FFCP PHASE1:Mm9::chr11:83561778..83561820,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:83561778..83561820,+|id=chr11:83561778..83561820,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,7.86e-12,9;CL:0000182,1.79e-09,5|ontology_enrichment_disease=DOID:0060100!1.62e-14!3;DOID:4045!1.62e-14!3;DOID:0050686!1.77e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,6.12e-34,3;DOID:4045,6.12e-34,3;DOID:0050686,2.19e-17,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.86e-12,9;UBERON:0002036,7.86e-12,9;UBERON:0002385,7.86e-12,9;UBERON:0000486,7.86e-12,9;UBERON:0007503,7.86e-12,9;UBERON:0001015,7.86e-12,9;UBERON:0002329,7.86e-12,9;UBERON:0003082,7.86e-12,9;UBERON:0003059,7.86e-12,9;UBERON:0007282,7.86e-12,9;UBERON:0004290,7.86e-12,9;UBERON:0009618,7.86e-12,9;UBERON:0000383,1.03e-10,10;UBERON:0007524,8.45e-10,11;UBERON:0003077,8.45e-10,11;UBERON:0007285,8.45e-10,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11503772252743,12.5013655123808,7.32933241563318,11.1763982725893,4.09827290975067,6.311634589405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,2.15881276655127,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:83561778..83561820,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:83561778..83561820,+ | |||
|id=chr11:83561778..83561820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,7.86e-12,9;CL:0000182,1.79e-09,5 | |||
|ontology_enrichment_disease=DOID:0060100!1.62e-14!3;DOID:4045!1.62e-14!3;DOID:0050686!1.77e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.12e-34,3;DOID:4045,6.12e-34,3;DOID:0050686,2.19e-17,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.86e-12,9;UBERON:0002036,7.86e-12,9;UBERON:0002385,7.86e-12,9;UBERON:0000486,7.86e-12,9;UBERON:0007503,7.86e-12,9;UBERON:0001015,7.86e-12,9;UBERON:0002329,7.86e-12,9;UBERON:0003082,7.86e-12,9;UBERON:0003059,7.86e-12,9;UBERON:0007282,7.86e-12,9;UBERON:0004290,7.86e-12,9;UBERON:0009618,7.86e-12,9;UBERON:0000383,1.03e-10,10;UBERON:0007524,8.45e-10,11;UBERON:0003077,8.45e-10,11;UBERON:0007285,8.45e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11503772252743,12.5013655123808,7.32933241563318,11.1763982725893,4.09827290975067,6.311634589405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,2.15881276655127,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:83561778..83561820,+ | |||
}} |
Revision as of 21:12, 12 September 2013
Short description: | p@chr11:83561778..83561820, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:83561778..83561820, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 7.86e-12 | 9 |
hepatocyte | 1.79e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 7.86e-12 | 9 |
striated muscle tissue | 7.86e-12 | 9 |
muscle tissue | 7.86e-12 | 9 |
multilaminar epithelium | 7.86e-12 | 9 |
epithelial vesicle | 7.86e-12 | 9 |
musculature | 7.86e-12 | 9 |
somite | 7.86e-12 | 9 |
myotome | 7.86e-12 | 9 |
presomitic mesoderm | 7.86e-12 | 9 |
presumptive segmental plate | 7.86e-12 | 9 |
dermomyotome | 7.86e-12 | 9 |
trunk paraxial mesoderm | 7.86e-12 | 9 |
musculature of body | 1.03e-10 | 10 |
dense mesenchyme tissue | 8.45e-10 | 11 |
paraxial mesoderm | 8.45e-10 | 11 |
presumptive paraxial mesoderm | 8.45e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.12e-34 | 3 |
muscle cancer | 6.12e-34 | 3 |
organ system cancer | 2.19e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.