FFCP PHASE1:Mm9::chr13:38284416..38284429,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=373|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:38284416..38284429,+|id=chr13:38284416..38284429,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.88e-11!18;UBERON:0000948!1.88e-11!18;UBERON:0005498!1.88e-11!18;UBERON:0004140!1.88e-11!18;UBERON:0009881!1.88e-11!18;UBERON:0004141!1.88e-11!18;UBERON:0003084!1.88e-11!18;UBERON:0007005!1.88e-11!18;UBERON:0004139!1.88e-11!18;UBERON:0004291!1.88e-11!18;UBERON:0004535!8.74e-08!23;UBERON:0001009!8.74e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.13e-25,18;UBERON:0000948,1.13e-25,18;UBERON:0005498,1.13e-25,18;UBERON:0004140,1.13e-25,18;UBERON:0009881,1.13e-25,18;UBERON:0004141,1.13e-25,18;UBERON:0003084,1.13e-25,18;UBERON:0007005,1.13e-25,18;UBERON:0004139,1.13e-25,18;UBERON:0004291,1.13e-25,18;UBERON:0004535,1.38e-19,23;UBERON:0001009,1.38e-19,23;UBERON:0004872,6.05e-13,33;UBERON:0003103,4.46e-11,43;UBERON:0003914,4.35e-10,47;UBERON:0000165,2.84e-07,2;UBERON:0000166,2.84e-07,2;UBERON:0000930,2.84e-07,2|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,1.94633074457919,0.696504333044333,0.61734640922383,0,0,0,0,0.621377317606506,1.87620847984877,1.98068267607116,0.23674473558521,2.75469924446365,4.16521204795921,4.41814495025775,0.268273401399619,2.56883753207773,1.81015834904829,4.76085645829376,1.94565142910054,1.60819986167866,2.19550115291051,1.74468344388483,0,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,2.69645822596266,1.08069024937347,0.199141273254367,0,0,0,0.407302655690628,0,0.210407459670956,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,12.9391385874619,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0.32977250588296,0.968786560175433,0.482503399425247,1.07435109602823,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,1.08005340821801,1.04544148007234,2.40198820120795,0.539457385539283,0.165306911450672,0.523511883968059,1.16653475962614,1.24267862617385,0,0,0,0,0,0.506868376472335,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,1.1298205288131,0.25984164595559,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.609654453239999,0.201652370273681,0.194915761479505,0.384847366561318,0,1.13365191807606,0.221985953374065,0.269141569828427,1.00730769818447,0.19318959403219,0,0,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0.192906610981141,0.999242311751784,0,0.429742108096597,0,0,0|short_description=p@chr13:38284416..38284429,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=373 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:38284416..38284429,+ | |||
|id=chr13:38284416..38284429,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.88e-11!18;UBERON:0000948!1.88e-11!18;UBERON:0005498!1.88e-11!18;UBERON:0004140!1.88e-11!18;UBERON:0009881!1.88e-11!18;UBERON:0004141!1.88e-11!18;UBERON:0003084!1.88e-11!18;UBERON:0007005!1.88e-11!18;UBERON:0004139!1.88e-11!18;UBERON:0004291!1.88e-11!18;UBERON:0004535!8.74e-08!23;UBERON:0001009!8.74e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.13e-25,18;UBERON:0000948,1.13e-25,18;UBERON:0005498,1.13e-25,18;UBERON:0004140,1.13e-25,18;UBERON:0009881,1.13e-25,18;UBERON:0004141,1.13e-25,18;UBERON:0003084,1.13e-25,18;UBERON:0007005,1.13e-25,18;UBERON:0004139,1.13e-25,18;UBERON:0004291,1.13e-25,18;UBERON:0004535,1.38e-19,23;UBERON:0001009,1.38e-19,23;UBERON:0004872,6.05e-13,33;UBERON:0003103,4.46e-11,43;UBERON:0003914,4.35e-10,47;UBERON:0000165,2.84e-07,2;UBERON:0000166,2.84e-07,2;UBERON:0000930,2.84e-07,2 | |||
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,1.94633074457919,0.696504333044333,0.61734640922383,0,0,0,0,0.621377317606506,1.87620847984877,1.98068267607116,0.23674473558521,2.75469924446365,4.16521204795921,4.41814495025775,0.268273401399619,2.56883753207773,1.81015834904829,4.76085645829376,1.94565142910054,1.60819986167866,2.19550115291051,1.74468344388483,0,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,2.69645822596266,1.08069024937347,0.199141273254367,0,0,0,0.407302655690628,0,0.210407459670956,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,12.9391385874619,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0.32977250588296,0.968786560175433,0.482503399425247,1.07435109602823,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,1.08005340821801,1.04544148007234,2.40198820120795,0.539457385539283,0.165306911450672,0.523511883968059,1.16653475962614,1.24267862617385,0,0,0,0,0,0.506868376472335,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,1.1298205288131,0.25984164595559,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.609654453239999,0.201652370273681,0.194915761479505,0.384847366561318,0,1.13365191807606,0.221985953374065,0.269141569828427,1.00730769818447,0.19318959403219,0,0,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0.192906610981141,0.999242311751784,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr13:38284416..38284429,+ | |||
}} |
Revision as of 00:28, 13 September 2013
Short description: | p@chr13:38284416..38284429, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:38284416..38284429, + |
Coexpression cluster: | MCL_coexpression_mm9:373 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.13e-25 | 18 |
heart | 1.13e-25 | 18 |
primitive heart tube | 1.13e-25 | 18 |
primary heart field | 1.13e-25 | 18 |
anterior lateral plate mesoderm | 1.13e-25 | 18 |
heart tube | 1.13e-25 | 18 |
heart primordium | 1.13e-25 | 18 |
cardiac mesoderm | 1.13e-25 | 18 |
cardiogenic plate | 1.13e-25 | 18 |
heart rudiment | 1.13e-25 | 18 |
cardiovascular system | 1.38e-19 | 23 |
circulatory system | 1.38e-19 | 23 |
splanchnic layer of lateral plate mesoderm | 6.05e-13 | 33 |
compound organ | 4.46e-11 | 43 |
epithelial tube | 4.35e-10 | 47 |
mouth | 2.84e-07 | 2 |
oral opening | 2.84e-07 | 2 |
stomodeum | 2.84e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.