FFCP PHASE1:Hg19::chr4:2420240..2420251,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57732|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29334|TSSclassifier=S|UniProt=E9PG77|association_with_transcript=84bp_to_ENST00000503000_5end|coexpression_cluster_id=C11|description=CAGE_peak_7_at_ZFYVE28_5end|id=chr4:2420240..2420251,-|ontology_enrichment_celltype=CL:0000738!1.47e-08!140;CL:0000080!9.56e-08!6;CL:0002087!1.54e-07!119;CL:0002031!2.42e-07!124;CL:0000623!8.17e-07!3;CL:0000825!8.17e-07!3|ontology_enrichment_celltype_v019=CL:0000623;3.56e-27;3!CL:0000791;1.61e-10;18!CL:0000789;1.61e-10;18!CL:0002419;1.61e-10;18!CL:0000625;3.89e-08;11!CL:0000767;6.78e-08;3!CL:0000084;9.68e-08;25|ontology_enrichment_celltype_v019_2=CL:0000623,2.72e-27,3;CL:0000825,2.72e-27,3;CL:0000791,1.78e-10,18;CL:0000789,1.78e-10,18;CL:0002420,1.78e-10,18;CL:0002419,1.78e-10,18;CL:0000790,1.78e-10,18;CL:0000838,1.32e-09,52;CL:0000542,2.00e-09,53;CL:0000051,2.00e-09,53;CL:0000625,3.90e-08,11;CL:0000767,5.54e-08,3;CL:0000084,1.04e-07,25;CL:0000827,1.04e-07,25;CL:0000738,8.60e-07,136|ontology_enrichment_development_v019=UBERON:0006215;1.32e-60;3!CL:0000790;1.61e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.43e-22!57;UBERON:0005068!2.43e-22!57;UBERON:0006241!2.43e-22!57;UBERON:0007135!2.43e-22!57;UBERON:0002616!2.23e-21!59;UBERON:0000955!1.33e-20!69;UBERON:0006238!1.33e-20!69;UBERON:0001017!3.56e-19!82;UBERON:0005743!4.92e-19!86;UBERON:0000073!2.60e-18!94;UBERON:0001016!2.60e-18!94;UBERON:0002780!6.37e-16!41;UBERON:0001890!6.37e-16!41;UBERON:0006240!6.37e-16!41;UBERON:0003080!2.16e-15!42;UBERON:0007023!9.83e-14!115;UBERON:0003075!1.33e-13!86;UBERON:0007284!1.33e-13!86;UBERON:0002020!1.85e-13!34;UBERON:0003528!1.85e-13!34;UBERON:0001893!1.98e-13!34;UBERON:0002346!1.40e-12!90;UBERON:0002791!3.04e-12!33;UBERON:0001950!7.99e-12!20;UBERON:0001869!1.02e-11!32;UBERON:0002619!1.73e-10!22;UBERON:0003056!1.08e-09!61;UBERON:0000033!1.40e-09!123;UBERON:0000153!1.90e-09!129;UBERON:0007811!1.90e-09!129;UBERON:0000956!7.02e-09!25;UBERON:0000203!7.02e-09!25;UBERON:0004733!8.79e-09!12;UBERON:0002028!8.79e-09!12;UBERON:0007277!8.79e-09!12;UBERON:0003076!2.73e-08!15;UBERON:0003057!2.73e-08!15;UBERON:0004732!5.67e-08!13;UBERON:0000200!8.78e-08!6;UBERON:0002680!3.10e-07!9;UBERON:0001895!3.10e-07!9;UBERON:0010092!3.10e-07!9;UBERON:0002298!4.40e-07!8|ontology_enrichment_uberon_v019=UBERON:0002037;9.20e-31;6!UBERON:0002680;8.88e-21;9!UBERON:0001895;8.88e-21;9!UBERON:0004733;9.09e-16;12!UBERON:0002028;9.09e-16;12!UBERON:0004732;1.31e-14;13|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.21e-31,6;UBERON:0006215,9.21e-31,6;UBERON:0002680,8.88e-21,9;UBERON:0001895,8.88e-21,9;UBERON:0010092,8.88e-21,9;UBERON:0004733,9.09e-16,12;UBERON:0002028,9.09e-16,12;UBERON:0007277,9.09e-16,12;UBERON:0004732,1.31e-14,13;UBERON:0003076,9.45e-13,15;UBERON:0003057,9.45e-13,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.797854630486527,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,1.02800749499755,0.167186495390678,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.20964045934839,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.560425719967636,1.37921532141349,0.431255149719035,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.413536052245775,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57732 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29334 | |||
|TSSclassifier=S | |||
|UniProt=E9PG77 | |||
|association_with_transcript=84bp_to_ENST00000503000_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_ZFYVE28_5end | |||
|id=chr4:2420240..2420251,- | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-08!140;CL:0000080!9.56e-08!6;CL:0002087!1.54e-07!119;CL:0002031!2.42e-07!124;CL:0000623!8.17e-07!3;CL:0000825!8.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.56e-27;3!CL:0000791;1.61e-10;18!CL:0000789;1.61e-10;18!CL:0002419;1.61e-10;18!CL:0000625;3.89e-08;11!CL:0000767;6.78e-08;3!CL:0000084;9.68e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.72e-27,3;CL:0000825,2.72e-27,3;CL:0000791,1.78e-10,18;CL:0000789,1.78e-10,18;CL:0002420,1.78e-10,18;CL:0002419,1.78e-10,18;CL:0000790,1.78e-10,18;CL:0000838,1.32e-09,52;CL:0000542,2.00e-09,53;CL:0000051,2.00e-09,53;CL:0000625,3.90e-08,11;CL:0000767,5.54e-08,3;CL:0000084,1.04e-07,25;CL:0000827,1.04e-07,25;CL:0000738,8.60e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.32e-60;3!CL:0000790;1.61e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-22!57;UBERON:0005068!2.43e-22!57;UBERON:0006241!2.43e-22!57;UBERON:0007135!2.43e-22!57;UBERON:0002616!2.23e-21!59;UBERON:0000955!1.33e-20!69;UBERON:0006238!1.33e-20!69;UBERON:0001017!3.56e-19!82;UBERON:0005743!4.92e-19!86;UBERON:0000073!2.60e-18!94;UBERON:0001016!2.60e-18!94;UBERON:0002780!6.37e-16!41;UBERON:0001890!6.37e-16!41;UBERON:0006240!6.37e-16!41;UBERON:0003080!2.16e-15!42;UBERON:0007023!9.83e-14!115;UBERON:0003075!1.33e-13!86;UBERON:0007284!1.33e-13!86;UBERON:0002020!1.85e-13!34;UBERON:0003528!1.85e-13!34;UBERON:0001893!1.98e-13!34;UBERON:0002346!1.40e-12!90;UBERON:0002791!3.04e-12!33;UBERON:0001950!7.99e-12!20;UBERON:0001869!1.02e-11!32;UBERON:0002619!1.73e-10!22;UBERON:0003056!1.08e-09!61;UBERON:0000033!1.40e-09!123;UBERON:0000153!1.90e-09!129;UBERON:0007811!1.90e-09!129;UBERON:0000956!7.02e-09!25;UBERON:0000203!7.02e-09!25;UBERON:0004733!8.79e-09!12;UBERON:0002028!8.79e-09!12;UBERON:0007277!8.79e-09!12;UBERON:0003076!2.73e-08!15;UBERON:0003057!2.73e-08!15;UBERON:0004732!5.67e-08!13;UBERON:0000200!8.78e-08!6;UBERON:0002680!3.10e-07!9;UBERON:0001895!3.10e-07!9;UBERON:0010092!3.10e-07!9;UBERON:0002298!4.40e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.20e-31;6!UBERON:0002680;8.88e-21;9!UBERON:0001895;8.88e-21;9!UBERON:0004733;9.09e-16;12!UBERON:0002028;9.09e-16;12!UBERON:0004732;1.31e-14;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.21e-31,6;UBERON:0006215,9.21e-31,6;UBERON:0002680,8.88e-21,9;UBERON:0001895,8.88e-21,9;UBERON:0010092,8.88e-21,9;UBERON:0004733,9.09e-16,12;UBERON:0002028,9.09e-16,12;UBERON:0007277,9.09e-16,12;UBERON:0004732,1.31e-14,13;UBERON:0003076,9.45e-13,15;UBERON:0003057,9.45e-13,15 | |||
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|short_description=p7@ZFYVE28 | |||
}} |
Revision as of 10:33, 13 September 2013
Short description: | p7@ZFYVE28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ZFYVE28_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 84bp_to_ENST00000503000_5end |
EntrezGene: | ZFYVE28 |
HGNC: | 29334 |
UniProt: | E9PG77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.72e-27 | 3 |
pro-NK cell | 2.72e-27 | 3 |
mature alpha-beta T cell | 1.78e-10 | 18 |
alpha-beta T cell | 1.78e-10 | 18 |
immature T cell | 1.78e-10 | 18 |
mature T cell | 1.78e-10 | 18 |
immature alpha-beta T cell | 1.78e-10 | 18 |
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
lymphocyte | 2.00e-09 | 53 |
common lymphoid progenitor | 2.00e-09 | 53 |
CD8-positive, alpha-beta T cell | 3.90e-08 | 11 |
basophil | 5.54e-08 | 3 |
T cell | 1.04e-07 | 25 |
pro-T cell | 1.04e-07 | 25 |
leukocyte | 8.60e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.21e-31 | 6 |
rhombic lip | 9.21e-31 | 6 |
regional part of metencephalon | 8.88e-21 | 9 |
metencephalon | 8.88e-21 | 9 |
future metencephalon | 8.88e-21 | 9 |
segmental subdivision of hindbrain | 9.09e-16 | 12 |
hindbrain | 9.09e-16 | 12 |
presumptive hindbrain | 9.09e-16 | 12 |
segmental subdivision of nervous system | 1.31e-14 | 13 |
posterior neural tube | 9.45e-13 | 15 |
chordal neural plate | 9.45e-13 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.