FFCP PHASE1:Mm9::chr18:82695250..82695287,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:82695250..82695287,-|id=chr18:82695250..82695287,-|ontology_enrichment_celltype=CL:0000791!2.01e-23!9;CL:0000789!2.01e-23!9;CL:0002420!2.01e-23!9;CL:0002419!2.01e-23!9;CL:0000790!2.01e-23!9;CL:0000624!1.47e-19!8;CL:0000084!4.81e-19!11;CL:0000827!4.81e-19!11;CL:0000893!3.35e-18!6;CL:0002489!3.35e-18!6;CL:0000898!3.35e-18!6;CL:0000809!3.35e-18!6;CL:0000810!3.35e-18!6;CL:0000895!3.35e-18!6;CL:0000808!3.35e-18!6;CL:0000894!3.35e-18!6;CL:0000806!3.35e-18!6;CL:0000807!3.35e-18!6;CL:0000805!3.35e-18!6;CL:0002425!3.35e-18!6;CL:0002436!3.35e-18!6;CL:0002427!3.35e-18!6;CL:0002428!3.35e-18!6;CL:0002429!3.35e-18!6;CL:0002433!3.35e-18!6;CL:0002431!3.35e-18!6;CL:0002432!3.35e-18!6;CL:0000838!2.12e-17!12;CL:0000542!5.22e-16!13;CL:0000051!5.22e-16!13;CL:0002031!5.45e-13!25;CL:0000738!4.50e-12!17;CL:0002087!4.50e-12!17;CL:0000988!7.10e-10!32;CL:0002032!7.10e-10!32;CL:0000037!7.10e-10!32;CL:0000566!7.10e-10!32;CL:0000837!7.10e-10!32;CL:0000034!8.03e-07!97|ontology_enrichment_celltype_v019_2=CL:0000355,8.40e-09,9|ontology_enrichment_disease=DOID:0060100!6.91e-15!3;DOID:4045!6.91e-15!3;DOID:0050686!1.12e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.281577444303333,0.468129052643987,0,0.0797721589953364,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,2.3440060335714,0.523523743973798,45.2938245783881,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:82695250..82695287,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:82695250..82695287,- | |||
|id=chr18:82695250..82695287,- | |||
|ontology_enrichment_celltype=CL:0000791!2.01e-23!9;CL:0000789!2.01e-23!9;CL:0002420!2.01e-23!9;CL:0002419!2.01e-23!9;CL:0000790!2.01e-23!9;CL:0000624!1.47e-19!8;CL:0000084!4.81e-19!11;CL:0000827!4.81e-19!11;CL:0000893!3.35e-18!6;CL:0002489!3.35e-18!6;CL:0000898!3.35e-18!6;CL:0000809!3.35e-18!6;CL:0000810!3.35e-18!6;CL:0000895!3.35e-18!6;CL:0000808!3.35e-18!6;CL:0000894!3.35e-18!6;CL:0000806!3.35e-18!6;CL:0000807!3.35e-18!6;CL:0000805!3.35e-18!6;CL:0002425!3.35e-18!6;CL:0002436!3.35e-18!6;CL:0002427!3.35e-18!6;CL:0002428!3.35e-18!6;CL:0002429!3.35e-18!6;CL:0002433!3.35e-18!6;CL:0002431!3.35e-18!6;CL:0002432!3.35e-18!6;CL:0000838!2.12e-17!12;CL:0000542!5.22e-16!13;CL:0000051!5.22e-16!13;CL:0002031!5.45e-13!25;CL:0000738!4.50e-12!17;CL:0002087!4.50e-12!17;CL:0000988!7.10e-10!32;CL:0002032!7.10e-10!32;CL:0000037!7.10e-10!32;CL:0000566!7.10e-10!32;CL:0000837!7.10e-10!32;CL:0000034!8.03e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,8.40e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.91e-15!3;DOID:4045!6.91e-15!3;DOID:0050686!1.12e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.281577444303333,0.468129052643987,0,0.0797721589953364,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,2.3440060335714,0.523523743973798,45.2938245783881,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:82695250..82695287,- | |||
}} |
Revision as of 16:51, 13 September 2013
Short description: | p@chr18:82695250..82695287, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82695250..82695287, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 8.40e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.40e-09 | 9 |
striated muscle tissue | 8.40e-09 | 9 |
muscle tissue | 8.40e-09 | 9 |
multilaminar epithelium | 8.40e-09 | 9 |
epithelial vesicle | 8.40e-09 | 9 |
musculature | 8.40e-09 | 9 |
somite | 8.40e-09 | 9 |
myotome | 8.40e-09 | 9 |
presomitic mesoderm | 8.40e-09 | 9 |
presumptive segmental plate | 8.40e-09 | 9 |
dermomyotome | 8.40e-09 | 9 |
trunk paraxial mesoderm | 8.40e-09 | 9 |
musculature of body | 5.10e-08 | 10 |
dense mesenchyme tissue | 2.24e-07 | 11 |
paraxial mesoderm | 2.24e-07 | 11 |
presumptive paraxial mesoderm | 2.24e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.99e-24 | 3 |
muscle cancer | 2.99e-24 | 3 |
organ system cancer | 1.08e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.