FFCP PHASE1:Mm9::chr13:73901128..73901211,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20499|HGNC=|UniProt=Q9WVL3,E9Q0L1,B9EIV8|association_with_transcript=0bp_to_ENSMUST00000017900,ENSMUST00000171201,NM_011390,uc007reb.1,uc007rec.1,uc007red.1_5end|description=CAGE_peak_1_at_Slc12a7_5end|id=chr13:73901128..73901211,+|ontology_enrichment_celltype=CL:0000066!8.18e-10!25;CL:0000223!1.28e-07!20;CL:0002076!1.74e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,8.18e-10,25;CL:0000223,1.28e-07,20;CL:0002076,1.74e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.41e-10!130;UBERON:0000925!1.41e-10!130;UBERON:0006595!1.41e-10!130;UBERON:0001007!2.67e-10!128;UBERON:0001555!2.67e-10!128;UBERON:0007026!2.67e-10!128;UBERON:0004921!1.29e-09!126;UBERON:0004185!1.29e-09!126;UBERON:0000344!1.60e-08!15;UBERON:0000160!7.04e-08!43;UBERON:0001242!9.84e-08!13;UBERON:0000060!9.84e-08!13;UBERON:0001262!9.84e-08!13;UBERON:0004786!9.84e-08!13;UBERON:0000485!2.51e-07!11;UBERON:0005409!4.86e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-14,31;UBERON:0004119,1.02e-13,118;UBERON:0000925,1.02e-13,118;UBERON:0006595,1.02e-13,118;UBERON:0001007,2.03e-13,116;UBERON:0001555,2.03e-13,116;UBERON:0007026,2.03e-13,116;UBERON:0004921,1.24e-12,114;UBERON:0005409,1.80e-11,47;UBERON:0000344,1.60e-08,15;UBERON:0001242,9.84e-08,13;UBERON:0001262,9.84e-08,13;UBERON:0004786,9.84e-08,13;UBERON:0000485,2.51e-07,11|phase1_expression=43.8807841067135,92.82745843207,72.7998783023258,176.336635191882,161.288425042724,54.0571255556285,49.5258798062514,20.2723617803275,7.03943610758334,9.59664557920173,4.79410311031414,10.0512920334124,11.8128503652532,14.7740480088106,15.6561588053361,8.50396123037269,4.89693314689703,7.72882305127682,8.77532375076728,9.33657233955666,22.6215151801846,9.92909512008853,9.66439219814061,46.0778177645011,43.8171726838295,49.3839489138917,43.0761996159075,43.9561314679214,48.265948541919,54.1864778983851,24.1686256614282,5.08024538767705,4.30545351309199,0,53.7264012737371,34.9092755252834,54.7173874783149,0.837063261473815,1.5626706890476,2.09409497589519,0.588231488031014,0.683045484958446,0.485510353031154,10.5753327099485,13.3817549209759,13.7660064121261,86.0630478782843,37.7183520538172,30.9757517655605,25.4703167787311,58.6543106610269,15.8127820801469,5.87239121202077,15.2326049822382,7.05796978199174,7.71778308107841,8.30946975822394,18.5641953219879,9.71119012126069,7.40587370980846,10.1413024560989,33.8844532069132,119.165502678893,43.6451362881479,39.554654502679,53.9964887359036,35.3528130411718,17.28982373947,17.6272340924412,18.6308194897733,18.2982716375702,3.71346279724945,6.40518768759679,15.4338407010842,19.2649396746655,16.5459381589804,1.10115880999389,2.42605942361857,1.0752457327937,10.2871304429551,8.14240028061446,9.89735404057844,2.51264699101243,1.68828783009504,4.27835093775068,3.24091444021034,4.27115042397309,4.10078780815661,4.24066682665831,9.82430281388212,57.1033042742305,24.0918685554788,7.47968467078526,26.445456390253,49.3830077260229,31.3618820968135,22.8924404814756,25.0532574189745,20.2633083590238,24.0270910667031,61.1260441830793,42.3477375467249,61.153257529595,78.2173373468664,33.339620315727,20.7755089689581,23.7596489156948,30.9438314038652,16.0541487861246,35.4776712364931,13.8788261412909,17.6589977421042,14.0675453326196,13.4143150091834,16.8151851204058,21.6146537087042,39.3039998697654,44.6812012882527,9.73071607144862,16.8237523945306,9.93786833071771,14.5462575940567,61.5092812019803,2.34224637609238,1.8850203613211,43.1722423302519,8.02761334189666,4.79922184794726,7.11593271609162,2.54644086988199,2.28750301409313,4.90051973240171,2.43354048269187,2.04572365864264,2.0778804455956,2.27137768294861,16.7016556714519,16.5461270911424,13.3943061969848,15.7831391914855,29.0168587806829,17.9323641458109,18.1862751103403,14.6183673300644,15.7844678031081,14.2206229516183,12.087522468205,12.6764651662118,37.7243987632474,38.1994281938995,27.8002776179039,15.5628970023578,21.1315909411454,10.7958171621872,6.99659263787008,34.4329281595993,1.40442637462647,4.37491442095016,5.11494298912067,40.5966514169584,38.4622738368998,43.9351429964876,48.0591813237977,52.5360498765568,52.7593526074834,67.6673779223687,62.2394291247117,50.5593932449844,63.6846619165169,36.4451770255591,23.9152988160274,28.2165975730891,32.7129671783665,20.1309628140558,2.73376933133365,7.51203670368776,67.7358505116786,51.3034099327276,29.6470668243975,27.8684006232526,30.2838534106919,40.1350214000452,38.6937796290074,46.9857296498021,57.8925455084304,35.9043721298344,48.2563600896517,40.1892073523125,47.7662013441844,64.714997423104,43.2276099749388,47.3956230345394,13.845756769575,25.2489212867501,27.0498565615393,25.8637186363549,27.9291581521381,26.5113399185404,40.6610933708974,57.2727374160856,56.9905382064191,57.3796812236372,39.4281994025908,14.5155241973002,16.5109555895091,16.6397963164792,20.8945925030158,27.0118418922707,25.9718368817048,24.7418678207697,23.023202202055,29.9271940375009,37.3797336971122,36.8419538191818,42.4371235435802,40.4126204715379,26.3714197877211,27.4992807177119,25.8654466233247,25.2023577654745,18.578007314391,16.1257831486429,15.9589368836181,21.4408009525524,15.7108802984769,17.5620283072019,20.3349335896986,23.0323277234726,17.5400245523236,24.5794972073607,28.6657069897387,31.388845712188,30.1582567878545,41.8807376540406,12.7858710984949,11.8652800911035,2.88991061978026,1.52375192569864,8.52461715958712,12.1186045058099,24.609641114468,25.3785183792815,24.7736907392719,28.9152245522588,28.7410289566288,29.4399592020386,24.6934528021686,18.704374906324,21.3455400091123,4.4984984299053,61.6019969803886,24.5730533060812,18.7320003256613,32.8290544715346,5.30980553359851,20.1507928008635,16.3254720760966,11.5049098651098,12.6979813938732,14.4494519533646,25.3259727304857,15.2684166380552,14.2598951353889,11.3773232856894,6.32511651449993,6.18813259489121,22.46901397975,33.4913634898237,32.8571056808196,30.2215219394545,29.793159251902,31.5712807155665,31.9225099968115,29.5331000641161,23.467170806371,33.2576351256198,13.6727606794076,6.43056386471772,10.0107944551461,8.38349656501366,9.90790455226033,8.86360858623331,65.0002265684567,3.15223013417866,8.88528580148834,16.9237231729842,12.5932278611404,7.34636982318295,8.47504211870356,8.92234875505438,16.6578861393978,15.3946597556024,16.1693969351176,48.6882015187708,30.8427593741607,19.3153493770506,21.6010681643603,18.3997700492732,25.9851450857951,31.0187996685088,40.0869260267879,95.2791628821868,40.8287165869148,22.3682152711293,2.25477175473676,46.3501292736334,54.1049263794709,49.3906018393881,43.9143399824286,40.8873823687683,34.6203854004974,33.3323225200512,29.0460384059219,9.18019659138823,5.47257011889944,35.393245510356,21.6915980360476,19.001527075493,27.9329769402259,32.0457785244792,24.2391252833143,28.7267124352726,25.1072196196781,30.1889685344961,27.5868640091099,27.3238961720838,26.6060014419524,31.0764248498264,43.3613307093621,13.6038230169127,28.1922160785062,23.95359971473,35.7594232855487,65.6844619709448,12.7624083306804,19.5972237965974,9.86094543763703,5.517293144389,3.3885110557024,0.460325236507177,2.29158205375759,2.06223818812425,2.74033007908257,2.2661816921691,0,0.900642406448441,2.26571204492102,2.5888015587591,17.4362743941417,31.5229649986815,25.0978400458577,15.3157231753025,9.85181864351517,13.9721066422011,18.0019849519308,16.4828045791115,22.1434254618353,19.4576853058124,17.7435509923168,18.1081287730633,19.4774335537355,17.5428917589342,17.1157697487728,20.4806287251722,20.1638727144049,18.1334667235883,17.7196937345422,20.6078488188156,17.8292011240416,20.7646693206425,15.7367885365232,18.1683020790411,17.1279072355902,18.3613699124938,17.0123014771678,19.9932980692761,18.6051635968831,23.567975409625,15.8970924286393,19.0113650984837,22.9169384175026,17.3529262128282,15.4325288784913,14.2392029424629,25.0306821036587,15.4707158914775,16.0682198937828,14.559033661888,12.9845987947436|short_description=p1@Slc12a7}} | ||
|EntrezGene=20499 | |||
|HGNC= | |||
|UniProt=Q9WVL3,E9Q0L1,B9EIV8 | |||
|association_with_transcript=0bp_to_ENSMUST00000017900,ENSMUST00000171201,NM_011390,uc007reb.1,uc007rec.1,uc007red.1_5end | |||
|description=CAGE_peak_1_at_Slc12a7_5end | |||
|id=chr13:73901128..73901211,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.18e-10!25;CL:0000223!1.28e-07!20;CL:0002076!1.74e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.18e-10,25;CL:0000223,1.28e-07,20;CL:0002076,1.74e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.41e-10!130;UBERON:0000925!1.41e-10!130;UBERON:0006595!1.41e-10!130;UBERON:0001007!2.67e-10!128;UBERON:0001555!2.67e-10!128;UBERON:0007026!2.67e-10!128;UBERON:0004921!1.29e-09!126;UBERON:0004185!1.29e-09!126;UBERON:0000344!1.60e-08!15;UBERON:0000160!7.04e-08!43;UBERON:0001242!9.84e-08!13;UBERON:0000060!9.84e-08!13;UBERON:0001262!9.84e-08!13;UBERON:0004786!9.84e-08!13;UBERON:0000485!2.51e-07!11;UBERON:0005409!4.86e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-14,31;UBERON:0004119,1.02e-13,118;UBERON:0000925,1.02e-13,118;UBERON:0006595,1.02e-13,118;UBERON:0001007,2.03e-13,116;UBERON:0001555,2.03e-13,116;UBERON:0007026,2.03e-13,116;UBERON:0004921,1.24e-12,114;UBERON:0005409,1.80e-11,47;UBERON:0000344,1.60e-08,15;UBERON:0001242,9.84e-08,13;UBERON:0001262,9.84e-08,13;UBERON:0004786,9.84e-08,13;UBERON:0000485,2.51e-07,11 | |||
|phase1_expression=43.8807841067135,92.82745843207,72.7998783023258,176.336635191882,161.288425042724,54.0571255556285,49.5258798062514,20.2723617803275,7.03943610758334,9.59664557920173,4.79410311031414,10.0512920334124,11.8128503652532,14.7740480088106,15.6561588053361,8.50396123037269,4.89693314689703,7.72882305127682,8.77532375076728,9.33657233955666,22.6215151801846,9.92909512008853,9.66439219814061,46.0778177645011,43.8171726838295,49.3839489138917,43.0761996159075,43.9561314679214,48.265948541919,54.1864778983851,24.1686256614282,5.08024538767705,4.30545351309199,0,53.7264012737371,34.9092755252834,54.7173874783149,0.837063261473815,1.5626706890476,2.09409497589519,0.588231488031014,0.683045484958446,0.485510353031154,10.5753327099485,13.3817549209759,13.7660064121261,86.0630478782843,37.7183520538172,30.9757517655605,25.4703167787311,58.6543106610269,15.8127820801469,5.87239121202077,15.2326049822382,7.05796978199174,7.71778308107841,8.30946975822394,18.5641953219879,9.71119012126069,7.40587370980846,10.1413024560989,33.8844532069132,119.165502678893,43.6451362881479,39.554654502679,53.9964887359036,35.3528130411718,17.28982373947,17.6272340924412,18.6308194897733,18.2982716375702,3.71346279724945,6.40518768759679,15.4338407010842,19.2649396746655,16.5459381589804,1.10115880999389,2.42605942361857,1.0752457327937,10.2871304429551,8.14240028061446,9.89735404057844,2.51264699101243,1.68828783009504,4.27835093775068,3.24091444021034,4.27115042397309,4.10078780815661,4.24066682665831,9.82430281388212,57.1033042742305,24.0918685554788,7.47968467078526,26.445456390253,49.3830077260229,31.3618820968135,22.8924404814756,25.0532574189745,20.2633083590238,24.0270910667031,61.1260441830793,42.3477375467249,61.153257529595,78.2173373468664,33.339620315727,20.7755089689581,23.7596489156948,30.9438314038652,16.0541487861246,35.4776712364931,13.8788261412909,17.6589977421042,14.0675453326196,13.4143150091834,16.8151851204058,21.6146537087042,39.3039998697654,44.6812012882527,9.73071607144862,16.8237523945306,9.93786833071771,14.5462575940567,61.5092812019803,2.34224637609238,1.8850203613211,43.1722423302519,8.02761334189666,4.79922184794726,7.11593271609162,2.54644086988199,2.28750301409313,4.90051973240171,2.43354048269187,2.04572365864264,2.0778804455956,2.27137768294861,16.7016556714519,16.5461270911424,13.3943061969848,15.7831391914855,29.0168587806829,17.9323641458109,18.1862751103403,14.6183673300644,15.7844678031081,14.2206229516183,12.087522468205,12.6764651662118,37.7243987632474,38.1994281938995,27.8002776179039,15.5628970023578,21.1315909411454,10.7958171621872,6.99659263787008,34.4329281595993,1.40442637462647,4.37491442095016,5.11494298912067,40.5966514169584,38.4622738368998,43.9351429964876,48.0591813237977,52.5360498765568,52.7593526074834,67.6673779223687,62.2394291247117,50.5593932449844,63.6846619165169,36.4451770255591,23.9152988160274,28.2165975730891,32.7129671783665,20.1309628140558,2.73376933133365,7.51203670368776,67.7358505116786,51.3034099327276,29.6470668243975,27.8684006232526,30.2838534106919,40.1350214000452,38.6937796290074,46.9857296498021,57.8925455084304,35.9043721298344,48.2563600896517,40.1892073523125,47.7662013441844,64.714997423104,43.2276099749388,47.3956230345394,13.845756769575,25.2489212867501,27.0498565615393,25.8637186363549,27.9291581521381,26.5113399185404,40.6610933708974,57.2727374160856,56.9905382064191,57.3796812236372,39.4281994025908,14.5155241973002,16.5109555895091,16.6397963164792,20.8945925030158,27.0118418922707,25.9718368817048,24.7418678207697,23.023202202055,29.9271940375009,37.3797336971122,36.8419538191818,42.4371235435802,40.4126204715379,26.3714197877211,27.4992807177119,25.8654466233247,25.2023577654745,18.578007314391,16.1257831486429,15.9589368836181,21.4408009525524,15.7108802984769,17.5620283072019,20.3349335896986,23.0323277234726,17.5400245523236,24.5794972073607,28.6657069897387,31.388845712188,30.1582567878545,41.8807376540406,12.7858710984949,11.8652800911035,2.88991061978026,1.52375192569864,8.52461715958712,12.1186045058099,24.609641114468,25.3785183792815,24.7736907392719,28.9152245522588,28.7410289566288,29.4399592020386,24.6934528021686,18.704374906324,21.3455400091123,4.4984984299053,61.6019969803886,24.5730533060812,18.7320003256613,32.8290544715346,5.30980553359851,20.1507928008635,16.3254720760966,11.5049098651098,12.6979813938732,14.4494519533646,25.3259727304857,15.2684166380552,14.2598951353889,11.3773232856894,6.32511651449993,6.18813259489121,22.46901397975,33.4913634898237,32.8571056808196,30.2215219394545,29.793159251902,31.5712807155665,31.9225099968115,29.5331000641161,23.467170806371,33.2576351256198,13.6727606794076,6.43056386471772,10.0107944551461,8.38349656501366,9.90790455226033,8.86360858623331,65.0002265684567,3.15223013417866,8.88528580148834,16.9237231729842,12.5932278611404,7.34636982318295,8.47504211870356,8.92234875505438,16.6578861393978,15.3946597556024,16.1693969351176,48.6882015187708,30.8427593741607,19.3153493770506,21.6010681643603,18.3997700492732,25.9851450857951,31.0187996685088,40.0869260267879,95.2791628821868,40.8287165869148,22.3682152711293,2.25477175473676,46.3501292736334,54.1049263794709,49.3906018393881,43.9143399824286,40.8873823687683,34.6203854004974,33.3323225200512,29.0460384059219,9.18019659138823,5.47257011889944,35.393245510356,21.6915980360476,19.001527075493,27.9329769402259,32.0457785244792,24.2391252833143,28.7267124352726,25.1072196196781,30.1889685344961,27.5868640091099,27.3238961720838,26.6060014419524,31.0764248498264,43.3613307093621,13.6038230169127,28.1922160785062,23.95359971473,35.7594232855487,65.6844619709448,12.7624083306804,19.5972237965974,9.86094543763703,5.517293144389,3.3885110557024,0.460325236507177,2.29158205375759,2.06223818812425,2.74033007908257,2.2661816921691,0,0.900642406448441,2.26571204492102,2.5888015587591,17.4362743941417,31.5229649986815,25.0978400458577,15.3157231753025,9.85181864351517,13.9721066422011,18.0019849519308,16.4828045791115,22.1434254618353,19.4576853058124,17.7435509923168,18.1081287730633,19.4774335537355,17.5428917589342,17.1157697487728,20.4806287251722,20.1638727144049,18.1334667235883,17.7196937345422,20.6078488188156,17.8292011240416,20.7646693206425,15.7367885365232,18.1683020790411,17.1279072355902,18.3613699124938,17.0123014771678,19.9932980692761,18.6051635968831,23.567975409625,15.8970924286393,19.0113650984837,22.9169384175026,17.3529262128282,15.4325288784913,14.2392029424629,25.0306821036587,15.4707158914775,16.0682198937828,14.559033661888,12.9845987947436 | |||
|short_description=p1@Slc12a7 | |||
}} |
Revision as of 01:05, 13 September 2013
Short description: | p1@Slc12a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc12a7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000017900, ENSMUST00000171201, NM_011390, uc007reb.1, uc007rec.1, uc007red.1_5end |
EntrezGene: | Slc12a7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.18e-10 | 25 |
endodermal cell | 1.28e-07 | 20 |
endo-epithelial cell | 1.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-14 | 31 |
endoderm-derived structure | 1.02e-13 | 118 |
endoderm | 1.02e-13 | 118 |
presumptive endoderm | 1.02e-13 | 118 |
digestive system | 2.03e-13 | 116 |
digestive tract | 2.03e-13 | 116 |
primitive gut | 2.03e-13 | 116 |
subdivision of digestive tract | 1.24e-12 | 114 |
gastrointestinal system | 1.80e-11 | 47 |
mucosa | 1.60e-08 | 15 |
intestinal mucosa | 9.84e-08 | 13 |
wall of intestine | 9.84e-08 | 13 |
gastrointestinal system mucosa | 9.84e-08 | 13 |
simple columnar epithelium | 2.51e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.