FFCP PHASE1:Hg19::chr3:187870761..187870768,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4026|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6679|TSSclassifier=W|UniProt=C9JUT4|association_with_transcript=-303bp_to_ENST00000448637_5end|description=CAGE_peak_34_at_LPP_5end|id=chr3:187870761..187870768,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002327;8.69e-18;4!CL:0002537;1.60e-14;5|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4;CL:0002537,1.60e-14,5|ontology_enrichment_development_v019=UBERON:0008425;2.39e-66;1|ontology_enrichment_disease=DOID:305!1.72e-10!106;DOID:0050687!3.39e-08!143;DOID:1749!3.54e-08!14|ontology_enrichment_disease_v019=DOID:5093;8.69e-18;4!DOID:1612;8.69e-18;4|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:7,6.83e-08,39|ontology_enrichment_uberon=UBERON:0001155!2.44e-09!9;UBERON:0005631!3.74e-09!14;UBERON:0000158!3.74e-09!14;UBERON:0004119!3.85e-08!169;UBERON:0000925!3.85e-08!169;UBERON:0006595!3.85e-08!169;UBERON:0002294!2.23e-07!7;UBERON:0001173!2.23e-07!7;UBERON:0004912!2.23e-07!7;UBERON:0000059!2.68e-07!11;UBERON:0001007!4.21e-07!155;UBERON:0001555!4.21e-07!155;UBERON:0007026!4.21e-07!155|ontology_enrichment_uberon_v019=UBERON:0001911;8.69e-18;4!UBERON:0002394;8.69e-18;4!UBERON:0003928;8.69e-18;4!UBERON:0000305;8.99e-11;7!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0000310;6.13e-08;10!UBERON:0000058;6.13e-08;10!UBERON:0005631;6.13e-08;10!UBERON:0000158;6.13e-08;10!UBERON:0001443;2.47e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0000305,8.99e-11,7;UBERON:0000076,1.24e-09,8;UBERON:0004871,1.35e-09,8;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.290033387828457,0,0,0.165284915360978,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.748562161632879,0.146508179271894,0,0,0,0.71623345421307,1.48482340416319,0.921482106297696,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.449341755736634,1.25314822272926,0,0.493217028184668,0,0,0,0,0,0.7812832832557,1.57427999993152,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0.46112780877612,0.807818799687949,0.760531603454056,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.796118080530053,0.611030144933625,0,0,0,0,0,0,0,0.782658475728359,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0.293977192243133,0.522355239482415,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.164230914106418,0.969890164884194,0.176512253383001,0.225980740780532,0,0,0,0.195551382734803,0.400794101257669,0.426905989478705,0,0,0,0,0.14405479798815,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.157363764404994,0,0,0.575745591958336,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0.704815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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |||
|TSSclassifier=W | |||
|UniProt=C9JUT4 | |||
|association_with_transcript=-303bp_to_ENST00000448637_5end | |||
|description=CAGE_peak_34_at_LPP_5end | |||
|id=chr3:187870761..187870768,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;8.69e-18;4!CL:0002537;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4;CL:0002537,1.60e-14,5 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.39e-66;1 | |||
|ontology_enrichment_disease=DOID:305!1.72e-10!106;DOID:0050687!3.39e-08!143;DOID:1749!3.54e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.69e-18;4!DOID:1612;8.69e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:7,6.83e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001155!2.44e-09!9;UBERON:0005631!3.74e-09!14;UBERON:0000158!3.74e-09!14;UBERON:0004119!3.85e-08!169;UBERON:0000925!3.85e-08!169;UBERON:0006595!3.85e-08!169;UBERON:0002294!2.23e-07!7;UBERON:0001173!2.23e-07!7;UBERON:0004912!2.23e-07!7;UBERON:0000059!2.68e-07!11;UBERON:0001007!4.21e-07!155;UBERON:0001555!4.21e-07!155;UBERON:0007026!4.21e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;8.69e-18;4!UBERON:0002394;8.69e-18;4!UBERON:0003928;8.69e-18;4!UBERON:0000305;8.99e-11;7!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0000310;6.13e-08;10!UBERON:0000058;6.13e-08;10!UBERON:0005631;6.13e-08;10!UBERON:0000158;6.13e-08;10!UBERON:0001443;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0000305,8.99e-11,7;UBERON:0000076,1.24e-09,8;UBERON:0004871,1.35e-09,8;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11 | |||
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|short_description=p34@LPP | |||
}} |
Revision as of 23:14, 12 September 2013
Short description: | p34@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_LPP_5end |
Coexpression cluster: | NA |
Association with transcript: | -303bp_to_ENST00000448637_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9JUT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
amnion mesenchymal stem cell | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
bile duct | 2.74e-12 | 6 |
digestive system duct | 2.74e-12 | 6 |
amnion | 8.99e-11 | 7 |
external ectoderm | 1.24e-09 | 8 |
somatic layer of lateral plate mesoderm | 1.35e-09 | 8 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |
breast | 5.73e-08 | 10 |
chest | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |
disease of anatomical entity | 6.83e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.