FFCP PHASE1:Mm9::chr12:91052016..91052057,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:91052016..91052057,+|id=chr12:91052016..91052057,+|ontology_enrichment_celltype=CL:0000540!2.90e-12!33;CL:0000047!2.90e-12!33;CL:0000031!2.90e-12!33;CL:0000404!2.90e-12!33;CL:0000117!2.58e-10!23;CL:0000337!2.58e-10!23;CL:0000393!9.12e-10!39;CL:0000211!9.12e-10!39;CL:0002319!1.69e-08!43;CL:0000221!3.22e-08!44;CL:0000133!3.22e-08!44;CL:0002612!7.80e-07!3;CL:0000055!8.74e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.62e-13!73;UBERON:0005743!8.62e-13!73;UBERON:0000073!2.84e-12!75;UBERON:0001016!2.84e-12!75;UBERON:0001049!2.94e-08!52;UBERON:0005068!2.94e-08!52;UBERON:0006241!2.94e-08!52;UBERON:0007135!2.94e-08!52;UBERON:0004121!4.62e-08!102;UBERON:0000924!4.62e-08!102;UBERON:0006601!4.62e-08!102;UBERON:0003076!7.33e-08!12;UBERON:0003057!7.33e-08!12;UBERON:0002346!2.39e-07!71;UBERON:0003075!2.39e-07!71;UBERON:0007284!2.39e-07!71;UBERON:0001948!5.51e-07!5;UBERON:0002315!5.51e-07!5;UBERON:0002020!6.40e-07!34;UBERON:0002257!7.80e-07!3;UBERON:0002616!9.53e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,14.6612694769419,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0.62336413367868,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr12:91052016..91052057,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:91052016..91052057,+ | |||
|id=chr12:91052016..91052057,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.90e-12!33;CL:0000047!2.90e-12!33;CL:0000031!2.90e-12!33;CL:0000404!2.90e-12!33;CL:0000117!2.58e-10!23;CL:0000337!2.58e-10!23;CL:0000393!9.12e-10!39;CL:0000211!9.12e-10!39;CL:0002319!1.69e-08!43;CL:0000221!3.22e-08!44;CL:0000133!3.22e-08!44;CL:0002612!7.80e-07!3;CL:0000055!8.74e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.62e-13!73;UBERON:0005743!8.62e-13!73;UBERON:0000073!2.84e-12!75;UBERON:0001016!2.84e-12!75;UBERON:0001049!2.94e-08!52;UBERON:0005068!2.94e-08!52;UBERON:0006241!2.94e-08!52;UBERON:0007135!2.94e-08!52;UBERON:0004121!4.62e-08!102;UBERON:0000924!4.62e-08!102;UBERON:0006601!4.62e-08!102;UBERON:0003076!7.33e-08!12;UBERON:0003057!7.33e-08!12;UBERON:0002346!2.39e-07!71;UBERON:0003075!2.39e-07!71;UBERON:0007284!2.39e-07!71;UBERON:0001948!5.51e-07!5;UBERON:0002315!5.51e-07!5;UBERON:0002020!6.40e-07!34;UBERON:0002257!7.80e-07!3;UBERON:0002616!9.53e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,14.6612694769419,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0.62336413367868,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:91052016..91052057,+ | |||
}} |
Revision as of 23:36, 12 September 2013
Short description: | p@chr12:91052016..91052057, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:91052016..91052057, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.54e-44 | 4 |
regional part of metencephalon | 4.54e-44 | 4 |
metencephalon | 4.54e-44 | 4 |
future metencephalon | 4.54e-44 | 4 |
rhombic lip | 4.54e-44 | 4 |
segmental subdivision of hindbrain | 6.66e-30 | 6 |
segmental subdivision of nervous system | 6.66e-30 | 6 |
hindbrain | 6.66e-30 | 6 |
presumptive hindbrain | 6.66e-30 | 6 |
posterior neural tube | 1.13e-15 | 12 |
chordal neural plate | 1.13e-15 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.