FFCP PHASE1:Mm9::chr18:60972021..60972032,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=829|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:60972021..60972032,+|id=chr18:60972021..60972032,+|ontology_enrichment_celltype=CL:0000553!9.82e-08!6;CL:0000556!9.82e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,9.70e-19,6;CL:0000556,9.70e-19,6;CL:0000839,1.88e-14,13;CL:0000050,2.80e-12,9;CL:0000763,1.69e-11,16;CL:0002027,1.29e-09,3;CL:0002006,1.29e-09,3;CL:0002024,1.29e-09,3;CL:0000049,1.77e-09,19;CL:0002031,7.63e-09,25;CL:0002476,3.89e-07,2;CL:0000473,6.86e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.32e-16!48;UBERON:0002390!1.11e-13!45;UBERON:0003061!1.11e-13!45;UBERON:0002405!1.42e-12!70;UBERON:0001007!5.49e-11!128;UBERON:0001555!5.49e-11!128;UBERON:0007026!5.49e-11!128;UBERON:0000344!1.20e-10!15;UBERON:0004119!1.49e-10!130;UBERON:0000925!1.49e-10!130;UBERON:0006595!1.49e-10!130;UBERON:0004921!8.98e-10!126;UBERON:0004185!8.98e-10!126;UBERON:0004923!1.81e-09!24;UBERON:0001242!1.22e-08!13;UBERON:0000060!1.22e-08!13;UBERON:0001262!1.22e-08!13;UBERON:0004786!1.22e-08!13;UBERON:0005911!8.65e-08!69;UBERON:0004177!9.83e-08!29;UBERON:0002371!4.10e-07!16;UBERON:0001004!7.01e-07!42;UBERON:0003408!7.70e-07!24;UBERON:0006562!8.68e-07!24;UBERON:0001557!8.68e-07!24;UBERON:0001042!8.68e-07!24;UBERON:0008814!8.68e-07!24;UBERON:0009145!8.68e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.26e-18,15;UBERON:0004923,6.44e-16,24;UBERON:0002371,2.23e-14,16;UBERON:0001242,1.24e-13,13;UBERON:0001262,1.24e-13,13;UBERON:0004786,1.24e-13,13;UBERON:0002193,1.98e-11,48;UBERON:0002405,1.98e-11,48;UBERON:0002465,2.11e-10,3;UBERON:0000331,4.27e-10,3;UBERON:0002116,4.27e-10,3;UBERON:0001204,4.27e-10,3;UBERON:0001168,4.27e-10,3;UBERON:0001474,5.02e-10,22;UBERON:0004765,5.02e-10,22;UBERON:0001434,5.02e-10,22;UBERON:0002108,1.14e-07,4;UBERON:0001962,1.66e-07,2;UBERON:0001961,1.66e-07,2;UBERON:0001744,1.66e-07,2;UBERON:0002390,1.87e-07,45;UBERON:0003061,1.87e-07,45|phase1_expression=0,1.04692622291808,0.454999239389536,1.81478526784098,3.50627010962443,0,0.934450562382103,0,0.281577444303333,0,0,0.0797721589953364,0,0,1.66554880907831,3.03712901084739,1.39912375625629,15.1421839371954,13.7114433605739,11.0341309467488,0.680346321208558,0.198581902401771,0,4.95976510659561,4.12936705920906,0.57423196411502,1.29228598847722,1.29282739611533,6.46079626151671,3.2763916868791,1.77384408524244,0,0,0,0,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8050431511593,0.725362142011344,0,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,3.88406825470758,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.86759614151947,0,0,0,0,0,0,0,3.32094171771169,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.65209391491899,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0.964887042726734,0.923765950833023,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0.81931657357869,1.38147985492716,0.723245292907558,24.1266054302836,1.08781136763742,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0,0,0.328281799490123,0.291480836629851,0,2.56306321196779,0,0,0.188368457004691,0.820165366326151,1.37266903923914,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0.523511883968059,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.924398614483445,1.03936658382236,0.716106782669926,0.79472541912506,0.480781798079875,0.443068581523732,0.807731599585181,0.609654453239999,0.907435666231565,0.682205165178267,0.673482891482306,0.350630706544707,0.453460767230423,0,0,0,0.579568782096571,0,0.36630324853453,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:60972021..60972032,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=829 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:60972021..60972032,+ | |||
|id=chr18:60972021..60972032,+ | |||
|ontology_enrichment_celltype=CL:0000553!9.82e-08!6;CL:0000556!9.82e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.70e-19,6;CL:0000556,9.70e-19,6;CL:0000839,1.88e-14,13;CL:0000050,2.80e-12,9;CL:0000763,1.69e-11,16;CL:0002027,1.29e-09,3;CL:0002006,1.29e-09,3;CL:0002024,1.29e-09,3;CL:0000049,1.77e-09,19;CL:0002031,7.63e-09,25;CL:0002476,3.89e-07,2;CL:0000473,6.86e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.32e-16!48;UBERON:0002390!1.11e-13!45;UBERON:0003061!1.11e-13!45;UBERON:0002405!1.42e-12!70;UBERON:0001007!5.49e-11!128;UBERON:0001555!5.49e-11!128;UBERON:0007026!5.49e-11!128;UBERON:0000344!1.20e-10!15;UBERON:0004119!1.49e-10!130;UBERON:0000925!1.49e-10!130;UBERON:0006595!1.49e-10!130;UBERON:0004921!8.98e-10!126;UBERON:0004185!8.98e-10!126;UBERON:0004923!1.81e-09!24;UBERON:0001242!1.22e-08!13;UBERON:0000060!1.22e-08!13;UBERON:0001262!1.22e-08!13;UBERON:0004786!1.22e-08!13;UBERON:0005911!8.65e-08!69;UBERON:0004177!9.83e-08!29;UBERON:0002371!4.10e-07!16;UBERON:0001004!7.01e-07!42;UBERON:0003408!7.70e-07!24;UBERON:0006562!8.68e-07!24;UBERON:0001557!8.68e-07!24;UBERON:0001042!8.68e-07!24;UBERON:0008814!8.68e-07!24;UBERON:0009145!8.68e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.26e-18,15;UBERON:0004923,6.44e-16,24;UBERON:0002371,2.23e-14,16;UBERON:0001242,1.24e-13,13;UBERON:0001262,1.24e-13,13;UBERON:0004786,1.24e-13,13;UBERON:0002193,1.98e-11,48;UBERON:0002405,1.98e-11,48;UBERON:0002465,2.11e-10,3;UBERON:0000331,4.27e-10,3;UBERON:0002116,4.27e-10,3;UBERON:0001204,4.27e-10,3;UBERON:0001168,4.27e-10,3;UBERON:0001474,5.02e-10,22;UBERON:0004765,5.02e-10,22;UBERON:0001434,5.02e-10,22;UBERON:0002108,1.14e-07,4;UBERON:0001962,1.66e-07,2;UBERON:0001961,1.66e-07,2;UBERON:0001744,1.66e-07,2;UBERON:0002390,1.87e-07,45;UBERON:0003061,1.87e-07,45 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.81478526784098,3.50627010962443,0,0.934450562382103,0,0.281577444303333,0,0,0.0797721589953364,0,0,1.66554880907831,3.03712901084739,1.39912375625629,15.1421839371954,13.7114433605739,11.0341309467488,0.680346321208558,0.198581902401771,0,4.95976510659561,4.12936705920906,0.57423196411502,1.29228598847722,1.29282739611533,6.46079626151671,3.2763916868791,1.77384408524244,0,0,0,0,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8050431511593,0.725362142011344,0,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,3.88406825470758,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.86759614151947,0,0,0,0,0,0,0,3.32094171771169,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.65209391491899,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0.964887042726734,0.923765950833023,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0.81931657357869,1.38147985492716,0.723245292907558,24.1266054302836,1.08781136763742,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0,0,0.328281799490123,0.291480836629851,0,2.56306321196779,0,0,0.188368457004691,0.820165366326151,1.37266903923914,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0.523511883968059,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.924398614483445,1.03936658382236,0.716106782669926,0.79472541912506,0.480781798079875,0.443068581523732,0.807731599585181,0.609654453239999,0.907435666231565,0.682205165178267,0.673482891482306,0.350630706544707,0.453460767230423,0,0,0,0.579568782096571,0,0.36630324853453,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:60972021..60972032,+ | |||
}} |
Revision as of 16:27, 13 September 2013
Short description: | p@chr18:60972021..60972032, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:60972021..60972032, + |
Coexpression cluster: | MCL_coexpression_mm9:829 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.70e-19 | 6 |
megakaryocyte | 9.70e-19 | 6 |
myeloid lineage restricted progenitor cell | 1.88e-14 | 13 |
megakaryocyte-erythroid progenitor cell | 2.80e-12 | 9 |
myeloid cell | 1.69e-11 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.29e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.29e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.29e-09 | 3 |
common myeloid progenitor | 1.77e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 7.63e-09 | 25 |
bone marrow macrophage | 3.89e-07 | 2 |
defensive cell | 6.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.26e-18 | 15 |
organ component layer | 6.44e-16 | 24 |
bone marrow | 2.23e-14 | 16 |
intestinal mucosa | 1.24e-13 | 13 |
wall of intestine | 1.24e-13 | 13 |
gastrointestinal system mucosa | 1.24e-13 | 13 |
hemolymphoid system | 1.98e-11 | 48 |
immune system | 1.98e-11 | 48 |
lymphoid system | 2.11e-10 | 3 |
ileal mucosa | 4.27e-10 | 3 |
ileum | 4.27e-10 | 3 |
mucosa of small intestine | 4.27e-10 | 3 |
wall of small intestine | 4.27e-10 | 3 |
bone element | 5.02e-10 | 22 |
skeletal element | 5.02e-10 | 22 |
skeletal system | 5.02e-10 | 22 |
small intestine | 1.14e-07 | 4 |
gut-associated lymphoid tissue | 1.66e-07 | 2 |
mucosa-associated lymphoid tissue | 1.66e-07 | 2 |
lymphoid tissue | 1.66e-07 | 2 |
hematopoietic system | 1.87e-07 | 45 |
blood island | 1.87e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.