FFCP PHASE1:Mm9::chr3:129534292..129534324,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68147|HGNC=|MCL_coexpression_id=64|UniProt=Q9CY66|association_with_transcript=0bp_to_ENSMUST00000029643,NM_026578,uc008rim.2_5end|description=CAGE_peak_3_at_Gar1_5end|id=chr3:129534292..129534324,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.49e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.70e-08,29;UBERON:0005057,5.70e-08,29|phase1_expression=1.44133962394315,1.74487703819681,0.909998478779072,0,0.500895729946347,1.84667199103079,0.700837921786577,1.16210991097419,2.53419699873,3.7450324211519,8.90333434772626,7.41881078656629,0.856003649656029,1.13646523144697,6.66219523631325,3.23960427823721,0.699561878128147,0.473193248037357,1.50825876966313,0.42438965179803,1.7008658030214,2.38298282882125,2.35079810225042,1.59992422793407,1.60586496747019,0.57423196411502,0.430761996159075,1.939241094173,2.09025761402011,1.76421090831952,2.43903561720835,6.35030673459631,7.38077745101484,31.6963362030877,2.59966457776147,1.66234645358492,1.02084678131185,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0,0.881277725829041,0.304130793658544,1.10128051297009,2.34717403304412,1.74420125104357,0.878744730937887,0.58328969722285,1.53985063787899,4.31257693094915,1.00669563634642,0,1.00828139742739,2.31533492432352,0.85960031981627,0,1.61853168687678,2.11596391708813,2.53532561402472,2.71075625655306,0,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,1.53687322128622,4.76972216618997,3.37514845829227,2.94454945891935,0.285650984403804,0.883474163806454,3.1847607795888,2.30029130443767,5.51531271966013,0,0.383062014255563,0.307213066512487,1.18697658957174,1.00636407962651,1.56274011167028,0.558365998002762,0,1.22238598221448,0.883885756421003,0.854230084794618,1.3047961207771,2.57469057332826,1.28471652181535,0.289864488701678,0,2.719885334831,0,0.649776417447669,1.79210754838934,1.40444420131752,1.02258193546835,0.779358013808606,1.7666978725517,2.11265129665021,0,0,0,3.24736561516821,3.04031838570118,1.51657333504435,1.1418387971906,1.03575153458869,0.742210695324124,2.60227990149204,1.82679286987285,2.30615497256059,1.3565037649736,1.29347577849275,1.13099932196708,1.48316980640624,0.433798070759735,3.5384422077995,1.45590164952668,2.42925670306433,1.93950101254089,0,1.46390398505774,1.04723353406728,1.27728527604296,1.55759661857696,1.19980546198682,3.68503658511888,0.449371918214468,1.37250180845588,2.26177833803156,0.347648640384553,0.511430914660661,0.62336413367868,0.648965052271031,2.24046600470696,1.49288364732112,0,1.05220927943237,2.08192708740326,3.21862946206862,1.98068342785884,2.41127708537144,2.65342346690179,2.43416068541215,2.34254311399322,0.776110112217047,3.66465587985832,3.40390944302075,2.11141348996739,1.97276159184817,1.39023624612799,1.74126083261083,1.4404749548556,3.38358253591438,3.51106593656617,2.31613116403244,1.98914449576915,4.14251545071004,2.11073453982987,2.52086886045421,1.65721314909647,2.36117078096885,1.85120535464854,1.39520366850245,1.87791380979733,1.16765342367169,0.822799249567402,1.97000956894914,0.729619285912702,1.46199987425332,0.878200461164203,0.939444931322602,0.841159794256509,1.74937841044784,0,3.17340679996253,3.41261200856374,2.09013004674395,3.47942145569652,2.62188582010345,2.00140239460383,1.52180500890047,1.42358718463353,1.31759163779209,2.01068167040216,2.98434708061726,2.14460495831032,1.79763881730844,1.08069024937347,0.597423819763102,2.46568271239006,3.65595240351132,2.25415471346161,1.4255592949172,1.35766741017338,2.73529697572242,1.26473074248515,1.77132177575523,0.941992367048249,0.987177311374404,1.77871576252289,5.6727335943472,7.07612382407531,4.72210436008193,6.28866376304359,5.06472035480075,1.52775511068852,1.72617682470486,1.45921704097532,1.92192989231657,2.87536413054709,1.86070473834252,2.18426371180192,1.01031551178845,1.79397413521912,0.482443521363367,0.923765950833023,3.7898282354097,4.88894929326078,3.22515662972857,1.64283173801951,1.50755631697634,0.714130922658041,0.195133647857799,0.315270288212382,1.10732344824387,0.797273843287435,1.14704320301017,0.345369963731791,0.289298117163023,3.01582567878545,0,0.983528546038072,1.37968373152366,0.481651769963376,0.586058432961016,2.45902418065013,0.504941854408746,0.94652465824877,0.780877488593277,2.15423397732799,4.06246956519338,1.33679204449436,0.849229592366497,3.23848561339915,0.876767573733936,1.58115111178609,0.321321316421807,1.27746076687442,1.42452482933804,1.79175655288934,0.824850614862677,0,6.06951590387454,3.62788268357701,1.50884063804718,3.2483208216885,1.53717573971964,1.55056975900933,1.45413491791002,1.42598951353889,1.26414703174326,0,0,0.680879211507576,2.52085531643834,2.8458910432206,1.07168517515796,1.77340233642274,1.78368817602071,2.30368628842969,2.13125464380219,4.22409074514679,1.48282449604674,1.10264199027481,1.48397627647332,1.77610869365496,3.37752379597673,2.3874468800627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| ||
|EntrezGene=68147 | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=Q9CY66 | |||
|association_with_transcript=0bp_to_ENSMUST00000029643,NM_026578,uc008rim.2_5end | |||
|description=CAGE_peak_3_at_Gar1_5end | |||
|id=chr3:129534292..129534324,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.49e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.70e-08,29;UBERON:0005057,5.70e-08,29 | |||
|phase1_expression=1.44133962394315,1.74487703819681,0.909998478779072,0,0.500895729946347,1.84667199103079,0.700837921786577,1.16210991097419,2.53419699873,3.7450324211519,8.90333434772626,7.41881078656629,0.856003649656029,1.13646523144697,6.66219523631325,3.23960427823721,0.699561878128147,0.473193248037357,1.50825876966313,0.42438965179803,1.7008658030214,2.38298282882125,2.35079810225042,1.59992422793407,1.60586496747019,0.57423196411502,0.430761996159075,1.939241094173,2.09025761402011,1.76421090831952,2.43903561720835,6.35030673459631,7.38077745101484,31.6963362030877,2.59966457776147,1.66234645358492,1.02084678131185,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0,0.881277725829041,0.304130793658544,1.10128051297009,2.34717403304412,1.74420125104357,0.878744730937887,0.58328969722285,1.53985063787899,4.31257693094915,1.00669563634642,0,1.00828139742739,2.31533492432352,0.85960031981627,0,1.61853168687678,2.11596391708813,2.53532561402472,2.71075625655306,0,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,1.53687322128622,4.76972216618997,3.37514845829227,2.94454945891935,0.285650984403804,0.883474163806454,3.1847607795888,2.30029130443767,5.51531271966013,0,0.383062014255563,0.307213066512487,1.18697658957174,1.00636407962651,1.56274011167028,0.558365998002762,0,1.22238598221448,0.883885756421003,0.854230084794618,1.3047961207771,2.57469057332826,1.28471652181535,0.289864488701678,0,2.719885334831,0,0.649776417447669,1.79210754838934,1.40444420131752,1.02258193546835,0.779358013808606,1.7666978725517,2.11265129665021,0,0,0,3.24736561516821,3.04031838570118,1.51657333504435,1.1418387971906,1.03575153458869,0.742210695324124,2.60227990149204,1.82679286987285,2.30615497256059,1.3565037649736,1.29347577849275,1.13099932196708,1.48316980640624,0.433798070759735,3.5384422077995,1.45590164952668,2.42925670306433,1.93950101254089,0,1.46390398505774,1.04723353406728,1.27728527604296,1.55759661857696,1.19980546198682,3.68503658511888,0.449371918214468,1.37250180845588,2.26177833803156,0.347648640384553,0.511430914660661,0.62336413367868,0.648965052271031,2.24046600470696,1.49288364732112,0,1.05220927943237,2.08192708740326,3.21862946206862,1.98068342785884,2.41127708537144,2.65342346690179,2.43416068541215,2.34254311399322,0.776110112217047,3.66465587985832,3.40390944302075,2.11141348996739,1.97276159184817,1.39023624612799,1.74126083261083,1.4404749548556,3.38358253591438,3.51106593656617,2.31613116403244,1.98914449576915,4.14251545071004,2.11073453982987,2.52086886045421,1.65721314909647,2.36117078096885,1.85120535464854,1.39520366850245,1.87791380979733,1.16765342367169,0.822799249567402,1.97000956894914,0.729619285912702,1.46199987425332,0.878200461164203,0.939444931322602,0.841159794256509,1.74937841044784,0,3.17340679996253,3.41261200856374,2.09013004674395,3.47942145569652,2.62188582010345,2.00140239460383,1.52180500890047,1.42358718463353,1.31759163779209,2.01068167040216,2.98434708061726,2.14460495831032,1.79763881730844,1.08069024937347,0.597423819763102,2.46568271239006,3.65595240351132,2.25415471346161,1.4255592949172,1.35766741017338,2.73529697572242,1.26473074248515,1.77132177575523,0.941992367048249,0.987177311374404,1.77871576252289,5.6727335943472,7.07612382407531,4.72210436008193,6.28866376304359,5.06472035480075,1.52775511068852,1.72617682470486,1.45921704097532,1.92192989231657,2.87536413054709,1.86070473834252,2.18426371180192,1.01031551178845,1.79397413521912,0.482443521363367,0.923765950833023,3.7898282354097,4.88894929326078,3.22515662972857,1.64283173801951,1.50755631697634,0.714130922658041,0.195133647857799,0.315270288212382,1.10732344824387,0.797273843287435,1.14704320301017,0.345369963731791,0.289298117163023,3.01582567878545,0,0.983528546038072,1.37968373152366,0.481651769963376,0.586058432961016,2.45902418065013,0.504941854408746,0.94652465824877,0.780877488593277,2.15423397732799,4.06246956519338,1.33679204449436,0.849229592366497,3.23848561339915,0.876767573733936,1.58115111178609,0.321321316421807,1.27746076687442,1.42452482933804,1.79175655288934,0.824850614862677,0,6.06951590387454,3.62788268357701,1.50884063804718,3.2483208216885,1.53717573971964,1.55056975900933,1.45413491791002,1.42598951353889,1.26414703174326,0,0,0.680879211507576,2.52085531643834,2.8458910432206,1.07168517515796,1.77340233642274,1.78368817602071,2.30368628842969,2.13125464380219,4.22409074514679,1.48282449604674,1.10264199027481,1.48397627647332,1.77610869365496,3.37752379597673,2.38744688006273,2.62625439592098,1.45740418314925,0.741701208042039,4.78438466233988,2.47664241555867,2.77791791054568,4.89757988212197,5.60446333656203,4.57556346413045,1.86976272993241,2.79902904647316,1.52019971184866,1.90934123603023,3.47969592939249,2.43983360552218,2.26811215725783,2.09088296014469,1.74690050996942,1.21377911746339,1.73572257023205,1.04702376793612,1.42576470620972,0.621339313086926,3.38215763210514,6.42921147989109,6.28742263736971,4.083474955225,2.58319646955462,3.717034760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| |||
|short_description=p3@Gar1 | |||
}} | |||
Revision as of 01:30, 14 September 2013
| Short description: | p3@Gar1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Gar1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:64 |
| Association with transcript: | 0bp_to_ENSMUST00000029643, NM_026578, uc008rim.2_5end |
| EntrezGene: | Gar1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 5.70e-08 | 29 |
| immune organ | 5.70e-08 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
