FFCP PHASE1:Hg19::chr7:137139686..137139717,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9162|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2855|TSSclassifier=S|UniProt=|association_with_transcript=-67bp_to_ENST00000477835_5end|coexpression_cluster_id=C4656|description=CAGE_peak_4_at_DGKI_5end|id=chr7:137139686..137139717,-|ontology_enrichment_celltype=CL:0000055!3.97e-17!180;CL:0000057!4.36e-13!75;CL:0000192!2.99e-08!42;CL:0000514!2.99e-08!42;CL:0000680!2.12e-07!57;CL:0000056!2.12e-07!57;CL:0000355!2.12e-07!57|ontology_enrichment_celltype_v019=CL:0002549;1.29e-10;2!CL:0002548;1.62e-07;6!CL:0000048;2.59e-07;58!CL:0002494;4.36e-07;16|ontology_enrichment_celltype_v019_2=CL:0002549,1.80e-10,2;CL:0002548,2.52e-07,6;CL:0002494,5.34e-07,16|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!2.46e-09!14|ontology_enrichment_disease_v019=DOID:2394;2.17e-15;14!DOID:1909;3.21e-11;2!DOID:193;3.97e-09;29!DOID:120;1.54e-07;27|ontology_enrichment_disease_v019_2=DOID:2394,2.64e-15,14;DOID:1909,3.14e-11,2;DOID:193,4.42e-09,29;DOID:120,1.69e-07,27|ontology_enrichment_uberon=UBERON:0000948!4.13e-08!24;UBERON:0005498!4.13e-08!24;UBERON:0004140!4.13e-08!24;UBERON:0009881!4.13e-08!24;UBERON:0004141!4.13e-08!24;UBERON:0003084!4.13e-08!24;UBERON:0007005!4.13e-08!24;UBERON:0004139!4.13e-08!24;UBERON:0004291!4.13e-08!24;UBERON:0004872!2.07e-07!84;UBERON:0002385!3.03e-07!63;UBERON:0001015!3.03e-07!63;UBERON:0000383!3.03e-07!63|ontology_enrichment_uberon_v019=UBERON:0000948;2.02e-12;22!UBERON:0007100;8.83e-11;25!UBERON:0005629;1.29e-10;2!UBERON:0005358;1.29e-10;2!UBERON:0001886;1.29e-10;2!UBERON:0004086;1.29e-10;2!UBERON:0005282;1.29e-10;2!UBERON:0005281;1.29e-10;2!UBERON:0002118;3.26e-09;5!UBERON:0000992;7.78e-09;13!UBERON:0000991;1.91e-07;21!UBERON:0004151;5.54e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.92e-14,24;UBERON:0005498,2.92e-14,24;UBERON:0004140,2.92e-14,24;UBERON:0009881,2.92e-14,24;UBERON:0004141,2.92e-14,24;UBERON:0003084,2.92e-14,24;UBERON:0007005,2.92e-14,24;UBERON:0004139,2.92e-14,24;UBERON:0004291,2.92e-14,24;UBERON:0007100,1.67e-12,27;UBERON:0005629,1.80e-10,2;UBERON:0005358,1.80e-10,2;UBERON:0001886,1.80e-10,2;UBERON:0004086,1.80e-10,2;UBERON:0005282,1.80e-10,2;UBERON:0005281,1.80e-10,2;UBERON:0002118,3.92e-09,5;UBERON:0000992,8.56e-09,13;UBERON:0000991,1.84e-07,21;UBERON:0009196,1.84e-07,21;UBERON:0009117,1.84e-07,21;UBERON:0005564,1.84e-07,21;UBERON:0004176,4.27e-07,22;UBERON:0004151,4.91e-07,3|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.85372853138506,0.573673241497627,0.354668382198357,1.12135520028461,1.06748995729705,0.24666754841716,2.17847724779836,0.404132016209064,0,5.90293967815232,1.15235184896,0,0,0,0,0,0,0,0,0,0,2.37600571456411,1.23633464639278,0,0,0,0,0.277064115484183,0.438977620880838,0,0.901428353439581,2.38207584636044,0.358779271377724,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0.675105328965065,0.779496041289589,0.252433774244115,0.276149695926898,0,0.710019185033229,1.41052937518696,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0.444485260045183,0.381988425558278,0,0,0.925447434329912,0.300343057843917,0,0,0,0.1466765716419,0.517086863031111,0,0,10.6375246633948,3.12022310734098,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50473049863859,2.27407504055985,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0.61384789315225,0.841980283299221,0.384417447767103,3.58195074346692,0.160853921143607,0,0.616838775210622,0.710246901252508,0.739144404124282,0.519254429183621,0,0,0,0,0.574072240823034,0.910455840033585,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.62962469366128,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.286249773483982,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.848432591722276,0,0,0,0,0,0.655894752046633,0.811641507850816,0.6196469961995,0.281695602532241,0.143411352204052,0,0.7133421029625,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2855 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-67bp_to_ENST00000477835_5end | |||
|coexpression_cluster_id=C4656 | |||
|description=CAGE_peak_4_at_DGKI_5end | |||
|id=chr7:137139686..137139717,- | |||
|ontology_enrichment_celltype=CL:0000055!3.97e-17!180;CL:0000057!4.36e-13!75;CL:0000192!2.99e-08!42;CL:0000514!2.99e-08!42;CL:0000680!2.12e-07!57;CL:0000056!2.12e-07!57;CL:0000355!2.12e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002549;1.29e-10;2!CL:0002548;1.62e-07;6!CL:0000048;2.59e-07;58!CL:0002494;4.36e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.80e-10,2;CL:0002548,2.52e-07,6;CL:0002494,5.34e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.46e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.17e-15;14!DOID:1909;3.21e-11;2!DOID:193;3.97e-09;29!DOID:120;1.54e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.64e-15,14;DOID:1909,3.14e-11,2;DOID:193,4.42e-09,29;DOID:120,1.69e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000948!4.13e-08!24;UBERON:0005498!4.13e-08!24;UBERON:0004140!4.13e-08!24;UBERON:0009881!4.13e-08!24;UBERON:0004141!4.13e-08!24;UBERON:0003084!4.13e-08!24;UBERON:0007005!4.13e-08!24;UBERON:0004139!4.13e-08!24;UBERON:0004291!4.13e-08!24;UBERON:0004872!2.07e-07!84;UBERON:0002385!3.03e-07!63;UBERON:0001015!3.03e-07!63;UBERON:0000383!3.03e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.02e-12;22!UBERON:0007100;8.83e-11;25!UBERON:0005629;1.29e-10;2!UBERON:0005358;1.29e-10;2!UBERON:0001886;1.29e-10;2!UBERON:0004086;1.29e-10;2!UBERON:0005282;1.29e-10;2!UBERON:0005281;1.29e-10;2!UBERON:0002118;3.26e-09;5!UBERON:0000992;7.78e-09;13!UBERON:0000991;1.91e-07;21!UBERON:0004151;5.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.92e-14,24;UBERON:0005498,2.92e-14,24;UBERON:0004140,2.92e-14,24;UBERON:0009881,2.92e-14,24;UBERON:0004141,2.92e-14,24;UBERON:0003084,2.92e-14,24;UBERON:0007005,2.92e-14,24;UBERON:0004139,2.92e-14,24;UBERON:0004291,2.92e-14,24;UBERON:0007100,1.67e-12,27;UBERON:0005629,1.80e-10,2;UBERON:0005358,1.80e-10,2;UBERON:0001886,1.80e-10,2;UBERON:0004086,1.80e-10,2;UBERON:0005282,1.80e-10,2;UBERON:0005281,1.80e-10,2;UBERON:0002118,3.92e-09,5;UBERON:0000992,8.56e-09,13;UBERON:0000991,1.84e-07,21;UBERON:0009196,1.84e-07,21;UBERON:0009117,1.84e-07,21;UBERON:0005564,1.84e-07,21;UBERON:0004176,4.27e-07,22;UBERON:0004151,4.91e-07,3 | |||
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|short_description=p4@DGKI | |||
}} |
Revision as of 23:26, 13 September 2013
Short description: | p4@DGKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DGKI_5end |
Coexpression cluster: | C4656_Mesenchymal_melanoma_heart_teratocarcinoma_Fibroblast_mesenchymal_Preadipocyte |
Association with transcript: | -67bp_to_ENST00000477835_5end |
EntrezGene: | DGKI |
HGNC: | 2855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.80e-10 | 2 |
cardiac fibroblast | 2.52e-07 | 6 |
cardiocyte | 5.34e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
heart | 2.92e-14 | 24 |
primitive heart tube | 2.92e-14 | 24 |
primary heart field | 2.92e-14 | 24 |
anterior lateral plate mesoderm | 2.92e-14 | 24 |
heart tube | 2.92e-14 | 24 |
heart primordium | 2.92e-14 | 24 |
cardiac mesoderm | 2.92e-14 | 24 |
cardiogenic plate | 2.92e-14 | 24 |
heart rudiment | 2.92e-14 | 24 |
primary circulatory organ | 1.67e-12 | 27 |
vascular plexus | 1.80e-10 | 2 |
ventricle of nervous system | 1.80e-10 | 2 |
choroid plexus | 1.80e-10 | 2 |
brain ventricle | 1.80e-10 | 2 |
ventricular system of brain | 1.80e-10 | 2 |
ventricular system of central nervous system | 1.80e-10 | 2 |
right ovary | 3.92e-09 | 5 |
female gonad | 8.56e-09 | 13 |
gonad | 1.84e-07 | 21 |
indifferent external genitalia | 1.84e-07 | 21 |
indifferent gonad | 1.84e-07 | 21 |
gonad primordium | 1.84e-07 | 21 |
external genitalia | 4.27e-07 | 22 |
cardiac chamber | 4.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.64e-15 | 14 |
melanoma | 3.14e-11 | 2 |
reproductive organ cancer | 4.42e-09 | 29 |
female reproductive organ cancer | 1.69e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.