FFCP PHASE1:Hg19::chr4:119948404..119948418,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=171024|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=17732|TSSclassifier=S|UniProt=Q9UMS6|association_with_transcript=81bp_to_AJ010482_5end|coexpression_cluster_id=C669|description=CAGE_peak_4_at_SYNPO2_5end|id=chr4:119948404..119948418,+|ontology_enrichment_celltype=CL:0000136!2.08e-08!15|ontology_enrichment_celltype_v019=CL:0000136;1.64e-09;13!CL:0002620;6.97e-07;23|ontology_enrichment_celltype_v019_2=CL:0000136,8.18e-08,15;CL:0002620,7.30e-07,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.66e-22!115;UBERON:0000468!1.72e-07!659;UBERON:0000062!2.70e-07!511;UBERON:0003102!9.13e-07!95|ontology_enrichment_uberon_v019=UBERON:0003688;8.40e-08;6!UBERON:0002358;8.40e-08;6!UBERON:0003684;8.40e-08;6!UBERON:0001178;8.40e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.88e-13,114;UBERON:0003688,8.19e-08,6;UBERON:0002358,8.19e-08,6;UBERON:0003684,8.19e-08,6;UBERON:0001178,8.19e-08,6|phase1_expression=8.53888382571616,9.20632252731228,22.4117502512594,19.0139266870948,22.7950158157917,9.59572376510406,10.1319951267324,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,1.85943229524548,2.05583944010913,3.71647645074124,0.28769239232215,1.2808035326455,1.89185783910868,13.4450815487281,21.9464792418501,8.12558919566051,0,0.272906150057846,0.898893937780338,4.59125838556354,13.4790191371959,14.7047538933779,0,0.199463657621632,0,17.1223450790865,39.7169657283798,56.6768246585973,0,0.521482918420201,0,12.7133895553007,67.0265297497368,76.9003601481349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,5.50112117090393,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.93943903390637,0.633152558322899,6.75286822147416,0,0,1.12135520028461,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.408308342509787,0,0,7.12801714369232,7.41800787835671,0,0,0,0.250237039743928,0.831192346452549,6.58466431321257,7.66219489497549,5.10809400282429,0,3.04962380671065,10.8914268297469,6.99375273826554,2.40072876867522,8.96557004374418,11.3361837620077,10.422543954569,2.70042131586026,2.04617710838517,5.80597680761463,7.73219148595314,1.2931684545505,4.9701342952326,9.06768884048762,2.20428770003634,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0.468008530278475,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.432359860250884,0,0.063497894292169,0,0,0,0,0,0,0,0,0,8.01484637698222,0,0,26.8597497750719,13.5209667984776,0,0,0,1.57275793023962,0,0,0,1.06617584622764,0,0.301439377059586,3.48613383440118,0.199945982364114,0,0,0,0,0,0,2.17171960001369,1.02738161275192,3.76028022803781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0224556611328,6.0665856191035,3.31175071571263,12.2998485742349,0.300946099727719,0,1.03473071292505,1.32845119707087,0.184369168541703,0.434418072340414,0,0.686286847621712,0,0,0,0,0,0,4.96215615637554,22.098524153481,3.64858122762996,9.22601874641047,29.1673131968021,10.9380666377653,2.96836132889982,0.154209693802656,0.532685175939381,0.164254312027618,0,0.232420756919918,0,0,0,0.229628896329213,0.546273504020151,4.19598127870157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29731237272711,1.83138929636687,3.38288949674411,0,0,1.6068392984416,2.51343867559517,0.616194468458578,0.614014698904518,1.24052915236078,0.107420244868274,0.435050081742686,1.78975917573812,8.63610745773352,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,1.58189712359363,2.2875623270859,0,0,0,0,1.07923474549989,0,0,0.606547444719948,1.58510321173008,0,0.48763373908959,1.21856744815642,1.05650146756755,2.72999822815972,0.282810863907425,0,0,0,1.75380354101505,0,0,2.43492452355245,0.30982349809975,0.563391205064483,0.286822704408103,1.8667317792493,2.85336841185,0,0.422215270595328,1.31717957183961,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.4481440336507,0,0,0,0,0,0,0,0.281338832821026,0,0,0,14.1466071658259,59.1247579236656,0,0,0,21.7727711363265,0,0,0,254.697273354563,0,0,0,0.74214478529481,0,0,0,8.69999490521752,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,3.29078095730959,0,0,34.2428650341897,0,0,0,0,0,10.3505280544104,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8578579323551,46.2633062352464,36.0507785510839,0,0,0,0.741412462787447,43.3391929541346,0.234264445725339,0,0,0,52.8743099818183,13.308978765353,0,20.1565189014877,0,0,0,0,0,0,0,0,0,0,0,25.5100935633364,0,0,0,0,191.45631854814,0,12.6549214837098,0,0,0.50648636764703,0,0,55.070872642753,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=171024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17732 | |||
|TSSclassifier=S | |||
|UniProt=Q9UMS6 | |||
|association_with_transcript=81bp_to_AJ010482_5end | |||
|coexpression_cluster_id=C669 | |||
|description=CAGE_peak_4_at_SYNPO2_5end | |||
|id=chr4:119948404..119948418,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.08e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.64e-09;13!CL:0002620;6.97e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.18e-08,15;CL:0002620,7.30e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.66e-22!115;UBERON:0000468!1.72e-07!659;UBERON:0000062!2.70e-07!511;UBERON:0003102!9.13e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.40e-08;6!UBERON:0002358;8.40e-08;6!UBERON:0003684;8.40e-08;6!UBERON:0001178;8.40e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.88e-13,114;UBERON:0003688,8.19e-08,6;UBERON:0002358,8.19e-08,6;UBERON:0003684,8.19e-08,6;UBERON:0001178,8.19e-08,6 | |||
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| |||
|short_description=p4@SYNPO2 | |||
}} |
Revision as of 02:12, 13 September 2013
Short description: | p4@SYNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SYNPO2_5end |
Coexpression cluster: | C669_skeletal_smooth_bladder_esophagus_prostate_penis_ductus |
Association with transcript: | 81bp_to_AJ010482_5end |
EntrezGene: | SYNPO2 |
HGNC: | 17732 |
UniProt: | Q9UMS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.18e-08 | 15 |
skin fibroblast | 7.30e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.88e-13 | 114 |
omentum | 8.19e-08 | 6 |
peritoneum | 8.19e-08 | 6 |
abdominal cavity | 8.19e-08 | 6 |
visceral peritoneum | 8.19e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.