FFCP PHASE1:Mm9::chr11:79341680..79341694,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:79341680..79341694,+|id=chr11:79341680..79341694,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,3.67e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.82e-23,3;DOID:4045,2.82e-23,3;DOID:0050686,5.76e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.83e-11,32;UBERON:0001134,3.67e-08,9;UBERON:0002036,3.67e-08,9;UBERON:0002385,3.67e-08,9;UBERON:0000486,3.67e-08,9;UBERON:0007503,3.67e-08,9;UBERON:0001015,3.67e-08,9;UBERON:0002329,3.67e-08,9;UBERON:0003082,3.67e-08,9;UBERON:0003059,3.67e-08,9;UBERON:0007282,3.67e-08,9;UBERON:0004290,3.67e-08,9;UBERON:0009618,3.67e-08,9;UBERON:0000383,2.14e-07,10;UBERON:0007524,9.10e-07,11;UBERON:0003077,9.10e-07,11;UBERON:0007285,9.10e-07,11|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0.607425802169478,0,0.946386496074713,1.23402990245165,0.84877930359606,0,0.397163804803541,0.783599367416806,0.47997726838022,0,0.57423196411502,3.01533397311352,0.646413698057667,0,0,0.443461021310609,0,0,0,0,0,0,17.996860121687,8.5946887897618,16.2292360631877,18.8234076169925,13.6609096991689,12.1377588257788,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0.161766849947409,0,0.969750506270444,0,0,0,0,0.359445373517761,0,0.381210681219194,0.149790639404823,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,2.57347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0.206386867963223,1.48155621895769,0.753473828018764,0,0.228778173206523,0.339956859987711,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr11:79341680..79341694,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:79341680..79341694,+ | |||
|id=chr11:79341680..79341694,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.67e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.82e-23,3;DOID:4045,2.82e-23,3;DOID:0050686,5.76e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,8.83e-11,32;UBERON:0001134,3.67e-08,9;UBERON:0002036,3.67e-08,9;UBERON:0002385,3.67e-08,9;UBERON:0000486,3.67e-08,9;UBERON:0007503,3.67e-08,9;UBERON:0001015,3.67e-08,9;UBERON:0002329,3.67e-08,9;UBERON:0003082,3.67e-08,9;UBERON:0003059,3.67e-08,9;UBERON:0007282,3.67e-08,9;UBERON:0004290,3.67e-08,9;UBERON:0009618,3.67e-08,9;UBERON:0000383,2.14e-07,10;UBERON:0007524,9.10e-07,11;UBERON:0003077,9.10e-07,11;UBERON:0007285,9.10e-07,11 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0.607425802169478,0,0.946386496074713,1.23402990245165,0.84877930359606,0,0.397163804803541,0.783599367416806,0.47997726838022,0,0.57423196411502,3.01533397311352,0.646413698057667,0,0,0.443461021310609,0,0,0,0,0,0,17.996860121687,8.5946887897618,16.2292360631877,18.8234076169925,13.6609096991689,12.1377588257788,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0.144599356919912,1.76922110389975,0.161766849947409,0,0.969750506270444,0,0,0,0,0.359445373517761,0,0.381210681219194,0.149790639404823,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,2.57347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0.206386867963223,1.48155621895769,0.753473828018764,0,0.228778173206523,0.339956859987711,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr11:79341680..79341694,+ | |||
}} |
Revision as of 21:06, 12 September 2013
Short description: | p@chr11:79341680..79341694, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:79341680..79341694, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.67e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 8.83e-11 | 32 |
skeletal muscle tissue | 3.67e-08 | 9 |
striated muscle tissue | 3.67e-08 | 9 |
muscle tissue | 3.67e-08 | 9 |
multilaminar epithelium | 3.67e-08 | 9 |
epithelial vesicle | 3.67e-08 | 9 |
musculature | 3.67e-08 | 9 |
somite | 3.67e-08 | 9 |
myotome | 3.67e-08 | 9 |
presomitic mesoderm | 3.67e-08 | 9 |
presumptive segmental plate | 3.67e-08 | 9 |
dermomyotome | 3.67e-08 | 9 |
trunk paraxial mesoderm | 3.67e-08 | 9 |
musculature of body | 2.14e-07 | 10 |
dense mesenchyme tissue | 9.10e-07 | 11 |
paraxial mesoderm | 9.10e-07 | 11 |
presumptive paraxial mesoderm | 9.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.82e-23 | 3 |
muscle cancer | 2.82e-23 | 3 |
organ system cancer | 5.76e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.