERON:0007100!4.91e-13!18;UBERON:0000948!4.91e-13!18;UBERON:0005498!4.91e-13!18;UBERON:0004140!4.91e-13!18;UBERON:0009881!4.91e-13!18;UBERON:0004141!4.91e-13!18;UBERON:0003084!4.91e-13!18;UBERON:0007005!4.91e-13!18;UBERON:0004139!4.91e-13!18;UBERON:0004291!4.91e-13!18;UBERON:0001242!4.46e-11!13;UBERON:0000060!4.46e-11!13;UBERON:0001262!4.46e-11!13;UBERON:0004786!4.46e-11!13;UBERON:0005409!4.87e-10!59;UBERON:0004535!4.23e-09!23;UBERON:0001009!4.23e-09!23;UBERON:0005178!2.36e-08!17;UBERON:0005181!2.36e-08!17;UBERON:0002224!2.36e-08!17;UBERON:0000915!2.36e-08!17;UBERON:0008947!2.36e-08!17;UBERON:0003258!2.36e-08!17;UBERON:0001007!2.64e-08!128;UBERON:0001555!2.64e-08!128;UBERON:0007026!2.64e-08!128;UBERON:0004119!5.74e-08!130;UBERON:0000925!5.74e-08!130;UBERON:0006595!5.74e-08!130;UBERON:0004923!1.24e-07!24;UBERON:0003350!2.91e-07!9;UBERON:0004808!2.91e-07!9;UBERON:0001277!2.91e-07!9;UBERON:0004921!3.11e-07!126;UBERON:0004185!3.11e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.14e-15,15;UBERON:0001242,2.11e-10,13;UBERON:0001262,2.11e-10,13;UBERON:0004786,2.11e-10,13;UBERON:0005409,4.74e-10,47;UBERON:0003126,8.56e-10,3;UBERON:0001005,8.56e-10,3;UBERON:0007196,8.56e-10,3;UBERON:0001558,8.56e-10,3;UBERON:0007100,7.41e-09,18;UBERON:0000948,7.41e-09,18;UBERON:0005498,7.41e-09,18;UBERON:0004140,7.41e-09,18;UBERON:0009881,7.41e-09,18;UBERON:0004141,7.41e-09,18;UBERON:0003084,7.41e-09,18;UBERON:0007005,7.41e-09,18;UBERON:0004139,7.41e-09,18;UBERON:0004291,7.41e-09,18;UBERON:0004923,9.24e-09,24;UBERON:0001962,2.06e-07,2;UBERON:0001961,2.06e-07,2;UBERON:0001744,2.06e-07,2 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,0.30246421130683,0,1.17515490338323,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.44113921600755,2.8711598205751,3.01533397311352,3.66301095566011,0.570070258369122,1.26015064879965,9.75614246883341,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,2.53359865475099,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,1.17263029990548,1.08037236876609,0.23674473558521,0.590292695242212,0.925602677324269,0.465067889500816,1.07309360559848,1.05088808130453,0.658239399653922,0.820837320395476,0.729619285912702,1.60819986167866,1.97595103761946,2.28150911892632,0,0,1.32167513193519,0.528901133327089,0,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0.864552199498777,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0.874442509889552,0,0,0.206386867963223,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,0.756037385752609,2.29997125615916,4.14888871117737,3.2367443132357,2.23164330458407,2.35580347785627,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p@chr11:5798620..5798635,- | |||
}} |
Revision as of 20:06, 12 September 2013
Short description: | p@chr11:5798620..5798635, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5798620..5798635, - |
Coexpression cluster: | MCL_coexpression_mm9:1573 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.58e-10 | 25 |
M cell of gut | 2.26e-10 | 3 |
duct epithelial cell | 8.56e-10 | 3 |
epithelial cell of tracheobronchial tree | 8.56e-10 | 3 |
branched duct epithelial cell | 8.56e-10 | 3 |
epithelial cell of lower respiratory tract | 8.56e-10 | 3 |
respiratory epithelial cell | 8.56e-10 | 3 |
tracheal epithelial cell | 8.56e-10 | 3 |
tracheoblast | 8.56e-10 | 3 |
endo-epithelial cell | 5.71e-09 | 15 |
brush border epithelial cell | 4.36e-08 | 6 |
gut absorptive cell | 4.36e-08 | 6 |
enterocyte | 4.36e-08 | 6 |
columnar/cuboidal epithelial cell | 6.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.14e-15 | 15 |
intestinal mucosa | 2.11e-10 | 13 |
wall of intestine | 2.11e-10 | 13 |
gastrointestinal system mucosa | 2.11e-10 | 13 |
gastrointestinal system | 4.74e-10 | 47 |
trachea | 8.56e-10 | 3 |
respiratory airway | 8.56e-10 | 3 |
tracheobronchial tree | 8.56e-10 | 3 |
lower respiratory tract | 8.56e-10 | 3 |
primary circulatory organ | 7.41e-09 | 18 |
heart | 7.41e-09 | 18 |
primitive heart tube | 7.41e-09 | 18 |
primary heart field | 7.41e-09 | 18 |
anterior lateral plate mesoderm | 7.41e-09 | 18 |
heart tube | 7.41e-09 | 18 |
heart primordium | 7.41e-09 | 18 |
cardiac mesoderm | 7.41e-09 | 18 |
cardiogenic plate | 7.41e-09 | 18 |
heart rudiment | 7.41e-09 | 18 |
organ component layer | 9.24e-09 | 24 |
gut-associated lymphoid tissue | 2.06e-07 | 2 |
mucosa-associated lymphoid tissue | 2.06e-07 | 2 |
lymphoid tissue | 2.06e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.