FFCP PHASE1:Mm9::chr16:48310540..48310579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=73703|HGNC=|MCL_coexpression_id=97|UniProt=Q9CWH0|association_with_transcript=-10bp_to_ENSMUST00000097175_5end|description=CAGE_peak_1_at_Dppa2_5end|id=chr16:48310540..48310579,+|ontology_enrichment_celltype=CL:0000349!5.74e-10!3;CL:0000351!5.74e-10!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!9.25e-17!24;UBERON:0005156!2.98e-15!26;UBERON:0000990!2.98e-15!26;UBERON:0000991!2.37e-13!18;UBERON:0005564!2.37e-13!18;UBERON:0004176!2.27e-11!17;UBERON:0009196!2.27e-11!17;UBERON:0009117!2.27e-11!17;UBERON:0000473!2.59e-11!14;UBERON:0003135!1.80e-10!15;UBERON:0000358!5.74e-10!3;UBERON:0000307!5.74e-10!3;UBERON:0003101!9.85e-10!16;UBERON:0000079!9.85e-10!16;UBERON:0005631!2.37e-09!3;UBERON:0000478!2.37e-09!3;UBERON:0000158!2.37e-09!3;UBERON:0001987!8.69e-07!2;UBERON:0003124!8.69e-07!2;UBERON:0004340!8.69e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003133,1.10e-08,24;UBERON:0005156,4.75e-08,26;UBERON:0000990,4.75e-08,26;UBERON:0001987,1.76e-07,2;UBERON:0003124,1.76e-07,2;UBERON:0004340,1.76e-07,2;UBERON:0000991,7.90e-07,18;UBERON:0005564,7.90e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,2.8408143748356,1.32366792365678,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4290869693142,3.22969883794113,12.5913462273059,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Dppa2}} | ||
|EntrezGene=73703 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=Q9CWH0 | |||
|association_with_transcript=-10bp_to_ENSMUST00000097175_5end | |||
|description=CAGE_peak_1_at_Dppa2_5end | |||
|id=chr16:48310540..48310579,+ | |||
|ontology_enrichment_celltype=CL:0000349!5.74e-10!3;CL:0000351!5.74e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!9.25e-17!24;UBERON:0005156!2.98e-15!26;UBERON:0000990!2.98e-15!26;UBERON:0000991!2.37e-13!18;UBERON:0005564!2.37e-13!18;UBERON:0004176!2.27e-11!17;UBERON:0009196!2.27e-11!17;UBERON:0009117!2.27e-11!17;UBERON:0000473!2.59e-11!14;UBERON:0003135!1.80e-10!15;UBERON:0000358!5.74e-10!3;UBERON:0000307!5.74e-10!3;UBERON:0003101!9.85e-10!16;UBERON:0000079!9.85e-10!16;UBERON:0005631!2.37e-09!3;UBERON:0000478!2.37e-09!3;UBERON:0000158!2.37e-09!3;UBERON:0001987!8.69e-07!2;UBERON:0003124!8.69e-07!2;UBERON:0004340!8.69e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003133,1.10e-08,24;UBERON:0005156,4.75e-08,26;UBERON:0000990,4.75e-08,26;UBERON:0001987,1.76e-07,2;UBERON:0003124,1.76e-07,2;UBERON:0004340,1.76e-07,2;UBERON:0000991,7.90e-07,18;UBERON:0005564,7.90e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,2.8408143748356,1.32366792365678,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4290869693142,3.22969883794113,12.5913462273059,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Dppa2 | |||
}} |
Revision as of 12:48, 13 September 2013
Short description: | p1@Dppa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dppa2_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -10bp_to_ENSMUST00000097175_5end |
EntrezGene: | Dppa2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.17e-38 | 3 |
trophoblast cell | 1.17e-38 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.17e-38 | 3 |
blastula | 1.17e-38 | 3 |
cleaving embryo | 1.17e-38 | 3 |
reproductive organ | 1.10e-08 | 24 |
reproductive structure | 4.75e-08 | 26 |
reproductive system | 4.75e-08 | 26 |
placenta | 1.76e-07 | 2 |
chorion | 1.76e-07 | 2 |
allantois | 1.76e-07 | 2 |
gonad | 7.90e-07 | 18 |
gonad primordium | 7.90e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.