FFCP PHASE1:Hg19::chr7:117232534..117232548,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1080|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1884|TSSclassifier=S|UniProt=Q99904|association_with_transcript=36bp_to_S82430_5end|coexpression_cluster_id=C46|description=CAGE_peak_6_at_CFTR_5end|id=chr7:117232534..117232548,+|ontology_enrichment_celltype=CL:0002563!6.42e-23!4;CL:0002253!2.07e-12!2;CL:0002097!2.59e-12!2;CL:0002251!3.92e-10!21;CL:0002178!9.66e-09!3;CL:0000174!1.21e-08!3;CL:0002076!1.39e-08!43;CL:0002231!1.40e-08!3|ontology_enrichment_celltype_v019=CL:0002178;4.09e-23;3|ontology_enrichment_celltype_v019_2=CL:0002178,4.09e-23,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3493!1.85e-12!2;DOID:0060058!8.84e-10!10;DOID:3119!2.68e-07!14|ontology_enrichment_disease_v019=DOID:3493;7.05e-34;2!DOID:0060058;6.13e-08;10|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2;DOID:0060058,6.13e-08,10|ontology_enrichment_uberon=UBERON:0001242!6.42e-23!4;UBERON:0001262!6.42e-23!4;UBERON:0004786!6.42e-23!4;UBERON:0004808!6.42e-23!4;UBERON:0001277!6.42e-23!4;UBERON:0003350!1.48e-18!5;UBERON:0000485!9.23e-11!9;UBERON:0002369!1.21e-08!3;UBERON:0001235!1.21e-08!3;UBERON:0006858!1.21e-08!3;UBERON:0000344!2.65e-08!12;UBERON:0000060!2.65e-08!12;UBERON:0001052!7.70e-07!4|ontology_enrichment_uberon_v019=UBERON:0000945;1.83e-14;5!UBERON:0010039;1.83e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4888508843433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@CFTR}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1884 | |||
|TSSclassifier=S | |||
|UniProt=Q99904 | |||
|association_with_transcript=36bp_to_S82430_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_6_at_CFTR_5end | |||
|id=chr7:117232534..117232548,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.42e-23!4;CL:0002253!2.07e-12!2;CL:0002097!2.59e-12!2;CL:0002251!3.92e-10!21;CL:0002178!9.66e-09!3;CL:0000174!1.21e-08!3;CL:0002076!1.39e-08!43;CL:0002231!1.40e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;4.09e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.85e-12!2;DOID:0060058!8.84e-10!10;DOID:3119!2.68e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;7.05e-34;2!DOID:0060058;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2;DOID:0060058,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001242!6.42e-23!4;UBERON:0001262!6.42e-23!4;UBERON:0004786!6.42e-23!4;UBERON:0004808!6.42e-23!4;UBERON:0001277!6.42e-23!4;UBERON:0003350!1.48e-18!5;UBERON:0000485!9.23e-11!9;UBERON:0002369!1.21e-08!3;UBERON:0001235!1.21e-08!3;UBERON:0006858!1.21e-08!3;UBERON:0000344!2.65e-08!12;UBERON:0000060!2.65e-08!12;UBERON:0001052!7.70e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.83e-14;5!UBERON:0010039;1.83e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29755719297581,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4888508843433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CFTR | |||
}} |
Revision as of 22:53, 13 September 2013
Short description: | p6@CFTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CFTR_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 36bp_to_S82430_5end |
EntrezGene: | CFTR |
HGNC: | 1884 |
UniProt: | Q99904 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.05e-34 | 2 |
lymphoma | 6.13e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.