FFCP PHASE1:Mm9::chr19:30033557..30033562,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:30033557..30033562,+|id=chr19:30033557..30033562,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-44,3;CL:0002202,1.18e-44,3;CL:0000069,1.18e-44,3;CL:0002632,1.18e-44,3;CL:0002368,1.18e-44,3;CL:0000307,1.18e-44,3;CL:0000377,1.18e-44,3;CL:0002610,6.06e-20,3;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.09e-07!17;UBERON:0005181!1.09e-07!17;UBERON:0002224!1.09e-07!17;UBERON:0000915!1.09e-07!17;UBERON:0008947!1.09e-07!17;UBERON:0003258!1.09e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-44,3;UBERON:0001005,1.18e-44,3;UBERON:0007196,1.18e-44,3;UBERON:0001558,1.18e-44,3;UBERON:0004684,6.06e-20,3;UBERON:0002275,6.06e-20,3;UBERON:0000996,9.51e-16,1;UBERON:0005178,1.48e-08,17;UBERON:0005181,1.48e-08,17;UBERON:0002224,1.48e-08,17;UBERON:0000915,1.48e-08,17;UBERON:0008947,1.48e-08,17;UBERON:0003258,1.48e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,1.22885226604995,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,3.030874574157,3.29367825117628,4.54972000513305,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0.642202359951168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92931541171159,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr19:30033557..30033562,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:30033557..30033562,+ | |||
|id=chr19:30033557..30033562,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-44,3;CL:0002202,1.18e-44,3;CL:0000069,1.18e-44,3;CL:0002632,1.18e-44,3;CL:0002368,1.18e-44,3;CL:0000307,1.18e-44,3;CL:0000377,1.18e-44,3;CL:0002610,6.06e-20,3;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.09e-07!17;UBERON:0005181!1.09e-07!17;UBERON:0002224!1.09e-07!17;UBERON:0000915!1.09e-07!17;UBERON:0008947!1.09e-07!17;UBERON:0003258!1.09e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-44,3;UBERON:0001005,1.18e-44,3;UBERON:0007196,1.18e-44,3;UBERON:0001558,1.18e-44,3;UBERON:0004684,6.06e-20,3;UBERON:0002275,6.06e-20,3;UBERON:0000996,9.51e-16,1;UBERON:0005178,1.48e-08,17;UBERON:0005181,1.48e-08,17;UBERON:0002224,1.48e-08,17;UBERON:0000915,1.48e-08,17;UBERON:0008947,1.48e-08,17;UBERON:0003258,1.48e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,1.22885226604995,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,3.030874574157,3.29367825117628,4.54972000513305,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0.642202359951168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92931541171159,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr19:30033557..30033562,+ | |||
}} |
Revision as of 17:20, 13 September 2013
Short description: | p@chr19:30033557..30033562, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:30033557..30033562, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-44 | 3 |
branched duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of lower respiratory tract | 1.18e-44 | 3 |
respiratory epithelial cell | 1.18e-44 | 3 |
tracheal epithelial cell | 1.18e-44 | 3 |
tracheoblast | 1.18e-44 | 3 |
raphe nuclei neuron | 6.06e-20 | 3 |
endo-epithelial cell | 1.32e-09 | 15 |
endodermal cell | 2.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.18e-44 | 3 |
respiratory airway | 1.18e-44 | 3 |
tracheobronchial tree | 1.18e-44 | 3 |
lower respiratory tract | 1.18e-44 | 3 |
raphe nuclei | 6.06e-20 | 3 |
reticular formation | 6.06e-20 | 3 |
vagina | 9.51e-16 | 1 |
thoracic cavity element | 1.48e-08 | 17 |
thoracic segment organ | 1.48e-08 | 17 |
thoracic cavity | 1.48e-08 | 17 |
thoracic segment of trunk | 1.48e-08 | 17 |
respiratory primordium | 1.48e-08 | 17 |
endoderm of foregut | 1.48e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.