FFCP PHASE1:Hg19::chr7:19185475..19185487,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=222894|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16660|TSSclassifier=W|UniProt=Q96RJ6|association_with_transcript=-431bp_to_ENST00000275461,NM_152898,uc003suo.1_5end|coexpression_cluster_id=C85|description=CAGE_peak_1_at_FERD3L_5end|id=chr7:19185475..19185487,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;3.49e-79;5!CL:0002321;1.82e-27;15|ontology_enrichment_celltype_v019_2=CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59|ontology_enrichment_development_v019=CL:0000221;8.21e-08;72|ontology_enrichment_disease=DOID:169!6.71e-16!6;DOID:171!6.20e-10!10|ontology_enrichment_disease_v019=DOID:169;2.83e-66;6!DOID:171;2.00e-40;10!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22|ontology_enrichment_disease_v019_2=DOID:169,2.83e-66,6;DOID:171,2.00e-40,10;DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22|ontology_enrichment_uberon=UBERON:0002336!3.28e-23!1;UBERON:0001018!3.28e-23!1;UBERON:0002473!3.28e-23!1;UBERON:0005340!3.28e-23!1;UBERON:0002316!3.28e-23!1;UBERON:0003544!3.28e-23!1;UBERON:0001020!3.28e-23!1;UBERON:0005970!3.28e-23!1;UBERON:0002437!3.28e-23!1;UBERON:0000013!7.24e-19!5;UBERON:0002410!7.24e-19!5;UBERON:0001950!4.28e-17!20;UBERON:0002791!2.68e-16!33;UBERON:0001893!7.71e-16!34;UBERON:0002619!1.19e-15!22;UBERON:0000073!2.47e-14!94;UBERON:0001016!2.47e-14!94;UBERON:0000956!6.75e-14!25;UBERON:0000203!6.75e-14!25;UBERON:0001049!1.30e-13!57;UBERON:0005068!1.30e-13!57;UBERON:0006241!1.30e-13!57;UBERON:0007135!1.30e-13!57;UBERON:0002780!3.08e-13!41;UBERON:0001890!3.08e-13!41;UBERON:0006240!3.08e-13!41;UBERON:0002616!3.70e-13!59;UBERON:0003080!6.18e-13!42;UBERON:0001876!2.32e-12!2;UBERON:0005162!2.59e-12!2;UBERON:0000122!2.59e-12!2;UBERON:0001870!3.62e-12!2;UBERON:0001871!4.67e-12!7;UBERON:0000955!4.02e-11!69;UBERON:0006238!4.02e-11!69;UBERON:0001869!4.87e-11!32;UBERON:0000010!6.22e-11!8;UBERON:0002020!1.98e-10!34;UBERON:0003528!1.98e-10!34;UBERON:0001017!2.14e-09!82;UBERON:0003075!4.53e-09!86;UBERON:0007284!4.53e-09!86;UBERON:0003056!5.06e-09!61;UBERON:0005743!5.75e-09!86;UBERON:0002771!9.66e-09!3;UBERON:0002346!1.14e-08!90;UBERON:0001896!1.30e-08!3;UBERON:0005290!1.30e-08!3;UBERON:0010096!1.30e-08!3;UBERON:0004121!5.72e-08!169;UBERON:0000924!8.83e-08!173;UBERON:0006601!8.83e-08!173;UBERON:0007023!7.71e-07!115|ontology_enrichment_uberon_v019=UBERON:0000013;3.49e-79;5!UBERON:0002410;3.49e-79;5!UBERON:0000010;9.75e-45;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.49e-79,5;UBERON:0002410,3.49e-79,5;UBERON:0000010,9.75e-45,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,13.4289089868834,0,0,10.7025445428174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@FERD3L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=222894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16660 | |||
|TSSclassifier=W | |||
|UniProt=Q96RJ6 | |||
|association_with_transcript=-431bp_to_ENST00000275461,NM_152898,uc003suo.1_5end | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_1_at_FERD3L_5end | |||
|id=chr7:19185475..19185487,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.49e-79;5!CL:0002321;1.82e-27;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000221;8.21e-08;72 | |||
|ontology_enrichment_disease=DOID:169!6.71e-16!6;DOID:171!6.20e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:169;2.83e-66;6!DOID:171;2.00e-40;10!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.83e-66,6;DOID:171,2.00e-40,10;DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22 | |||
|ontology_enrichment_uberon=UBERON:0002336!3.28e-23!1;UBERON:0001018!3.28e-23!1;UBERON:0002473!3.28e-23!1;UBERON:0005340!3.28e-23!1;UBERON:0002316!3.28e-23!1;UBERON:0003544!3.28e-23!1;UBERON:0001020!3.28e-23!1;UBERON:0005970!3.28e-23!1;UBERON:0002437!3.28e-23!1;UBERON:0000013!7.24e-19!5;UBERON:0002410!7.24e-19!5;UBERON:0001950!4.28e-17!20;UBERON:0002791!2.68e-16!33;UBERON:0001893!7.71e-16!34;UBERON:0002619!1.19e-15!22;UBERON:0000073!2.47e-14!94;UBERON:0001016!2.47e-14!94;UBERON:0000956!6.75e-14!25;UBERON:0000203!6.75e-14!25;UBERON:0001049!1.30e-13!57;UBERON:0005068!1.30e-13!57;UBERON:0006241!1.30e-13!57;UBERON:0007135!1.30e-13!57;UBERON:0002780!3.08e-13!41;UBERON:0001890!3.08e-13!41;UBERON:0006240!3.08e-13!41;UBERON:0002616!3.70e-13!59;UBERON:0003080!6.18e-13!42;UBERON:0001876!2.32e-12!2;UBERON:0005162!2.59e-12!2;UBERON:0000122!2.59e-12!2;UBERON:0001870!3.62e-12!2;UBERON:0001871!4.67e-12!7;UBERON:0000955!4.02e-11!69;UBERON:0006238!4.02e-11!69;UBERON:0001869!4.87e-11!32;UBERON:0000010!6.22e-11!8;UBERON:0002020!1.98e-10!34;UBERON:0003528!1.98e-10!34;UBERON:0001017!2.14e-09!82;UBERON:0003075!4.53e-09!86;UBERON:0007284!4.53e-09!86;UBERON:0003056!5.06e-09!61;UBERON:0005743!5.75e-09!86;UBERON:0002771!9.66e-09!3;UBERON:0002346!1.14e-08!90;UBERON:0001896!1.30e-08!3;UBERON:0005290!1.30e-08!3;UBERON:0010096!1.30e-08!3;UBERON:0004121!5.72e-08!169;UBERON:0000924!8.83e-08!173;UBERON:0006601!8.83e-08!173;UBERON:0007023!7.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.49e-79;5!UBERON:0002410;3.49e-79;5!UBERON:0000010;9.75e-45;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.49e-79,5;UBERON:0002410,3.49e-79,5;UBERON:0000010,9.75e-45,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,13.4289089868834,0,0,10.7025445428174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@FERD3L | |||
}} |
Revision as of 00:22, 14 September 2013
Short description: | p1@FERD3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FERD3L_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -431bp_to_ENST00000275461, NM_152898, uc003suo.1_5end |
EntrezGene: | FERD3L |
HGNC: | 16660 |
UniProt: | Q96RJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.49e-79 | 5 |
autonomic nervous system | 3.49e-79 | 5 |
peripheral nervous system | 9.75e-45 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.83e-66 | 6 |
neuroectodermal tumor | 2.00e-40 | 10 |
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.