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FFCP PHASE1:Hg19::chr7:139876907..139877006,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=100134229|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-54bp_to_NR_024451,uc011kqy.1_5end|coexpression_cluster_id=C14|description=CAGE_peak_1_at_LOC100134229_5end|id=chr7:139876907..139877006,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!8.47e-08!15;UBERON:0000179!8.47e-08!15;UBERON:0000463!8.47e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;6.21e-09;15!UBERON:0000179;6.21e-09;15!UBERON:0000463;6.21e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.78e-09,15;UBERON:0000179,5.78e-09,15;UBERON:0000463,5.78e-09,15|phase1_expression=2.72517568905835,3.42560838225573,2.53717927372748,5.00366491765652,3.5756887554183,1.74467704820074,2.53299878168311,2.52687949370732,4.96252693579693,0.491467873003018,0,0.655324116390517,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,1.72369481307503,1.02000345622126,3.44800193625897,0.572471974262113,0,0,0,0,0,0.786728553697808,0,2.47705797305722,0.919421224478927,1.204823675113,2.9580320813343,0.154934401160603,0.142169232487422,0,0.553995408531877,2.80762226458198,2.17010870715852,0.671746422719773,1.6194683300949,0.77272670290256,1.30858414901608,0.377875943688809,0.727752183563449,1.16214518452842,1.23350366406548,1.23882548358041,1.7261543539329,1.0246428261164,1.18241114944293,2.06847408441971,0.645484683583826,2.70852973188684,1.69418105588344,0.818718450173537,1.12361742222542,2.44867113896722,1.28371610830437,3.83602275479425,0.989553900560148,1.79517291859469,1.70489900213078,2.90209238628584,4.53908179752912,1.86846674698672,1.00499466102697,3.12889751052121,0.65156653411535,1.81619850790011,2.94622108790052,1.89877432464531,0.633765858935825,2.76385589954557,1.46761051855863,0.673971786878971,0.750884464207532,1.6072558669708,1.42506371870624,0.79566670879636,0.91332076882317,5.27988733383968,1.09227722252426,3.55803701545422,0.853460445133014,4.00395987036012,2.29900975981793,4.62731410949403,2.86216126360609,1.70763890732835,1.17447437874188,0.764546456250458,0,0.560508562981536,0.263384084775077,1.7703879310245,2.35806457649499,0.822405995998037,2.00623794468814,0.977766799900771,2.36723902867367,0,2.1167986808183,2.3568472597987,1.10766947291811,1.62482318259009,4.22701355094728,4.68213651215562,0.493313713811028,0.276350017785848,0,1.77943875794473,3.74557159325598,2.09071047609954,1.13309342697566,1.53288197440768,1.71813722741315,1.26509846009751,1.91139248594458,3.25541726928209,0,1.6563263098555,2.68771883424279,1.24930726552346,2.8413270245282,0.821127996921047,2.01606743224732,0.802320587350522,1.44824403882799,0,0,1.40648818027883,1.44575660953827,2.00535164254356,1.44846518960824,3.1811437882044,4.37971383272372,0.472674085820339,0.221729397462564,0.527008714158756,0.851363990735132,3.64295288292542,1.48313777113772,0.324547393654683,0.870648686496336,0.531831842075461,0.476981248610684,0.571994910780128,0.371457501329565,0.39752481473341,0,0.694281003215189,1.13061588384802,1.67799774483962,1.10047216776027,0.626984899610432,0,0.35576626268671,0.66944122552934,0.805658634218294,1.52054421143703,0.732186172644509,0,0,0.17859945656816,0.898117490504679,0.112611480483322,0,0,0.549605231791222,1.31780417436063,3.87780264148325,3.92484646928281,0.496971951695318,1.51956613997496,0.926864265692532,1.14734648299525,1.06400514659507,2.24271040056923,0,0.98667019366864,0.622422070799533,0.808264032418128,0,0.756787138224657,0.576175924479999,0.468642863667593,0.936480230490962,0,0.747243402759005,0.704606991862589,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0.718618141816238,0,0.250237039743928,0,0,0.612975591598039,1.50238058906597,0.567160915800105,0.358779271377724,1.06778694409284,0.635795703478686,0.300091096084402,0.618315175430633,0.515281080091258,0.744467425326359,0.337552664482532,2.43592512902997,0,1.10459878370759,0.484938170456436,0,0.503760491138201,0.67824236924195,1.15956511897978,0.545492241181669,0.286804595389004,1.58565817968474,0.662648841607426,1.51052125730374,1.0366105501537,0.504641701751257,0.72995471815166,0,0.643240938192885,1.38134921352481,0.928735856063958,1.44375896333917,0.236613600079688,0.842923450390509,0.241011029883482,0.441175890929576,0,0.71181185733329,0.269662616320329,0,0.38474715694639,0.738155454624648,0,2.4694440679884,0,1.26755034821831,0.982827216677626,0,1.7658523976586,1.22988438543114,0.343135620597051,0.878002283269004,1.1240175325762,2.51322431029077,0.555530670951178,1.3032332212413,1.03993478527958,0,0.231860809950154,1.6437217193015,0.577465791044295,0,1.14152491340759,2.37061319387782,0.858486162094873,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|DPIdataset=robustDPI
|EntrezGene=100134229
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA
|HGNC=
|TSSclassifier=S
|UniProt=
|association_with_transcript=-54bp_to_NR_024451,uc011kqy.1_5end
|coexpression_cluster_id=C14
|description=CAGE_peak_1_at_LOC100134229_5end
|id=chr7:139876907..139877006,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000178!8.47e-08!15;UBERON:0000179!8.47e-08!15;UBERON:0000463!8.47e-08!15
|ontology_enrichment_uberon_v019=UBERON:0000178;6.21e-09;15!UBERON:0000179;6.21e-09;15!UBERON:0000463;6.21e-09;15
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.78e-09,15;UBERON:0000179,5.78e-09,15;UBERON:0000463,5.78e-09,15
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|short_description=p1@LOC100134229
}}

Revision as of 23:32, 13 September 2013

Short description:p1@LOC100134229
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_LOC100134229_5end
Coexpression cluster:C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen
Association with transcript: -54bp_to_NR_024451, uc011kqy.1_5end
EntrezGene:LOC100134229
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.