FFCP PHASE1:Mm9::chr12:83347757..83347768,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:83347757..83347768,+|id=chr12:83347757..83347768,+|ontology_enrichment_celltype=CL:0000049!1.35e-08!19;CL:0000557!2.40e-08!7;CL:0000988!1.06e-07!32;CL:0002032!1.06e-07!32;CL:0000037!1.06e-07!32;CL:0000566!1.06e-07!32;CL:0000837!1.06e-07!32;CL:0000034!1.35e-07!97;CL:0000355!6.70e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,3.67e-08,9|ontology_enrichment_disease=DOID:0060100!1.77e-12!3;DOID:4045!1.77e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.82e-23,3;DOID:4045,2.82e-23,3;DOID:0050686,5.76e-12,6|ontology_enrichment_uberon=UBERON:0002204!9.75e-10!32;UBERON:0001134!6.70e-07!9;UBERON:0002036!6.70e-07!9;UBERON:0002385!6.70e-07!9;UBERON:0000486!6.70e-07!9;UBERON:0001015!6.70e-07!9;UBERON:0004290!6.70e-07!9;UBERON:0003082!6.70e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.67e-08,9;UBERON:0002036,3.67e-08,9;UBERON:0002385,3.67e-08,9;UBERON:0000486,3.67e-08,9;UBERON:0007503,3.67e-08,9;UBERON:0001015,3.67e-08,9;UBERON:0002329,3.67e-08,9;UBERON:0003082,3.67e-08,9;UBERON:0003059,3.67e-08,9;UBERON:0007282,3.67e-08,9;UBERON:0004290,3.67e-08,9;UBERON:0009618,3.67e-08,9;UBERON:0000383,2.14e-07,10;UBERON:0007524,9.10e-07,11;UBERON:0003077,9.10e-07,11;UBERON:0007285,9.10e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.996860121687,21.0960543021426,9.94695113550217,11.1763982725893,33.4692287629638,10.1957174136542,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,1.91704199209472,1.79970819298022,3.81210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,3.9782889915383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:83347757..83347768,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:83347757..83347768,+ | |||
|id=chr12:83347757..83347768,+ | |||
|ontology_enrichment_celltype=CL:0000049!1.35e-08!19;CL:0000557!2.40e-08!7;CL:0000988!1.06e-07!32;CL:0002032!1.06e-07!32;CL:0000037!1.06e-07!32;CL:0000566!1.06e-07!32;CL:0000837!1.06e-07!32;CL:0000034!1.35e-07!97;CL:0000355!6.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.67e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.77e-12!3;DOID:4045!1.77e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.82e-23,3;DOID:4045,2.82e-23,3;DOID:0050686,5.76e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!9.75e-10!32;UBERON:0001134!6.70e-07!9;UBERON:0002036!6.70e-07!9;UBERON:0002385!6.70e-07!9;UBERON:0000486!6.70e-07!9;UBERON:0001015!6.70e-07!9;UBERON:0004290!6.70e-07!9;UBERON:0003082!6.70e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.67e-08,9;UBERON:0002036,3.67e-08,9;UBERON:0002385,3.67e-08,9;UBERON:0000486,3.67e-08,9;UBERON:0007503,3.67e-08,9;UBERON:0001015,3.67e-08,9;UBERON:0002329,3.67e-08,9;UBERON:0003082,3.67e-08,9;UBERON:0003059,3.67e-08,9;UBERON:0007282,3.67e-08,9;UBERON:0004290,3.67e-08,9;UBERON:0009618,3.67e-08,9;UBERON:0000383,2.14e-07,10;UBERON:0007524,9.10e-07,11;UBERON:0003077,9.10e-07,11;UBERON:0007285,9.10e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.996860121687,21.0960543021426,9.94695113550217,11.1763982725893,33.4692287629638,10.1957174136542,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,1.91704199209472,1.79970819298022,3.81210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,3.9782889915383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:83347757..83347768,+ | |||
}} |
Revision as of 23:24, 12 September 2013
Short description: | p@chr12:83347757..83347768, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:83347757..83347768, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.67e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.67e-08 | 9 |
striated muscle tissue | 3.67e-08 | 9 |
muscle tissue | 3.67e-08 | 9 |
multilaminar epithelium | 3.67e-08 | 9 |
epithelial vesicle | 3.67e-08 | 9 |
musculature | 3.67e-08 | 9 |
somite | 3.67e-08 | 9 |
myotome | 3.67e-08 | 9 |
presomitic mesoderm | 3.67e-08 | 9 |
presumptive segmental plate | 3.67e-08 | 9 |
dermomyotome | 3.67e-08 | 9 |
trunk paraxial mesoderm | 3.67e-08 | 9 |
musculature of body | 2.14e-07 | 10 |
dense mesenchyme tissue | 9.10e-07 | 11 |
paraxial mesoderm | 9.10e-07 | 11 |
presumptive paraxial mesoderm | 9.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.82e-23 | 3 |
muscle cancer | 2.82e-23 | 3 |
organ system cancer | 5.76e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.