Personal tools

FFCP PHASE1:Mm9::chr1:97564097..97564117,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=20452|HGNC=|MCL_coexpression_id=3291|UniProt=Q64692,Q53WR7,Q6PAS1|association_with_transcript=53bp_to_ENSMUST00000043336,NM_001159745,NM_009183,uc007cfa.1,uc011wpu.1_5end|description=CAGE_peak_2_at_St8sia4_5end|id=chr1:97564097..97564117,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,9.42e-07,32;CL:0002032,9.42e-07,32;CL:0000037,9.42e-07,32;CL:0000837,9.42e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.83e-10!48;UBERON:0002390!2.06e-09!45;UBERON:0003061!2.06e-09!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002390,3.64e-10,45;UBERON:0003061,3.64e-10,45;UBERON:0001004,3.39e-08,42;UBERON:0000065,7.51e-08,41;UBERON:0004177,1.74e-07,29;UBERON:0005057,1.74e-07,29|phase1_expression=0.80074423552397,0,0,0,0,0,0,19.6267451631196,9.43284438416167,6.31974221069382,0.34243593645101,0.558405112967355,17.1200729931206,15.5608316305815,5.66286595086627,6.07425802169478,2.09868563438444,17.8236123427404,20.7042794744666,17.8243653755173,2.12608225377674,0.992909512008853,1.56719873483361,2.23989391910769,3.44113921600755,0.57423196411502,0,0,0.190023419456374,1.51218077855958,0.221730510655305,0,0,0,0,0,0,5.85944283031671,10.1573594788094,3.66466620781659,16.4704816648684,12.9778642142105,5.34061388334269,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,15.6037823633695,15.9579671242496,12.7715643674136,0,0,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0.899899717281399,0.988866362566974,4.2628806896766,0,1.15265491596466,3.11068836925433,1.08004750665353,2.94454945891935,2.28520787523043,1.54607978666129,3.06226998037385,0.862609239164127,0.919218786610021,6.60695285996332,2.17068474744819,1.68967186581868,2.1101806036831,0.548925861614458,2.6045668527838,1.67509799400829,3.37657566019008,2.59757021220577,4.12480019663135,4.27115042397309,5.77838282058432,0.681535739998656,0.226714680320357,0.289864488701678,0,0,0,0,0.896053774194671,2.10666630197628,0,0,0,0,0,0,0,0,0,0,2.51204535381932,32.6261733395436,0.742210695324124,0.867426633830679,0,0.461230994512117,0.452167921657868,1.17588707135705,0.502666365318702,0,2.89198713839823,7.07688441559899,1.7794353494215,6.40440403535141,6.78825354389311,0,0.878342391034642,1.04723353406728,1.27728527604296,24.5621005237137,5.39912457894067,22.1102195107133,0.748953197024114,0.915001205637253,8.16753288733619,2.43354048269187,1.27857728665165,1.87009240103604,0.973447578406546,0.509196819251581,6.59356944233493,0.505445516867349,1.05220927943237,1.04096354370163,0.229902104433473,1.62055916824814,2.26057226753573,1.56483948048054,1.15302348256365,1.59292931751539,0,0.215567992932842,0.945530400839096,0.879755620819744,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.995171334092466,1.40442637462647,1.54408744268829,9.37739548005456,0,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,0.154267112887378,1.86027155800326,0.804820204198858,0.934122738937356,0.493679549740441,2.46251196118643,3.56702762001765,4.09359964790931,3.29325172936576,2.54992195644706,1.05144974282064,3.70456604565424,0.991256348951394,0.793351699990633,1.06644125267617,0.928946687441754,1.15980715189884,0.403367049246685,1.55664630691409,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,1.1937388322469,0.779856348476481,1.79763881730844,1.08069024937347,1.59313018603494,0.189667900953082,0.685491075658373,1.1270773567308,0.610953983535943,1.16371492300575,0.210407459670956,0.569128834118316,0.295220295959204,0.627994911365499,0.246794327843601,0,0.667380422864376,0.589676985339609,0.224862112384854,1.42002084971952,1.20588579876208,1.78238096246994,2.30156909960649,2.2698931748505,0.823684239564244,0,1.48856379067401,1.5601883655728,1.01031551178845,0.358794827043824,0,8.49864674766381,1.70542270593436,1.62964976442026,2.37643120085263,2.81628297946203,3.35012514883632,2.14239276797412,2.92700471786698,6.30540576424764,5.97954662051692,10.2051051940792,5.89907932976657,9.49767400262426,7.5217510462386,10.5553898757491,8.70249094109935,1.96705709207614,2.75936746304733,1.9266070798535,1.52375192569864,0,2.52470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,2.57057053137446,0.709700426041343,0.534196811001766,1.14020871547503,1.64970122972535,5.30980553359851,1.94224508923985,0.604647113929502,0.754420319023592,0.885905678642318,2.76691633149535,2.06742634534577,1.81766864738753,0.712994756769443,1.26414703174326,0,1.03135543248187,0.340439605753788,1.08036656418786,0.129358683782755,0.857348140126369,0.354680467284547,0.356737635204141,0.822745103010605,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,1.15420377059036,0.807322133479528,1.26657142349127,0.596861720015682,0.328281799490123,2.04036585640896,1.8542530201051,9.56876932467975,5.57244543500701,6.85219751267933,3.95573759709851,5.05768642567793,5.49067615695654,14.4481665494777,13.2953879707475,13.2671974852247,0.954670618015114,1.26534397432454,1.01659733563424,1.08005340821801,0.627264888043406,1.09181281873089,1.48350781023303,1.07449492442937,1.30877970992015,0.648074866458964,3.72803587852155,0,0.448549638131936,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.58678619322877,0.39061315453185,0.209718688851422,0.483168241652012,0.576060012515731,5.37218905067903,0.608175645870493,2.97861775777999,3.11809975146708,2.50637373934474,3.77494574084403,5.88957702647847,6.05527061415767,7.87538309595551,5.94413091908999,7.4611377001262,5.84747284438514,8.85148943091031,10.2851673919781,1.58711268530648,0,0.0897138566094757,0,1.54551675225752,2.43987218086537,1.28206136987086,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,1.14579102687879,2.92150409984269,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,1.59609949360412,1.36586884603307,1.45864030240976,0.419226325255965,0.551530525350042,2.00022055021454,1.85431551515005,2.24643446714271,2.02157769411038,1.2673964994512,2.64076877940507,2.71560371662659,2.56100609619477,2.87177344778066,0.952587382566147,1.62238056322798,3.27945674788299,2.88460130562315,1.03039244094078,1.02860775715625,2.30718548007139,1.90748951957857,2.76158191601424,1.69396884747595,2.5384382367503,1.28049581010941,1.05227884575137,1.7654534799962,0.561142271657738,1.89816028998679,2.85662998889134,1.22769312950907,2.63392630016142,1.92906610981141,1.49886346762768,1.40358965067245,2.36358159453128,1.72159498861959,1.98532277207564,3.47801753430632|short_description=p2@St8sia4}}
|EntrezGene=20452
|HGNC=
|MCL_coexpression_id=3291
|UniProt=Q64692,Q53WR7,Q6PAS1
|association_with_transcript=53bp_to_ENSMUST00000043336,NM_001159745,NM_009183,uc007cfa.1,uc011wpu.1_5end
|description=CAGE_peak_2_at_St8sia4_5end
|id=chr1:97564097..97564117,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,9.42e-07,32;CL:0002032,9.42e-07,32;CL:0000037,9.42e-07,32;CL:0000837,9.42e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.83e-10!48;UBERON:0002390!2.06e-09!45;UBERON:0003061!2.06e-09!45
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002390,3.64e-10,45;UBERON:0003061,3.64e-10,45;UBERON:0001004,3.39e-08,42;UBERON:0000065,7.51e-08,41;UBERON:0004177,1.74e-07,29;UBERON:0005057,1.74e-07,29
|phase1_expression=0.80074423552397,0,0,0,0,0,0,19.6267451631196,9.43284438416167,6.31974221069382,0.34243593645101,0.558405112967355,17.1200729931206,15.5608316305815,5.66286595086627,6.07425802169478,2.09868563438444,17.8236123427404,20.7042794744666,17.8243653755173,2.12608225377674,0.992909512008853,1.56719873483361,2.23989391910769,3.44113921600755,0.57423196411502,0,0,0.190023419456374,1.51218077855958,0.221730510655305,0,0,0,0,0,0,5.85944283031671,10.1573594788094,3.66466620781659,16.4704816648684,12.9778642142105,5.34061388334269,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,15.6037823633695,15.9579671242496,12.7715643674136,0,0,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0.899899717281399,0.988866362566974,4.2628806896766,0,1.15265491596466,3.11068836925433,1.08004750665353,2.94454945891935,2.28520787523043,1.54607978666129,3.06226998037385,0.862609239164127,0.919218786610021,6.60695285996332,2.17068474744819,1.68967186581868,2.1101806036831,0.548925861614458,2.6045668527838,1.67509799400829,3.37657566019008,2.59757021220577,4.12480019663135,4.27115042397309,5.77838282058432,0.681535739998656,0.226714680320357,0.289864488701678,0,0,0,0,0.896053774194671,2.10666630197628,0,0,0,0,0,0,0,0,0,0,2.51204535381932,32.6261733395436,0.742210695324124,0.867426633830679,0,0.461230994512117,0.452167921657868,1.17588707135705,0.502666365318702,0,2.89198713839823,7.07688441559899,1.7794353494215,6.40440403535141,6.78825354389311,0,0.878342391034642,1.04723353406728,1.27728527604296,24.5621005237137,5.39912457894067,22.1102195107133,0.748953197024114,0.915001205637253,8.16753288733619,2.43354048269187,1.27857728665165,1.87009240103604,0.973447578406546,0.509196819251581,6.59356944233493,0.505445516867349,1.05220927943237,1.04096354370163,0.229902104433473,1.62055916824814,2.26057226753573,1.56483948048054,1.15302348256365,1.59292931751539,0,0.215567992932842,0.945530400839096,0.879755620819744,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.995171334092466,1.40442637462647,1.54408744268829,9.37739548005456,0,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,0.154267112887378,1.86027155800326,0.804820204198858,0.934122738937356,0.493679549740441,2.46251196118643,3.56702762001765,4.09359964790931,3.29325172936576,2.54992195644706,1.05144974282064,3.70456604565424,0.991256348951394,0.793351699990633,1.06644125267617,0.928946687441754,1.15980715189884,0.403367049246685,1.55664630691409,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,1.1937388322469,0.779856348476481,1.79763881730844,1.08069024937347,1.59313018603494,0.189667900953082,0.685491075658373,1.1270773567308,0.610953983535943,1.16371492300575,0.210407459670956,0.569128834118316,0.295220295959204,0.627994911365499,0.246794327843601,0,0.667380422864376,0.589676985339609,0.224862112384854,1.42002084971952,1.20588579876208,1.78238096246994,2.30156909960649,2.2698931748505,0.823684239564244,0,1.48856379067401,1.5601883655728,1.01031551178845,0.358794827043824,0,8.49864674766381,1.70542270593436,1.62964976442026,2.37643120085263,2.81628297946203,3.35012514883632,2.14239276797412,2.92700471786698,6.30540576424764,5.97954662051692,10.2051051940792,5.89907932976657,9.49767400262426,7.5217510462386,10.5553898757491,8.70249094109935,1.96705709207614,2.75936746304733,1.9266070798535,1.52375192569864,0,2.52470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,2.57057053137446,0.709700426041343,0.534196811001766,1.14020871547503,1.64970122972535,5.30980553359851,1.94224508923985,0.604647113929502,0.754420319023592,0.885905678642318,2.76691633149535,2.06742634534577,1.81766864738753,0.712994756769443,1.26414703174326,0,1.03135543248187,0.340439605753788,1.08036656418786,0.129358683782755,0.857348140126369,0.354680467284547,0.356737635204141,0.822745103010605,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,1.15420377059036,0.807322133479528,1.26657142349127,0.596861720015682,0.328281799490123,2.04036585640896,1.8542530201051,9.56876932467975,5.57244543500701,6.85219751267933,3.95573759709851,5.05768642567793,5.49067615695654,14.4481665494777,13.2953879707475,13.2671974852247,0.954670618015114,1.26534397432454,1.01659733563424,1.08005340821801,0.627264888043406,1.09181281873089,1.48350781023303,1.07449492442937,1.30877970992015,0.648074866458964,3.72803587852155,0,0.448549638131936,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.58678619322877,0.39061315453185,0.209718688851422,0.483168241652012,0.576060012515731,5.37218905067903,0.608175645870493,2.97861775777999,3.11809975146708,2.50637373934474,3.77494574084403,5.88957702647847,6.05527061415767,7.87538309595551,5.94413091908999,7.4611377001262,5.84747284438514,8.85148943091031,10.2851673919781,1.58711268530648,0,0.0897138566094757,0,1.54551675225752,2.43987218086537,1.28206136987086,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,1.14579102687879,2.92150409984269,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,1.59609949360412,1.36586884603307,1.45864030240976,0.419226325255965,0.551530525350042,2.00022055021454,1.85431551515005,2.24643446714271,2.02157769411038,1.2673964994512,2.64076877940507,2.71560371662659,2.56100609619477,2.87177344778066,0.952587382566147,1.62238056322798,3.27945674788299,2.88460130562315,1.03039244094078,1.02860775715625,2.30718548007139,1.90748951957857,2.76158191601424,1.69396884747595,2.5384382367503,1.28049581010941,1.05227884575137,1.7654534799962,0.561142271657738,1.89816028998679,2.85662998889134,1.22769312950907,2.63392630016142,1.92906610981141,1.49886346762768,1.40358965067245,2.36358159453128,1.72159498861959,1.98532277207564,3.47801753430632
|short_description=p2@St8sia4
}}

Revision as of 21:22, 13 September 2013

Short description:p2@St8sia4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_St8sia4_5end
Coexpression cluster:MCL_coexpression_mm9:3291
Association with transcript: 53bp_to_ENSMUST00000043336, NM_001159745, NM_009183, uc007cfa.1, uc011wpu.1_5end
EntrezGene:St8sia4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@St8sia4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.12
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.82
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.77
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H932.63
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.11
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.38
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E56.31
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C79.50
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.27
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C47.88
thymus, neonate N07.CNhs11211.713-19D35.94
thymus, neonate N10.CNhs11194.748-24E47.46
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G78.85
thymus, neonate N30.CNhs11132.1393-42G210.29
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.55e-1148
immune system2.55e-1148
hematopoietic system3.64e-1045
blood island3.64e-1045
respiratory system3.39e-0842
respiratory tract7.51e-0841
hemopoietic organ1.74e-0729
immune organ1.74e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:97564097..97564117,-&oldid=2975423"