FFCP PHASE1:Mm9::chr2:4840087..4840108,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16922|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=-17bp_to_ENSMUST00000146933_5end|description=CAGE_peak_1_at_Phyh_5end|id=chr2:4840087..4840108,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!3.13e-11!23;UBERON:0009856!3.13e-11!23;UBERON:0002107!8.93e-11!22;UBERON:0007499!8.93e-11!22;UBERON:0006925!8.93e-11!22;UBERON:0009497!8.93e-11!22;UBERON:0000015!8.93e-11!22;UBERON:0002423!8.93e-11!22;UBERON:0006235!8.93e-11!22;UBERON:0008835!8.93e-11!22;UBERON:0003894!8.93e-11!22;UBERON:0004161!8.93e-11!22;UBERON:0008836!8.93e-11!22;UBERON:0002365!1.15e-09!25;UBERON:0002330!1.15e-09!25;UBERON:0003914!1.56e-09!47;UBERON:0007023!5.34e-07!51;UBERON:0005256!6.04e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.13e-11,23;UBERON:0009856,3.13e-11,23;UBERON:0002107,8.93e-11,22;UBERON:0007499,8.93e-11,22;UBERON:0006925,8.93e-11,22;UBERON:0009497,8.93e-11,22;UBERON:0000015,8.93e-11,22;UBERON:0002423,8.93e-11,22;UBERON:0006235,8.93e-11,22;UBERON:0008835,8.93e-11,22;UBERON:0003894,8.93e-11,22;UBERON:0004161,8.93e-11,22;UBERON:0008836,8.93e-11,22;UBERON:0000160,1.02e-09,31;UBERON:0002365,1.15e-09,25;UBERON:0002330,1.15e-09,25;UBERON:0003914,1.56e-09,47;UBERON:0003104,1.20e-07,61;UBERON:0009142,1.20e-07,61;UBERON:0005256,3.34e-07,45;UBERON:0005409,4.83e-07,47;UBERON:0007023,5.34e-07,51|phase1_expression=19.0577128054705,155.643031807155,154.244742153053,155.164140400404,191.843064569451,64.9692782299013,80.5963610054564,39.7699836200055,1.97104211012333,3.97909694747389,2.39705155515707,5.18519033469687,12.6688540149092,37.6781934425879,6.66219523631325,8.50396123037269,4.19737126876888,28.8647881302787,26.4630856859076,19.9463136345074,80.7911256435163,2.87943758482567,6.26879493933445,191.190945238121,196.603753874565,202.703883332602,194.273660267743,163.54266560859,255.20145232991,171.632518366513,118.625823200588,1.27006134691926,0,0,57.1926207107524,72.9770093123781,50.2256616405428,53.9905803650611,60.9441568728564,43.9759944937991,94.1170380849623,98.3585498340162,77.1961461319534,20.5211813300191,23.0125633868298,22.3927037637251,7.82391344348039,25.5089432965122,46.1340983742391,51.5239232546851,20.1580447140522,25.8754615856949,17.4493910300046,10.8804321301702,9.41062637598899,4.63066984864705,14.0401385569991,15.4701627683233,10.3181395038395,12.1667925232568,10.775133859605,3.38844532069132,8.89294796111139,17.0980946283466,12.8552627133707,12.7886420690298,13.1824048628098,26.5110630671873,4.76972216618997,3.91517221161903,6.94072372459561,20.5668708770739,23.412065340871,6.1245399607477,5.07980996396653,2.75765635983006,39.6417171597799,41.6260722157712,43.3170423782607,9.49581271657396,10.6125666578795,9.37644067002168,51.0904888172527,45.0210088025344,40.6443339086315,27.6950870345248,23.0642122894547,12.3023634244698,2.49896437999507,10.3533037346296,28.9864488701678,3243.79801621983,1701.9682482705,2820.48887949923,3711.52289646109,4166.65005000522,717.249653612857,21.9855116125695,23.1209544096553,26.1471285137652,45.0698943285378,17.9657068380045,7.64415719119937,7.11066703153331,4.76280290224671,5.06719730950197,4.54972000513305,892.232836124735,38.0638688961342,84.4635771278853,14.7462527751215,26.4884966131563,37.5903260527375,34.2140394054453,48.9169021684532,89.2232798440696,212.834867219296,405.167398089592,38.9228642857945,28.1474318908492,49.9101831720489,35.8807687320064,210.622690176478,48.6016123039168,32.8831329697124,350.231622690979,6.58983184782562,13.197860081855,9.40319680340679,66.5070438957413,46.6650614874999,8.41884159156192,48.4969853336451,32.7315785382823,63.7909296797849,38.9379031362618,11.3041693873851,31.3505565937434,28.5576717030052,170.037019556271,17.1758984710769,13.3343220571414,13.1445354757905,17.4817588689429,10.0013653752452,11.1458936647819,11.9001190190856,81.750265153529,15.5208954911646,15.5066985737612,14.4279921814438,13.8093311429372,16.4047877043103,16.0195996600197,15.6394423670037,11.3449532086541,20.3641824320838,22.3892679189802,17.6181369625267,27.7548535197573,32.5991223373724,32.9513572473657,33.8544971886851,49.9781148638406,52.7593526074834,78.3639393808874,83.164754433882,90.1428443074549,93.1408750510299,165.480803791728,234.775272444798,320.324172448903,356.329837117375,369.872890103585,47.5255283754928,9.36431972651488,1540.74278505345,459.879535427904,12.1574302805083,17.4177503895329,23.5827454219431,46.5888941879921,68.4924375042201,103.863191857457,314.612767804011,209.332371454218,138.485700048949,161.950568241497,115.2237754874,319.080890072249,327.016869460412,495.065205310357,11.7594098590911,14.6238096140453,23.6686244913469,33.8061204223222,47.7123118432359,69.785140790867,92.1356345900429,245.475676090078,316.666434056053,404.495903335662,3084.58958484178,25.0267658574141,36.1668551008294,53.5171827475952,84.9983908617827,153.388673602537,230.436395862185,329.69977351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| ||
|EntrezGene=16922 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENSMUST00000146933_5end | |||
|description=CAGE_peak_1_at_Phyh_5end | |||
|id=chr2:4840087..4840108,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!3.13e-11!23;UBERON:0009856!3.13e-11!23;UBERON:0002107!8.93e-11!22;UBERON:0007499!8.93e-11!22;UBERON:0006925!8.93e-11!22;UBERON:0009497!8.93e-11!22;UBERON:0000015!8.93e-11!22;UBERON:0002423!8.93e-11!22;UBERON:0006235!8.93e-11!22;UBERON:0008835!8.93e-11!22;UBERON:0003894!8.93e-11!22;UBERON:0004161!8.93e-11!22;UBERON:0008836!8.93e-11!22;UBERON:0002365!1.15e-09!25;UBERON:0002330!1.15e-09!25;UBERON:0003914!1.56e-09!47;UBERON:0007023!5.34e-07!51;UBERON:0005256!6.04e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.13e-11,23;UBERON:0009856,3.13e-11,23;UBERON:0002107,8.93e-11,22;UBERON:0007499,8.93e-11,22;UBERON:0006925,8.93e-11,22;UBERON:0009497,8.93e-11,22;UBERON:0000015,8.93e-11,22;UBERON:0002423,8.93e-11,22;UBERON:0006235,8.93e-11,22;UBERON:0008835,8.93e-11,22;UBERON:0003894,8.93e-11,22;UBERON:0004161,8.93e-11,22;UBERON:0008836,8.93e-11,22;UBERON:0000160,1.02e-09,31;UBERON:0002365,1.15e-09,25;UBERON:0002330,1.15e-09,25;UBERON:0003914,1.56e-09,47;UBERON:0003104,1.20e-07,61;UBERON:0009142,1.20e-07,61;UBERON:0005256,3.34e-07,45;UBERON:0005409,4.83e-07,47;UBERON:0007023,5.34e-07,51 | |||
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| |||
|short_description=p1@Phyh | |||
}} |
Revision as of 00:03, 14 September 2013
Short description: | p1@Phyh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phyh_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -17bp_to_ENSMUST00000146933_5end |
EntrezGene: | Phyh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.13e-11 | 23 |
sac | 3.13e-11 | 23 |
liver | 8.93e-11 | 22 |
epithelial sac | 8.93e-11 | 22 |
digestive gland | 8.93e-11 | 22 |
epithelium of foregut-midgut junction | 8.93e-11 | 22 |
anatomical boundary | 8.93e-11 | 22 |
hepatobiliary system | 8.93e-11 | 22 |
foregut-midgut junction | 8.93e-11 | 22 |
hepatic diverticulum | 8.93e-11 | 22 |
liver primordium | 8.93e-11 | 22 |
septum transversum | 8.93e-11 | 22 |
liver bud | 8.93e-11 | 22 |
intestine | 1.02e-09 | 31 |
exocrine gland | 1.15e-09 | 25 |
exocrine system | 1.15e-09 | 25 |
epithelial tube | 1.56e-09 | 47 |
mesenchyme | 1.20e-07 | 61 |
entire embryonic mesenchyme | 1.20e-07 | 61 |
trunk mesenchyme | 3.34e-07 | 45 |
gastrointestinal system | 4.83e-07 | 47 |
adult organism | 5.34e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.