FFCP PHASE1:Mm9::chr18:55130692..55130726,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:55130692..55130726,+|id=chr18:55130692..55130726,+|ontology_enrichment_celltype=CL:0000988!9.13e-08!32;CL:0002032!9.13e-08!32;CL:0000037!9.13e-08!32;CL:0000566!9.13e-08!32;CL:0000837!9.13e-08!32|ontology_enrichment_celltype_v019_2=CL:0000355,1.30e-11,9|ontology_enrichment_disease=DOID:0060100!2.28e-12!3;DOID:4045!2.28e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-33,3;DOID:4045,2.80e-33,3;DOID:0050686,4.67e-17,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.30e-11,9;UBERON:0002036,1.30e-11,9;UBERON:0002385,1.30e-11,9;UBERON:0000486,1.30e-11,9;UBERON:0007503,1.30e-11,9;UBERON:0001015,1.30e-11,9;UBERON:0002329,1.30e-11,9;UBERON:0003082,1.30e-11,9;UBERON:0003059,1.30e-11,9;UBERON:0007282,1.30e-11,9;UBERON:0004290,1.30e-11,9;UBERON:0009618,1.30e-11,9;UBERON:0000383,1.61e-10,10;UBERON:0007524,1.27e-09,11;UBERON:0003077,1.27e-09,11;UBERON:0007285,1.27e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.906676722619,2.09409497589519,19.4116391050235,3.41522742479223,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:55130692..55130726,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:55130692..55130726,+ | |||
|id=chr18:55130692..55130726,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.13e-08!32;CL:0002032!9.13e-08!32;CL:0000037!9.13e-08!32;CL:0000566!9.13e-08!32;CL:0000837!9.13e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.30e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.28e-12!3;DOID:4045!2.28e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-33,3;DOID:4045,2.80e-33,3;DOID:0050686,4.67e-17,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.30e-11,9;UBERON:0002036,1.30e-11,9;UBERON:0002385,1.30e-11,9;UBERON:0000486,1.30e-11,9;UBERON:0007503,1.30e-11,9;UBERON:0001015,1.30e-11,9;UBERON:0002329,1.30e-11,9;UBERON:0003082,1.30e-11,9;UBERON:0003059,1.30e-11,9;UBERON:0007282,1.30e-11,9;UBERON:0004290,1.30e-11,9;UBERON:0009618,1.30e-11,9;UBERON:0000383,1.61e-10,10;UBERON:0007524,1.27e-09,11;UBERON:0003077,1.27e-09,11;UBERON:0007285,1.27e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.906676722619,2.09409497589519,19.4116391050235,3.41522742479223,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:55130692..55130726,+ | |||
}} |
Revision as of 16:21, 13 September 2013
Short description: | p@chr18:55130692..55130726, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:55130692..55130726, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.30e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.30e-11 | 9 |
striated muscle tissue | 1.30e-11 | 9 |
muscle tissue | 1.30e-11 | 9 |
multilaminar epithelium | 1.30e-11 | 9 |
epithelial vesicle | 1.30e-11 | 9 |
musculature | 1.30e-11 | 9 |
somite | 1.30e-11 | 9 |
myotome | 1.30e-11 | 9 |
presomitic mesoderm | 1.30e-11 | 9 |
presumptive segmental plate | 1.30e-11 | 9 |
dermomyotome | 1.30e-11 | 9 |
trunk paraxial mesoderm | 1.30e-11 | 9 |
musculature of body | 1.61e-10 | 10 |
dense mesenchyme tissue | 1.27e-09 | 11 |
paraxial mesoderm | 1.27e-09 | 11 |
presumptive paraxial mesoderm | 1.27e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.80e-33 | 3 |
muscle cancer | 2.80e-33 | 3 |
organ system cancer | 4.67e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.