FFCP PHASE1:Mm9::chr1:74044459..74044466,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=442|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:74044459..74044466,-|id=chr1:74044459..74044466,-|ontology_enrichment_celltype=CL:0000107!1.62e-07!9|ontology_enrichment_celltype_v019_2=CL:0002494,1.96e-19,3;CL:0000737,1.96e-19,3;CL:0000746,1.96e-19,3;CL:0000513,1.96e-19,3;CL:0002605,7.29e-13,2;CL:0002604,7.29e-13,2;CL:0000680,5.34e-10,6;CL:0000187,5.34e-10,6;CL:0000056,5.34e-10,6;CL:0000128,1.93e-09,6;CL:0000126,1.93e-09,6;CL:0000127,1.93e-09,6;CL:0000222,1.22e-08,7;CL:0002321,2.15e-07,70;CL:0002453,3.32e-07,8;CL:0000355,8.05e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.42e-07!14;UBERON:0000117!1.42e-07!14;UBERON:0000171!1.42e-07!14;UBERON:0000170!1.42e-07!14;UBERON:0005597!1.42e-07!14;UBERON:0000118!1.42e-07!14;UBERON:0002410!1.62e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.45e-08,3;UBERON:0002342,1.45e-08,3;UBERON:0002005,1.45e-08,3;UBERON:0005428,1.45e-08,3;UBERON:0005062,1.45e-08,3;UBERON:0000025,3.03e-07,114;UBERON:0005157,4.17e-07,20;UBERON:0001134,8.05e-07,9;UBERON:0002036,8.05e-07,9;UBERON:0002385,8.05e-07,9;UBERON:0000486,8.05e-07,9;UBERON:0007503,8.05e-07,9;UBERON:0001015,8.05e-07,9;UBERON:0002329,8.05e-07,9;UBERON:0003082,8.05e-07,9;UBERON:0003059,8.05e-07,9;UBERON:0007282,8.05e-07,9;UBERON:0004290,8.05e-07,9;UBERON:0009618,8.05e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,1.30815093828268,1.31811709640683,1.94429899074283,0.279972843250725,0,0,0,0,6.68874533693462,16.6189395164479,10.8291139378263,0.202316460859598,0,0,0,0.889294796111139,0.449949858640699,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,2.03991400112325,2.69851595818909,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0.136072998302656,0.384341160854549,0,0.517406741478031,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,1.07986979021165,0.697601834251224,0,0.350296027101508,0,0.656669856316381,0.162137619091711,0.292399974850665,0,0.671032093801859,0,0,0,0.264450566663544,0,0.464473343720877,0,0,0.22237804384487,0,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0.387904974335251,0.210407459670956,0.126473074248515,0.442830443938806,0.784993639206874,0.246794327843601,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.964887042726734,0.739012760666419,0,0.325929952884052,0.339490171550376,0.234690248288502,0,0.476087281772027,0.390267295715598,0.630540576424764,1.10732344824387,0.956728611944923,1.80249646187312,1.20879487306127,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0.252470927204373,1.26203287766503,0.390438744296638,1.29254038639679,0.477937595905104,0.891194696329576,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.180938774784468,0,0,0,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.404593039154462,0,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0,0.561142271657738,0,0,0.818462086339379,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr1:74044459..74044466,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=442 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:74044459..74044466,- | |||
|id=chr1:74044459..74044466,- | |||
|ontology_enrichment_celltype=CL:0000107!1.62e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.96e-19,3;CL:0000737,1.96e-19,3;CL:0000746,1.96e-19,3;CL:0000513,1.96e-19,3;CL:0002605,7.29e-13,2;CL:0002604,7.29e-13,2;CL:0000680,5.34e-10,6;CL:0000187,5.34e-10,6;CL:0000056,5.34e-10,6;CL:0000128,1.93e-09,6;CL:0000126,1.93e-09,6;CL:0000127,1.93e-09,6;CL:0000222,1.22e-08,7;CL:0002321,2.15e-07,70;CL:0002453,3.32e-07,8;CL:0000355,8.05e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.42e-07!14;UBERON:0000117!1.42e-07!14;UBERON:0000171!1.42e-07!14;UBERON:0000170!1.42e-07!14;UBERON:0005597!1.42e-07!14;UBERON:0000118!1.42e-07!14;UBERON:0002410!1.62e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.45e-08,3;UBERON:0002342,1.45e-08,3;UBERON:0002005,1.45e-08,3;UBERON:0005428,1.45e-08,3;UBERON:0005062,1.45e-08,3;UBERON:0000025,3.03e-07,114;UBERON:0005157,4.17e-07,20;UBERON:0001134,8.05e-07,9;UBERON:0002036,8.05e-07,9;UBERON:0002385,8.05e-07,9;UBERON:0000486,8.05e-07,9;UBERON:0007503,8.05e-07,9;UBERON:0001015,8.05e-07,9;UBERON:0002329,8.05e-07,9;UBERON:0003082,8.05e-07,9;UBERON:0003059,8.05e-07,9;UBERON:0007282,8.05e-07,9;UBERON:0004290,8.05e-07,9;UBERON:0009618,8.05e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,1.30815093828268,1.31811709640683,1.94429899074283,0.279972843250725,0,0,0,0,6.68874533693462,16.6189395164479,10.8291139378263,0.202316460859598,0,0,0,0.889294796111139,0.449949858640699,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,2.03991400112325,2.69851595818909,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0.136072998302656,0.384341160854549,0,0.517406741478031,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,1.07986979021165,0.697601834251224,0,0.350296027101508,0,0.656669856316381,0.162137619091711,0.292399974850665,0,0.671032093801859,0,0,0,0.264450566663544,0,0.464473343720877,0,0,0.22237804384487,0,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0.387904974335251,0.210407459670956,0.126473074248515,0.442830443938806,0.784993639206874,0.246794327843601,0.592905254174298,0,0,0.224862112384854,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.964887042726734,0.739012760666419,0,0.325929952884052,0.339490171550376,0.234690248288502,0,0.476087281772027,0.390267295715598,0.630540576424764,1.10732344824387,0.956728611944923,1.80249646187312,1.20879487306127,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0.252470927204373,1.26203287766503,0.390438744296638,1.29254038639679,0.477937595905104,0.891194696329576,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.180938774784468,0,0,0,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.404593039154462,0,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.352071715937262,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0,0.561142271657738,0,0,0.818462086339379,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr1:74044459..74044466,- | |||
}} |
Revision as of 20:53, 13 September 2013
Short description: | p@chr1:74044459..74044466, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:74044459..74044466, - |
Coexpression cluster: | MCL_coexpression_mm9:442 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.96e-19 | 3 |
striated muscle cell | 1.96e-19 | 3 |
cardiac muscle cell | 1.96e-19 | 3 |
cardiac muscle myoblast | 1.96e-19 | 3 |
astrocyte of the cerebral cortex | 7.29e-13 | 2 |
astrocyte of the hippocampus | 7.29e-13 | 2 |
muscle precursor cell | 5.34e-10 | 6 |
muscle cell | 5.34e-10 | 6 |
myoblast | 5.34e-10 | 6 |
oligodendrocyte | 1.93e-09 | 6 |
macroglial cell | 1.93e-09 | 6 |
astrocyte | 1.93e-09 | 6 |
mesodermal cell | 1.22e-08 | 7 |
embryonic cell | 2.15e-07 | 70 |
oligodendrocyte precursor cell | 3.32e-07 | 8 |
multi-potent skeletal muscle stem cell | 8.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neural crest-derived structure | 1.45e-08 | 3 |
neural crest | 1.45e-08 | 3 |
enteric nervous system | 1.45e-08 | 3 |
vagal neural crest | 1.45e-08 | 3 |
neural fold | 1.45e-08 | 3 |
tube | 3.03e-07 | 114 |
epithelial fold | 4.17e-07 | 20 |
skeletal muscle tissue | 8.05e-07 | 9 |
striated muscle tissue | 8.05e-07 | 9 |
muscle tissue | 8.05e-07 | 9 |
multilaminar epithelium | 8.05e-07 | 9 |
epithelial vesicle | 8.05e-07 | 9 |
musculature | 8.05e-07 | 9 |
somite | 8.05e-07 | 9 |
myotome | 8.05e-07 | 9 |
presomitic mesoderm | 8.05e-07 | 9 |
presumptive segmental plate | 8.05e-07 | 9 |
dermomyotome | 8.05e-07 | 9 |
trunk paraxial mesoderm | 8.05e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.