FFCP PHASE1:Mm9::chr1:163826477..163826489,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:163826477..163826489,+|id=chr1:163826477..163826489,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,2.23e-10,9|ontology_enrichment_disease=DOID:0060100!9.47e-15!3;DOID:4045!9.47e-15!3;DOID:0050686!1.31e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-29,3;DOID:4045,1.12e-29,3;DOID:0050686,3.13e-15,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.23e-10,9;UBERON:0002036,2.23e-10,9;UBERON:0002385,2.23e-10,9;UBERON:0000486,2.23e-10,9;UBERON:0007503,2.23e-10,9;UBERON:0001015,2.23e-10,9;UBERON:0002329,2.23e-10,9;UBERON:0003082,2.23e-10,9;UBERON:0003059,2.23e-10,9;UBERON:0007282,2.23e-10,9;UBERON:0004290,2.23e-10,9;UBERON:0009618,2.23e-10,9;UBERON:0000383,2.11e-09,10;UBERON:0007524,1.33e-08,11;UBERON:0003077,1.33e-08,11;UBERON:0007285,1.33e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,4.6880120671428,5.23523743973798,99.9993529652724,5.46436387966757,2.42755176515577,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,11.837551712368,0,0,0,0,0,0,0,0,0,8.06484017522023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:163826477..163826489,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:163826477..163826489,+ | |||
|id=chr1:163826477..163826489,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.23e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!9.47e-15!3;DOID:4045!9.47e-15!3;DOID:0050686!1.31e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.12e-29,3;DOID:4045,1.12e-29,3;DOID:0050686,3.13e-15,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.23e-10,9;UBERON:0002036,2.23e-10,9;UBERON:0002385,2.23e-10,9;UBERON:0000486,2.23e-10,9;UBERON:0007503,2.23e-10,9;UBERON:0001015,2.23e-10,9;UBERON:0002329,2.23e-10,9;UBERON:0003082,2.23e-10,9;UBERON:0003059,2.23e-10,9;UBERON:0007282,2.23e-10,9;UBERON:0004290,2.23e-10,9;UBERON:0009618,2.23e-10,9;UBERON:0000383,2.11e-09,10;UBERON:0007524,1.33e-08,11;UBERON:0003077,1.33e-08,11;UBERON:0007285,1.33e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,4.6880120671428,5.23523743973798,99.9993529652724,5.46436387966757,2.42755176515577,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,11.837551712368,0,0,0,0,0,0,0,0,0,8.06484017522023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:163826477..163826489,+ | |||
}} |
Revision as of 19:26, 13 September 2013
Short description: | p@chr1:163826477..163826489, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:163826477..163826489, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.23e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.23e-10 | 9 |
striated muscle tissue | 2.23e-10 | 9 |
muscle tissue | 2.23e-10 | 9 |
multilaminar epithelium | 2.23e-10 | 9 |
epithelial vesicle | 2.23e-10 | 9 |
musculature | 2.23e-10 | 9 |
somite | 2.23e-10 | 9 |
myotome | 2.23e-10 | 9 |
presomitic mesoderm | 2.23e-10 | 9 |
presumptive segmental plate | 2.23e-10 | 9 |
dermomyotome | 2.23e-10 | 9 |
trunk paraxial mesoderm | 2.23e-10 | 9 |
musculature of body | 2.11e-09 | 10 |
dense mesenchyme tissue | 1.33e-08 | 11 |
paraxial mesoderm | 1.33e-08 | 11 |
presumptive paraxial mesoderm | 1.33e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.12e-29 | 3 |
muscle cancer | 1.12e-29 | 3 |
organ system cancer | 3.13e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.