FFCP PHASE1:Hg19::chr3:99979759..99979770,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55773|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25622|TSSclassifier=S|UniProt=C9JAM5,Q9NUY8|association_with_transcript=-73bp_to_,73bp_to_ENST00000485687,NM_001199198,NM_018309,uc003dts.2,uc003dtt.2_5end|description=CAGE_peak_2_at_TBC1D23_5end|id=chr3:99979759..99979770,+|ontology_enrichment_celltype=CL:0000034!9.57e-09!444;CL:0000048!3.83e-08!430;CL:0000723!7.59e-08!436;CL:0000057!5.93e-07!75;CL:0000055!6.20e-07!180|ontology_enrichment_celltype_v019=CL:0000764;1.39e-07;2!CL:0000558;1.39e-07;2|ontology_enrichment_celltype_v019_2=CL:0000048,8.26e-10,427;CL:0000034,1.04e-09,441;CL:0000723,1.72e-09,433;CL:0000764,1.15e-07,2;CL:0000765,1.15e-07,2;CL:0000050,1.15e-07,2;CL:0000038,1.15e-07,2;CL:0000558,1.15e-07,2;CL:0000547,1.15e-07,2;CL:0000549,1.15e-07,2;CL:0000550,1.15e-07,2;CL:0000552,1.15e-07,2;CL:0000134,4.77e-07,354|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.2717486548939,0,0.845726424575827,1.0007329835313,0,0,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0,0,0,1.46062018077475,0,0,0,0.626909442956176,0.286235987131057,0.547497700291537,0.125542639594803,0.152826811495903,0.246301768349837,0.236132343941038,0.393364276848904,0,0.464448369948228,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0,0,0,0,0.726991193897824,0,0.727752183563449,1.16214518452842,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,1.41889337933151,1.72372840368309,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,1.53041946185451,0.962787081228281,1.27867425159808,0.989553900560148,0.199463657621632,0.426224750532694,2.61188314765726,0.56738522469114,0.622822248995575,1.7587406567972,1.5644487552606,0.868755378820466,0,0,0.949387162322653,0,0,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,1.50401373190767,0,0,0.486634870302636,0.661743720148475,0.221729397462564,0.614843499851882,0.130979075497713,0,0,0,0.522389211897802,0,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0.66944122552934,0,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,1.39293562831038,2.25095607382472,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.404132016209064,0.163461903113459,0,0,0.468642863667593,0.936480230490962,0,2.54062756938062,0.469737994575059,0.161872944368132,0.421352420106746,1.22492502752936,0.245668634623536,0.206651562351531,2.37600571456411,0,0,0,0.841680569770331,0.500474079487857,0.554128230968366,0,0.30648779579902,0,0.340296549480063,0.89694817844431,0.85422955527427,0.635795703478686,0.900273288253207,1.03052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.194874010322397,1.51460264546469,0.460249493211497,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0.530119073285941,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0.928735856063958,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.737930631258681,0.514703430895577,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.579652024875384,0.352226082707465,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0.503946384596579,0.283550194484773,0.268675568108545,0.290633938513962,0,9.36060152002293,0.176096868026452,0.207328115540772,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0.22001485746285,1.68053230485111,0,0,0.797814349754612,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0.112085143993527,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,2.24702107184155,0,0.414415513436035,0.36807447515742,0,0.542530047399471,0.415941723061614,0.535286966391485,0,0.585707074963566,0.300946099727719,0,0,0,0,1.39013783148933,0,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0.920771839728375,0.280660094433074,1.28139149255701,0.511707249066704,0.64341568457443,0,0.925258162815933,1.420493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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25622 | |||
|TSSclassifier=S | |||
|UniProt=C9JAM5,Q9NUY8 | |||
|association_with_transcript=-73bp_to_,73bp_to_ENST00000485687,NM_001199198,NM_018309,uc003dts.2,uc003dtt.2_5end | |||
|description=CAGE_peak_2_at_TBC1D23_5end | |||
|id=chr3:99979759..99979770,+ | |||
|ontology_enrichment_celltype=CL:0000034!9.57e-09!444;CL:0000048!3.83e-08!430;CL:0000723!7.59e-08!436;CL:0000057!5.93e-07!75;CL:0000055!6.20e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.39e-07;2!CL:0000558;1.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.26e-10,427;CL:0000034,1.04e-09,441;CL:0000723,1.72e-09,433;CL:0000764,1.15e-07,2;CL:0000765,1.15e-07,2;CL:0000050,1.15e-07,2;CL:0000038,1.15e-07,2;CL:0000558,1.15e-07,2;CL:0000547,1.15e-07,2;CL:0000549,1.15e-07,2;CL:0000550,1.15e-07,2;CL:0000552,1.15e-07,2;CL:0000134,4.77e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@TBC1D23 | |||
}} |
Revision as of 01:44, 13 September 2013
Short description: | p2@TBC1D23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TBC1D23_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_, 73bp_to_ENST00000485687, NM_001199198, NM_018309, uc003dts.2, uc003dtt.2_5end |
EntrezGene: | TBC1D23 |
HGNC: | 25622 |
UniProt: | C9JAM5Q9NUY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.26e-10 | 427 |
stem cell | 1.04e-09 | 441 |
somatic stem cell | 1.72e-09 | 433 |
erythroid lineage cell | 1.15e-07 | 2 |
erythroblast | 1.15e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.15e-07 | 2 |
erythroid progenitor cell | 1.15e-07 | 2 |
reticulocyte | 1.15e-07 | 2 |
proerythroblast | 1.15e-07 | 2 |
basophilic erythroblast | 1.15e-07 | 2 |
polychromatophilic erythroblast | 1.15e-07 | 2 |
orthochromatic erythroblast | 1.15e-07 | 2 |
mesenchymal cell | 4.77e-07 | 354 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.