FFCP PHASE1:Mm9::chr17:26232396..26232406,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=56520|HGNC=|MCL_coexpression_id=3086|UniProt=Q9WV84,Q9D0C5|association_with_transcript=8bp_to_NM_019731,uc008bdh.1,uc008bdi.1_5end|description=CAGE_peak_4_at_Nme4_5end|id=chr17:26232396..26232406,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0.171217968225505,0,0.171200729931206,0.524522414513984,0.999329285446988,0.607425802169478,0.699561878128147,0,0,0.84877930359606,0.17008658030214,0.992909512008853,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,3.07532393792285,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.881277725829041,0.912392380975631,1.10128051297009,3.9119567217402,2.18025156380447,1.97717564461025,0.972149495371417,1.1198913730029,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,1.21389876515759,0.528990979272033,0.633831403506179,6.43804610931351,3.55717918444456,3.1496490104849,2.96659908770092,2.1314403448383,1.79760066311043,4.2264013585371,0.725827286159344,0.945041568321835,1.05162480675691,0.285650984403804,0,0.734944795289724,0.479227355091182,0,0,0.255374676170375,0,0.131886287730194,0.640413505216868,0.52091337055676,0,0.56276261003168,0,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0.679971333707751,0,0,0,0.421333260395256,1.36344258062446,1.55871602761721,2.12003744706204,1.26759077799012,0,0,7.11066703153331,0.649473123033642,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,2.08182392119363,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0.255457055208591,1.07833612055328,1.79970819298022,1.14363204365758,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.611036183101898,0,0,0.210441855886474,4.55421550369463,3.90833577536904,2.70093194708024,0.90422890701429,0.816437989815934,0.384341160854549,0.562210347358373,0,3.23351989399263,3.59301552318857,2.11141348996739,1.97276159184817,1.66828349535359,1.0447564995665,0.823128545631774,3.38358253591438,1.40442637462647,0.772043721344145,1.98914449576915,1.86413195281952,1.64168241986767,0.720248245844059,0.710234206755631,1.18058539048442,0.925602677324269,0.697601834251224,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0,1.49301775374664,2.55460339046482,1.03093969057675,1.21010114774006,1.33426826306922,1.52180500890047,0.474529061544512,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,2.65535061334314,1.37098215131675,1.1270773567308,1.62921062276251,1.74557238450863,0.911765658574141,0.632365371242573,0.147610147979602,0.470996183524124,0.370191491765402,0,1.16791574001266,1.17935397067922,2.02375901146368,1.62288097110802,0.482354319504834,0.50925170356284,0.863088412352432,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0,2.84237117655727,1.62964976442026,1.35796068620151,0.938760993154008,0.837531287209079,0.714130922658041,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0.117211686592203,1.3114795630134,0.757412781613119,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,1.11399337041197,1.13230612315533,0.404810701674894,1.16902343164525,0.395287777946524,0,0.425820255624806,1.78065603667255,0.488660878060728,0.329940245945071,1.32745138339963,3.64170954232472,3.02323556964751,0.754420319023592,1.47650946440386,0.307435147943927,0.516856586336442,1.81766864738753,1.42598951353889,0,0,1.03135543248187,0.340439605753788,2.16073312837572,2.32845630808958,1.92903331528433,1.41872186913819,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.241251699712623,0.477489376012546,0.164140899745061,0,0,0.170870880797853,2.68302928352189,1.11116716421827,1.13021074202815,0.546776910884101,0.457556346413045,1.5298058699447,1.81936888020755,0.552799895217695,0,2.21435195506795,1.42323626988794,0.324016022465404,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0,1.49516546043979,1.82004339502807,0.777804753376191,0.387479470433193,0.844780627453891,0.352071715937262,0.13020438484395,0.838874755405687,0.483168241652012,0.288030006257865,0.948033361884535,2.8381530140623,0.616265742988964,0.909445760844565,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.304827226619999,0.100826185136841,0.0974578807397524,0.481059208201647,0.116876902181569,0.453460767230423,0.221985953374065,0.986852422704233,1.67884616364078,0.772758376128762,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,1.59609949360412,1.19513524027894,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.25347929989024,1.13175804831646,0.468207537349412,0.832326981263301,0.631790158511746,2.38146845641537,0.811190281613988,0.578727661391115,0,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,0.436039249896986,1.12931256498397,0.592302255241736,0.73171189149109,0.789209134313529,0.814824683075171,1.12228454331548,0.949080144993393,0.788035859004508,0.818462086339379,0.929621047115796,1.15743966588685,0.249810577937946,1.16965804222704,0.429742108096597,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p4@Nme4}} | ||
|EntrezGene=56520 | |||
|HGNC= | |||
|MCL_coexpression_id=3086 | |||
|UniProt=Q9WV84,Q9D0C5 | |||
|association_with_transcript=8bp_to_NM_019731,uc008bdh.1,uc008bdi.1_5end | |||
|description=CAGE_peak_4_at_Nme4_5end | |||
|id=chr17:26232396..26232406,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0.171217968225505,0,0.171200729931206,0.524522414513984,0.999329285446988,0.607425802169478,0.699561878128147,0,0,0.84877930359606,0.17008658030214,0.992909512008853,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,3.07532393792285,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.881277725829041,0.912392380975631,1.10128051297009,3.9119567217402,2.18025156380447,1.97717564461025,0.972149495371417,1.1198913730029,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,1.21389876515759,0.528990979272033,0.633831403506179,6.43804610931351,3.55717918444456,3.1496490104849,2.96659908770092,2.1314403448383,1.79760066311043,4.2264013585371,0.725827286159344,0.945041568321835,1.05162480675691,0.285650984403804,0,0.734944795289724,0.479227355091182,0,0,0.255374676170375,0,0.131886287730194,0.640413505216868,0.52091337055676,0,0.56276261003168,0,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.151143120213571,0,0,0.679971333707751,0,0,0,0.421333260395256,1.36344258062446,1.55871602761721,2.12003744706204,1.26759077799012,0,0,7.11066703153331,0.649473123033642,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,2.08182392119363,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0,0,0.647067399789637,0.441683036920787,0,0,0,0,0.255457055208591,1.07833612055328,1.79970819298022,1.14363204365758,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.611036183101898,0,0,0.210441855886474,4.55421550369463,3.90833577536904,2.70093194708024,0.90422890701429,0.816437989815934,0.384341160854549,0.562210347358373,0,3.23351989399263,3.59301552318857,2.11141348996739,1.97276159184817,1.66828349535359,1.0447564995665,0.823128545631774,3.38358253591438,1.40442637462647,0.772043721344145,1.98914449576915,1.86413195281952,1.64168241986767,0.720248245844059,0.710234206755631,1.18058539048442,0.925602677324269,0.697601834251224,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0,1.49301775374664,2.55460339046482,1.03093969057675,1.21010114774006,1.33426826306922,1.52180500890047,0.474529061544512,0.329397909448022,0,0,0.38992817423824,0,0,0.199141273254367,2.65535061334314,1.37098215131675,1.1270773567308,1.62921062276251,1.74557238450863,0.911765658574141,0.632365371242573,0.147610147979602,0.470996183524124,0.370191491765402,0,1.16791574001266,1.17935397067922,2.02375901146368,1.62288097110802,0.482354319504834,0.50925170356284,0.863088412352432,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0,2.84237117655727,1.62964976442026,1.35796068620151,0.938760993154008,0.837531287209079,0.714130922658041,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0.117211686592203,1.3114795630134,0.757412781613119,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,1.11399337041197,1.13230612315533,0.404810701674894,1.16902343164525,0.395287777946524,0,0.425820255624806,1.78065603667255,0.488660878060728,0.329940245945071,1.32745138339963,3.64170954232472,3.02323556964751,0.754420319023592,1.47650946440386,0.307435147943927,0.516856586336442,1.81766864738753,1.42598951353889,0,0,1.03135543248187,0.340439605753788,2.16073312837572,2.32845630808958,1.92903331528433,1.41872186913819,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.241251699712623,0.477489376012546,0.164140899745061,0,0,0.170870880797853,2.68302928352189,1.11116716421827,1.13021074202815,0.546776910884101,0.457556346413045,1.5298058699447,1.81936888020755,0.552799895217695,0,2.21435195506795,1.42323626988794,0.324016022465404,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0,0.129614973291793,0,0,1.49516546043979,1.82004339502807,0.777804753376191,0.387479470433193,0.844780627453891,0.352071715937262,0.13020438484395,0.838874755405687,0.483168241652012,0.288030006257865,0.948033361884535,2.8381530140623,0.616265742988964,0.909445760844565,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.304827226619999,0.100826185136841,0.0974578807397524,0.481059208201647,0.116876902181569,0.453460767230423,0.221985953374065,0.986852422704233,1.67884616364078,0.772758376128762,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,2.80225838477277,1.59609949360412,1.19513524027894,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.25347929989024,1.13175804831646,0.468207537349412,0.832326981263301,0.631790158511746,2.38146845641537,0.811190281613988,0.578727661391115,0,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,0.436039249896986,1.12931256498397,0.592302255241736,0.73171189149109,0.789209134313529,0.814824683075171,1.12228454331548,0.949080144993393,0.788035859004508,0.818462086339379,0.929621047115796,1.15743966588685,0.249810577937946,1.16965804222704,0.429742108096597,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Nme4 | |||
}} |
Revision as of 13:48, 13 September 2013
Short description: | p4@Nme4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nme4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3086 |
Association with transcript: | 8bp_to_NM_019731, uc008bdh.1, uc008bdi.1_5end |
EntrezGene: | Nme4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.