Personal tools

FFCP PHASE1:Mm9::chr17:33775034..33775055,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=378460|HGNC=|MCL_coexpression_id=3|UniProt=E9PYJ5|association_with_transcript=0bp_to_ENSMUST00000116619,NR_028279,uc008bza.2_5end|description=CAGE_peak_1_at_Pram1_5end|id=chr17:33775034..33775055,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!1.02e-08!22;UBERON:0004765!1.02e-08!22;UBERON:0001434!1.02e-08!22;UBERON:0002405!1.27e-08!70;UBERON:0002371!4.51e-08!16;UBERON:0002204!7.88e-08!32|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.31e-10,22;UBERON:0004765,1.31e-10,22;UBERON:0001434,1.31e-10,22;UBERON:0002204,1.04e-09,32;UBERON:0002371,1.41e-09,16;UBERON:0002107,1.13e-07,22;UBERON:0007499,1.13e-07,22;UBERON:0006925,1.13e-07,22;UBERON:0009497,1.13e-07,22;UBERON:0000015,1.13e-07,22;UBERON:0002423,1.13e-07,22;UBERON:0006235,1.13e-07,22;UBERON:0008835,1.13e-07,22;UBERON:0003894,1.13e-07,22;UBERON:0004161,1.13e-07,22;UBERON:0008836,1.13e-07,22;UBERON:0009854,4.76e-07,23;UBERON:0009856,4.76e-07,23|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,4.33042690360362,5.26435695213547,2.79824751251259,3.94327706697797,3.29074640653773,3.39511721438424,1.02051948181284,4.76596565764249,1.04479915655574,1.11994695955385,1.60586496747019,0,0,0,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,1083.15986034712,452.39316447928,771.673998617379,904.111797103669,911.865722419525,727.294508840668,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,1.02903774414379,0.286533439938757,0.515672092277442,0,0,0,0,0,9.44894703145469,22.7439263390404,12.7886420690298,5.09320187881288,8.4528027170742,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0,0.294628585473668,0.569486723196412,0,0.075726193333184,0.0755715601067855,0.289864488701678,3.44169550792555,0,0,1.29955283489534,2.68816132258401,10.5333315098814,0,0,0,0,0,0,0,0,0,0,3.53970027129086,24.3401610628341,1.1875371125186,1.04091196059682,0.913396434936424,1.15307748628029,0.753613202763113,1.88141931417128,0.376999773989026,0,3.32578520915797,131.806972240531,7.44127509758082,33.7887523244402,31.0320162006542,0,0.292780797011547,0.41889341362691,3.83185582812887,3.47463861067169,1.79970819298022,10.1656181658452,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.712875546952214,52.4997415974593,0.505445516867349,0,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.136072998302656,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.823128545631774,0.59710280045548,14.7464769335779,13.3820911699652,15.344828967362,0,0.234526059981096,0.180062061461015,0.473489471170421,0.983821158737019,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,1.09775057645525,0.536825675041487,0,0.102904612379284,0.991256348951394,5.28901133327089,0.213288250535234,0,1.15980715189884,1.81515172161008,1.11189021922435,0.380451252225118,1.89811624617805,0.494096864172033,3.77002813200404,3.58121649674071,3.11942539390592,3.59527763461689,3.24207074812041,4.18196673834171,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.420814919341911,0.379419222745544,0.295220295959204,0.627994911365499,0.123397163921801,4.44678940630723,1.66845105716094,2.35870794135844,4.04751802292737,16.0259495896917,19.5353499399458,29.0273471030819,51.4976086036951,34.5348033030825,14.0026320725922,23.0029130443767,20.4677521217677,9.04909252032226,4.54641980304801,5.20252499213545,1.4473305640901,12.9327233116623,0,0.488894929326078,0,0.704070744865506,1.84256883185997,4.99891645860629,4.68320754858717,4.41378403497335,3.32197034473162,0.956728611944923,4.7520361267564,6.73471429276993,4.91806799177139,7.53956419696361,5.4390568381871,0,1.65562047782839,0.321101179975584,0,0,5.04941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.99358059645788,0.890328018336276,1.14020871547503,1.97964147567043,0,0.728341908464944,0.302323556964751,1.32023555829129,3.2483208216885,1.22974059177571,2.32585463851399,1.81766864738753,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,0,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.65954501176592,0.807322133479528,0.482503399425247,0.477489376012546,0,4.95517422270746,1.11255181206306,38.6168190603147,18.1620443807636,70.7443094552299,24.2995309536051,15.5831419601969,8.23601423543482,0.509935289981566,2.79902904647316,3.86959926652387,0,0.158167996790568,1.21991680276109,1.08005340821801,1.04544148007234,0.87345025498471,0.809186078308924,2.81021749466142,0.523511883968059,1.29614973291793,0,0,0,0.330916980914195,0.777804753376191,0.516639293910924,2.02747350588934,2.58185925020659,0.2604087696879,0.104859344425711,0,0,1.26404448251271,0.810900861160657,1.43795340030758,0.51968329191118,0.358053391334963,0.79472541912506,0.240390899039938,0.443068581523732,0.605798699688886,0.15241361331,0,0.292373642219257,0.288635524920988,0.584384510907845,0.453460767230423,0,0,0,0.965947970160952,2.25218970541418,2.19781949120718,6.85978813053011,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,2.67417388775123,1.46729213839588,3.12533964365024,3.77819437262746,5.35691148821125,2.88827288632634,3.28506375292937,5.0695859978048,2.26351609663291,3.93294331373506,2.56100609619477,3.0440798546475,2.38146845641537,2.20180219295225,2.50781986602817,4.53294490883637,2.79677948255355,4.80016953339582,3.54951612318675,1.43061713968393,3.48831399917588,3.29382831453657,3.38458431566706,2.92684756596436,3.15683653725411,4.6173398707593,4.48913817326191,2.60997039873183,2.36410757701352,1.22769312950907,2.78886314134739,5.20847849649082,0.749431733813838,5.6143586026898,7.09074478359384,5.54736162999646,12.7943023089319,12.9845987947436|short_description=p1@Pram1}}
|EntrezGene=378460
|HGNC=
|MCL_coexpression_id=3
|UniProt=E9PYJ5
|association_with_transcript=0bp_to_ENSMUST00000116619,NR_028279,uc008bza.2_5end
|description=CAGE_peak_1_at_Pram1_5end
|id=chr17:33775034..33775055,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001474!1.02e-08!22;UBERON:0004765!1.02e-08!22;UBERON:0001434!1.02e-08!22;UBERON:0002405!1.27e-08!70;UBERON:0002371!4.51e-08!16;UBERON:0002204!7.88e-08!32
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.31e-10,22;UBERON:0004765,1.31e-10,22;UBERON:0001434,1.31e-10,22;UBERON:0002204,1.04e-09,32;UBERON:0002371,1.41e-09,16;UBERON:0002107,1.13e-07,22;UBERON:0007499,1.13e-07,22;UBERON:0006925,1.13e-07,22;UBERON:0009497,1.13e-07,22;UBERON:0000015,1.13e-07,22;UBERON:0002423,1.13e-07,22;UBERON:0006235,1.13e-07,22;UBERON:0008835,1.13e-07,22;UBERON:0003894,1.13e-07,22;UBERON:0004161,1.13e-07,22;UBERON:0008836,1.13e-07,22;UBERON:0009854,4.76e-07,23;UBERON:0009856,4.76e-07,23
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,4.33042690360362,5.26435695213547,2.79824751251259,3.94327706697797,3.29074640653773,3.39511721438424,1.02051948181284,4.76596565764249,1.04479915655574,1.11994695955385,1.60586496747019,0,0,0,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,1083.15986034712,452.39316447928,771.673998617379,904.111797103669,911.865722419525,727.294508840668,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,1.02903774414379,0.286533439938757,0.515672092277442,0,0,0,0,0,9.44894703145469,22.7439263390404,12.7886420690298,5.09320187881288,8.4528027170742,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0,0.294628585473668,0.569486723196412,0,0.075726193333184,0.0755715601067855,0.289864488701678,3.44169550792555,0,0,1.29955283489534,2.68816132258401,10.5333315098814,0,0,0,0,0,0,0,0,0,0,3.53970027129086,24.3401610628341,1.1875371125186,1.04091196059682,0.913396434936424,1.15307748628029,0.753613202763113,1.88141931417128,0.376999773989026,0,3.32578520915797,131.806972240531,7.44127509758082,33.7887523244402,31.0320162006542,0,0.292780797011547,0.41889341362691,3.83185582812887,3.47463861067169,1.79970819298022,10.1656181658452,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.712875546952214,52.4997415974593,0.505445516867349,0,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.136072998302656,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.823128545631774,0.59710280045548,14.7464769335779,13.3820911699652,15.344828967362,0,0.234526059981096,0.180062061461015,0.473489471170421,0.983821158737019,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,1.09775057645525,0.536825675041487,0,0.102904612379284,0.991256348951394,5.28901133327089,0.213288250535234,0,1.15980715189884,1.81515172161008,1.11189021922435,0.380451252225118,1.89811624617805,0.494096864172033,3.77002813200404,3.58121649674071,3.11942539390592,3.59527763461689,3.24207074812041,4.18196673834171,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.420814919341911,0.379419222745544,0.295220295959204,0.627994911365499,0.123397163921801,4.44678940630723,1.66845105716094,2.35870794135844,4.04751802292737,16.0259495896917,19.5353499399458,29.0273471030819,51.4976086036951,34.5348033030825,14.0026320725922,23.0029130443767,20.4677521217677,9.04909252032226,4.54641980304801,5.20252499213545,1.4473305640901,12.9327233116623,0,0.488894929326078,0,0.704070744865506,1.84256883185997,4.99891645860629,4.68320754858717,4.41378403497335,3.32197034473162,0.956728611944923,4.7520361267564,6.73471429276993,4.91806799177139,7.53956419696361,5.4390568381871,0,1.65562047782839,0.321101179975584,0,0,5.04941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.99358059645788,0.890328018336276,1.14020871547503,1.97964147567043,0,0.728341908464944,0.302323556964751,1.32023555829129,3.2483208216885,1.22974059177571,2.32585463851399,1.81766864738753,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,0,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.65954501176592,0.807322133479528,0.482503399425247,0.477489376012546,0,4.95517422270746,1.11255181206306,38.6168190603147,18.1620443807636,70.7443094552299,24.2995309536051,15.5831419601969,8.23601423543482,0.509935289981566,2.79902904647316,3.86959926652387,0,0.158167996790568,1.21991680276109,1.08005340821801,1.04544148007234,0.87345025498471,0.809186078308924,2.81021749466142,0.523511883968059,1.29614973291793,0,0,0,0.330916980914195,0.777804753376191,0.516639293910924,2.02747350588934,2.58185925020659,0.2604087696879,0.104859344425711,0,0,1.26404448251271,0.810900861160657,1.43795340030758,0.51968329191118,0.358053391334963,0.79472541912506,0.240390899039938,0.443068581523732,0.605798699688886,0.15241361331,0,0.292373642219257,0.288635524920988,0.584384510907845,0.453460767230423,0,0,0,0.965947970160952,2.25218970541418,2.19781949120718,6.85978813053011,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,2.67417388775123,1.46729213839588,3.12533964365024,3.77819437262746,5.35691148821125,2.88827288632634,3.28506375292937,5.0695859978048,2.26351609663291,3.93294331373506,2.56100609619477,3.0440798546475,2.38146845641537,2.20180219295225,2.50781986602817,4.53294490883637,2.79677948255355,4.80016953339582,3.54951612318675,1.43061713968393,3.48831399917588,3.29382831453657,3.38458431566706,2.92684756596436,3.15683653725411,4.6173398707593,4.48913817326191,2.60997039873183,2.36410757701352,1.22769312950907,2.78886314134739,5.20847849649082,0.749431733813838,5.6143586026898,7.09074478359384,5.54736162999646,12.7943023089319,12.9845987947436
|short_description=p1@Pram1
}}

Revision as of 14:08, 13 September 2013

Short description:p1@Pram1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pram1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000116619, NR_028279, uc008bza.2_5end
EntrezGene:Pram1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pram1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81083.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1452.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3771.67
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9904.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2911.87
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4727.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H924.34
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G2131.81
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A633.79
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.17
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A252.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.38
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.34
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D716.03
liver, embryo E16.CNhs10523.462-17F519.54
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G451.50
liver, neonate N00.CNhs11117.641-24F434.53
liver, neonate N03.CNhs11123.1345-25G214.00
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H220.47
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G238.62
spleen, embryo E16.CNhs11035.461-43C118.16
spleen, embryo E18.CNhs11011.1271-21F270.74
spleen, neonate N10.CNhs11116.752-24D124.30
spleen, neonate N20.CNhs11112.824-19H115.58
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D112.79
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
bone element1.31e-1022
skeletal element1.31e-1022
skeletal system1.31e-1022
musculoskeletal system1.04e-0932
bone marrow1.41e-0916
liver1.13e-0722
epithelial sac1.13e-0722
digestive gland1.13e-0722
epithelium of foregut-midgut junction1.13e-0722
anatomical boundary1.13e-0722
hepatobiliary system1.13e-0722
foregut-midgut junction1.13e-0722
hepatic diverticulum1.13e-0722
liver primordium1.13e-0722
septum transversum1.13e-0722
liver bud1.13e-0722
digestive tract diverticulum4.76e-0723
sac4.76e-0723







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:33775034..33775055,%2B&oldid=2942422"