FFCP PHASE1:Mm9::chr17:24857047..24857063,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16898,544872,639606,667847|HGNC=|MCL_coexpression_id=672|UniProt=P25444|association_with_transcript=0bp_to_ENSMUST00000054289,uc008ayb.2_5end|description=CAGE_peak_1_at_Gm10420_5end,CAGE_peak_1_at_Gm5786_5end,CAGE_peak_1_at_Gm8842_5end,CAGE_peak_1_at_Rps2_5end|id=chr17:24857047..24857063,+|ontology_enrichment_celltype=CL:0000219!4.24e-09!54;CL:0000988!5.58e-09!32;CL:0002032!5.58e-09!32;CL:0000037!5.58e-09!32;CL:0000566!5.58e-09!32;CL:0000837!5.58e-09!32;CL:0002320!2.64e-08!46;CL:0000134!2.64e-08!46|ontology_enrichment_celltype_v019_2=CL:0000219,4.24e-09,54;CL:0000988,5.58e-09,32;CL:0002032,5.58e-09,32;CL:0000037,5.58e-09,32;CL:0000837,5.58e-09,32;CL:0002320,2.64e-08,46;CL:0000134,2.64e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!5.35e-09!193;UBERON:0004120!5.35e-09!193;UBERON:0006603!5.35e-09!193;UBERON:0002384!2.64e-08!46;UBERON:0001041!6.62e-08!92;UBERON:0000949!7.42e-08!72;UBERON:0000077!2.74e-07!97;UBERON:0003104!4.10e-07!131;UBERON:0009142!4.10e-07!131;UBERON:0002075!8.88e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.64e-08,46;UBERON:0000949,7.24e-08,72;UBERON:0002075,8.88e-07,19|phase1_expression=22.2606897475664,2.44282785347553,2.27499619694768,2.41971369045464,2.00358291978539,2.51818907867835,1.86890112476421,26.0829113351984,144.167651483307,15.9163877898956,110.778025441902,15.3960266860999,72.5891094908312,17.1343988741235,36.9751835615386,49.2014899757277,38.4759032970481,57.7295762605575,43.1910465858077,52.6243168229557,1.10556277196391,40.2128352363585,63.4715487607613,2.71987118748791,3.21172993494038,1.72269589234506,1.29228598847722,1.72376986148711,2.66032787238923,1.51218077855958,2.66076612786366,11.4305521222734,7.99584223859941,31.6963362030877,82.3227116291133,72.6445400216612,90.4470248242295,23.4377713212668,28.9094077473806,25.1291397107423,78.2347879081249,21.8574555186703,20.3914348273085,3.77690453926732,3.34543873024398,3.85448179539531,18.7773922643529,15.6978112593922,14.7189742432096,8.36048566019419,16.7983705950435,38.8131923785423,95.3005202407943,72.5362142011344,71.5879792173448,10.5476368774738,22.0630748752843,16.5015069528782,9.1042407386819,4.23192783417626,10.775133859605,31.5125414824293,24.9002542911119,19.3478439215501,14.8329954385046,23.4458437932213,11.085204089181,9.22123932771731,11.509546966241,9.04539786822327,12.8298226424343,9.14083150092171,13.693849539,10.534208732486,12.0765293482978,5.51531271966013,2.20231761998777,0.638436690425939,1.0752457327937,8.04506355154182,7.95942499340964,7.8137005583514,1.67509799400829,2.25105044012672,5.04234217663473,2.06240009831567,1.99320353118744,7.08317894136142,29.230310626609,32.7980570863449,53.3350659211087,43.0211938490693,20.3991400112325,7.55584468292944,12.9955283489534,17.4730485967961,0.280888840263504,4.94247935476367,2.59786004602869,6.00677276667578,17.4645840523084,2.56652954828636,0,0,54.7722333758372,54.2190112116711,39.9364311561679,1.59857431606684,7.50919862576798,6.08612770165782,33.3091827390981,19.1813251336649,19.832932764021,14.9215414147096,14.345822270556,11.0586600370114,16.3148678704687,4.62717942143717,7.96149496754887,12.4560474459505,11.0420759230197,16.0008833534623,3.72783522436244,3.22058876712702,5.23616767033638,15.8383374229327,59.1886715059246,72.5882304502023,66.9660096675051,4.19413790333504,3.66000482254901,14.4502504929794,4.69325664519146,5.37002460393694,2.70124457927428,5.353961681236,20.4697121339136,14.0579876789405,7.32895999457657,3.57751155007006,24.4626432769883,24.1397209655147,14.0448461248172,17.0296444154358,11.0899493616664,8.96796041993949,10.4008914261299,4.13925393182425,17.2454394346274,12.4810012910761,14.7798944297717,19.070028721199,19.7413546950174,16.716103993064,20.1666493679785,28.262865888226,54.7726286104323,51.469581422943,46.034486902086,15.7415587126981,16.6513502586578,21.2473232523998,9.2330446878232,12.5929108318338,15.7352455145126,10.6965614585188,14.2184902741798,11.3262382096154,9.37991144506839,9.68588038066662,6.97191762094359,10.6725990820493,11.4166059951346,12.7496097822353,3.78521907415429,8.95270127699774,2.64335026387038,0.264450566663544,29.0072020727918,21.8302471548812,19.7167215822803,16.3363654944907,16.2335972006755,19.0225626112559,17.0830462156024,17.6227881554692,14.8287773192159,12.7332142106337,11.307917052909,11.6846523125049,14.6973873914792,13.541606581297,27.3121777372438,20.4504837571415,18.0332377076929,16.6994088833158,22.4984885114446,16.4819176742249,7.52514791778662,5.90440591918409,8.32093257559286,9.37818445805684,13.0439155918346,31.2000347689096,33.2184701741313,28.1077640481067,24.9517949307859,31.3530307678142,38.193877767213,27.0434369203762,28.6979351391813,23.8868429473631,12.9391385874619,14.5134969590716,15.2898459826135,12.3763650194085,15.2487801493625,17.8504102904446,7.57488079683079,28.8026945891137,19.3928321966011,26.8197235524797,18.7752198630802,11.7254380209271,13.8065311713888,10.14694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| ||
|EntrezGene=16898,544872,639606,667847 | |||
|HGNC= | |||
|MCL_coexpression_id=672 | |||
|UniProt=P25444 | |||
|association_with_transcript=0bp_to_ENSMUST00000054289,uc008ayb.2_5end | |||
|description=CAGE_peak_1_at_Gm10420_5end,CAGE_peak_1_at_Gm5786_5end,CAGE_peak_1_at_Gm8842_5end,CAGE_peak_1_at_Rps2_5end | |||
|id=chr17:24857047..24857063,+ | |||
|ontology_enrichment_celltype=CL:0000219!4.24e-09!54;CL:0000988!5.58e-09!32;CL:0002032!5.58e-09!32;CL:0000037!5.58e-09!32;CL:0000566!5.58e-09!32;CL:0000837!5.58e-09!32;CL:0002320!2.64e-08!46;CL:0000134!2.64e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.24e-09,54;CL:0000988,5.58e-09,32;CL:0002032,5.58e-09,32;CL:0000037,5.58e-09,32;CL:0000837,5.58e-09,32;CL:0002320,2.64e-08,46;CL:0000134,2.64e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.35e-09!193;UBERON:0004120!5.35e-09!193;UBERON:0006603!5.35e-09!193;UBERON:0002384!2.64e-08!46;UBERON:0001041!6.62e-08!92;UBERON:0000949!7.42e-08!72;UBERON:0000077!2.74e-07!97;UBERON:0003104!4.10e-07!131;UBERON:0009142!4.10e-07!131;UBERON:0002075!8.88e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.64e-08,46;UBERON:0000949,7.24e-08,72;UBERON:0002075,8.88e-07,19 | |||
|phase1_expression=22.2606897475664,2.44282785347553,2.27499619694768,2.41971369045464,2.00358291978539,2.51818907867835,1.86890112476421,26.0829113351984,144.167651483307,15.9163877898956,110.778025441902,15.3960266860999,72.5891094908312,17.1343988741235,36.9751835615386,49.2014899757277,38.4759032970481,57.7295762605575,43.1910465858077,52.6243168229557,1.10556277196391,40.2128352363585,63.4715487607613,2.71987118748791,3.21172993494038,1.72269589234506,1.29228598847722,1.72376986148711,2.66032787238923,1.51218077855958,2.66076612786366,11.4305521222734,7.99584223859941,31.6963362030877,82.3227116291133,72.6445400216612,90.4470248242295,23.4377713212668,28.9094077473806,25.1291397107423,78.2347879081249,21.8574555186703,20.3914348273085,3.77690453926732,3.34543873024398,3.85448179539531,18.7773922643529,15.6978112593922,14.7189742432096,8.36048566019419,16.7983705950435,38.8131923785423,95.3005202407943,72.5362142011344,71.5879792173448,10.5476368774738,22.0630748752843,16.5015069528782,9.1042407386819,4.23192783417626,10.775133859605,31.5125414824293,24.9002542911119,19.3478439215501,14.8329954385046,23.4458437932213,11.085204089181,9.22123932771731,11.509546966241,9.04539786822327,12.8298226424343,9.14083150092171,13.693849539,10.534208732486,12.0765293482978,5.51531271966013,2.20231761998777,0.638436690425939,1.0752457327937,8.04506355154182,7.95942499340964,7.8137005583514,1.67509799400829,2.25105044012672,5.04234217663473,2.06240009831567,1.99320353118744,7.08317894136142,29.230310626609,32.7980570863449,53.3350659211087,43.0211938490693,20.3991400112325,7.55584468292944,12.9955283489534,17.4730485967961,0.280888840263504,4.94247935476367,2.59786004602869,6.00677276667578,17.4645840523084,2.56652954828636,0,0,54.7722333758372,54.2190112116711,39.9364311561679,1.59857431606684,7.50919862576798,6.08612770165782,33.3091827390981,19.1813251336649,19.832932764021,14.9215414147096,14.345822270556,11.0586600370114,16.3148678704687,4.62717942143717,7.96149496754887,12.4560474459505,11.0420759230197,16.0008833534623,3.72783522436244,3.22058876712702,5.23616767033638,15.8383374229327,59.1886715059246,72.5882304502023,66.9660096675051,4.19413790333504,3.66000482254901,14.4502504929794,4.69325664519146,5.37002460393694,2.70124457927428,5.353961681236,20.4697121339136,14.0579876789405,7.32895999457657,3.57751155007006,24.4626432769883,24.1397209655147,14.0448461248172,17.0296444154358,11.0899493616664,8.96796041993949,10.4008914261299,4.13925393182425,17.2454394346274,12.4810012910761,14.7798944297717,19.070028721199,19.7413546950174,16.716103993064,20.1666493679785,28.262865888226,54.7726286104323,51.469581422943,46.034486902086,15.7415587126981,16.6513502586578,21.2473232523998,9.2330446878232,12.5929108318338,15.7352455145126,10.6965614585188,14.2184902741798,11.3262382096154,9.37991144506839,9.68588038066662,6.97191762094359,10.6725990820493,11.4166059951346,12.7496097822353,3.78521907415429,8.95270127699774,2.64335026387038,0.264450566663544,29.0072020727918,21.8302471548812,19.7167215822803,16.3363654944907,16.2335972006755,19.0225626112559,17.0830462156024,17.6227881554692,14.8287773192159,12.7332142106337,11.307917052909,11.6846523125049,14.6973873914792,13.541606581297,27.3121777372438,20.4504837571415,18.0332377076929,16.6994088833158,22.4984885114446,16.4819176742249,7.52514791778662,5.90440591918409,8.32093257559286,9.37818445805684,13.0439155918346,31.2000347689096,33.2184701741313,28.1077640481067,24.9517949307859,31.3530307678142,38.193877767213,27.0434369203762,28.6979351391813,23.8868429473631,12.9391385874619,14.5134969590716,15.2898459826135,12.3763650194085,15.2487801493625,17.8504102904446,7.57488079683079,28.8026945891137,19.3928321966011,26.8197235524797,18.7752198630802,11.7254380209271,13.8065311713888,10.1469496886055,6.14777062014145,4.4292937929755,6.37819074629948,7.70157579163969,6.56202931090403,8.10034728056465,4.52373851817817,2.17562273527484,13.769399644533,13.2449638226272,2.24770825982909,3.7507739709505,5.73772308818364,8.83648245215305,5.99465616890888,7.80877488593277,2.36965737506079,4.54040716109849,3.56477878531831,3.39691836946599,5.26253912177363,7.01414058987149,5.13874111330481,1.92792789853084,9.9358059645788,37.3937767701236,21.1753047159649,9.73323725537959,38.4960901185892,36.1743147870922,51.9996517979372,40.9273023070299,32.1879063240042,25.2096821314021,23.0001180919717,24.7202936044704,32.4412614330096,30.0234920039025,39.0048851727495,52.5991270565753,8.85142974959849,23.7680644121329,26.9066062268129,24.0057479235383,11.8817956540323,14.8046118609719,15.7967059778036,27.0973804711993,11.2642419870581,8.04961869282517,13.8932890774626,10.5527201882547,11.1410454420175,13.7513468836195,15.6377770644109,14.4443991775654,12.8251568117134,2.03967832211561,23.0675689077101,33.2282857420788,27.7791791054568,19.9670564424972,17.2234726928492,29.7411625168479,49.6337015582058,54.5810664062266,51.1339903076368,5.72802370809068,20.0873355924021,21.7551829825728,28.62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| |||
|short_description=p1@Gm10420,p1@Gm5786,p1@Gm8842,p1@Rps2 | |||
}} |
Revision as of 13:43, 13 September 2013
Short description: | p1@Gm10420, p1@Gm5786, p1@Gm8842, p1@Rps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10420_5end, CAGE_peak_1_at_Gm5786_5end, CAGE_peak_1_at_Gm8842_5end, CAGE_peak_1_at_Rps2_5end |
Coexpression cluster: | MCL_coexpression_mm9:672 |
Association with transcript: | 0bp_to_ENSMUST00000054289, uc008ayb.2_5end |
EntrezGene: | 16898,544872,639606,667847 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.24e-09 | 54 |
hematopoietic cell | 5.58e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.58e-09 | 32 |
hematopoietic stem cell | 5.58e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.58e-09 | 32 |
connective tissue cell | 2.64e-08 | 46 |
mesenchymal cell | 2.64e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.64e-08 | 46 |
endocrine system | 7.24e-08 | 72 |
viscus | 8.88e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.