FFCP PHASE1:Mm9::chr3:144955680..144955740,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71355|HGNC=|MCL_coexpression_id=225|UniProt=Q30D77|association_with_transcript=244bp_to_ENSMUST00000029848,NM_027770,uc008rqm.1,uc012czb.1_5end|description=CAGE_peak_1_at_Col24a1_5end|id=chr3:144955680..144955740,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.07e-08!333|ontology_enrichment_uberon_v019_2=|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,5.32285581268876,0,0,0,0,0.279972843250725,0,0,0,0,2.57259436035947,1.71920063963254,0,0,0,0.633831403506179,0.677689064138264,0,0,2.96659908770092,1.4209602298922,0,0,0.103689612308478,0.135005938331691,0,1.99955689082663,1.54607978666129,0,0.287536413054709,0,0,0.383062014255563,0.768032666281217,0.131886287730194,0.274462930807229,0.52091337055676,1.11673199600552,1.68828783009504,0.916789486660861,1.17851434189467,0.711858403995515,0,0.075726193333184,0.151143120213571,0.289864488701678,1.72084775396277,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0.173485326766136,0.913396434936424,0.922461989024234,0,1.05829836422134,0.125666591329675,0.741584903203122,0,3.5384422077995,27.0150639412173,23.6300424752621,41.2143965164939,1.86391761218122,0,0,1.78819938646014,0,0,0,1.3481157546434,0,0,1.56441888173049,2.81287003063364,0.20778804455956,0.486723789203273,1.32391173005411,18.5366386209039,0,0.420883711772948,2.86264974517948,3.67843367093557,3.60124259610698,8.74087943447147,6.46346741937615,6.66191345481219,4.49768277886698,4.13925393182425,0,2.64748512234947,10.205165201509,8.11024209982027,9.73165372289593,29.253181987862,14.610531684964,1.59227413454795,0,0,0,0.207125772535502,1.40715635988658,1.62055855314913,1.65721314909647,1.37734962223183,2.31400669331067,2.55787339225449,6.70683503499048,2.80236821681207,3.62031669809657,3.61168420974009,1.05389452409612,0.584799949701329,0,0.402619256281115,0,0.411618449517138,0,2.11560453330835,2.55945900642281,3.0190767341857,3.99489130098489,4.23535401709019,5.11469500843202,4.1849637744763,4.74529061544512,4.44687177754829,4.77536896720512,3.38226002469956,4.28920991662064,3.59527763461689,1.94524244887225,1.59313018603494,0.948339504765408,2.17072173958485,6.76246414038483,4.48032921259691,3.87904974335251,3.92760591385784,1.7706230394792,0.147610147979602,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,2.894125917029,0,2.01387296215567,1.45921704097532,0.823684239564244,0,1.11642284300551,1.87222603868736,0.505157755894224,0.179397413521912,0.482443521363367,0,1.13694847062291,2.28150967018836,3.56464680127895,3.05097322775053,6.03022526790537,6.18913466303636,2.73187107000918,9.61574379047765,8.63712289630222,9.72674088810671,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0,1.44495530989013,1.05490517932983,0,3.7870639080656,0,0.390438744296638,0,0,0,0,0,0,0,8.67567554338879,2.41298144854057,0.712262414669021,1.14020871547503,4.45419332025846,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,1.55056975900933,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,1.26042765821917,0.517434735131018,0.857348140126369,2.30542303734956,1.60531935841864,2.13913726782757,2.43571959291679,1.40803024838226,0.63549621259146,0,1.48397627647332,3.06782410722221,4.04096597018644,2.02932984805332,1.47726809770555,3.49777003955821,1.48340241608408,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,0,1.26534397432454,2.84647253977588,3.78018692876304,3.13632444021703,3.05707589244649,3.64133735239016,3.47144514046411,1.04702376793612,1.03691978633434,0,0,0.747582730219894,0.496375471371293,0.972255941720238,1.29159823477731,1.18269287843545,1.64300134104056,1.17183946359555,0.838874755405687,0.241584120826006,0.288030006257865,0,1.82452693761148,1.02710957164827,0.25984164595559,0.895133478337407,0.993406773906324,0,0.443068581523732,0.201932899896295,0.0762068066549998,0,0,0,0,3.40095575422817,0,0,0,0.965947970160952,3.56596703357246,8.42497471629419,5.14484109789758,0,3.3885110557024,3.22227665555024,2.29158205375759,4.81188910562325,3.42541259885321,1.5107877947794,2.02506750069542,0.45032120322422,1.35942722695261,0.51776031175182,0.518936737920883,2.39414924040619,4.95127456686989,11.1829089851415,5.8691685535835,11.0306105070008,17.5574914963276,14.2164189494837,22.1434254618353,19.7103825175762,20.0248646913289,15.0901073108861,17.8855279267475,15.5581120343832,17.1732052177284,20.4806287251722,15.7602683285003,13.5036454324594,15.6592642305257,14.8670909335741,15.4291163573437,16.3277741666591,13.8292990169446,20.348498328526,16.6573603335135,17.4306092256854,13.9025259383307,20.7825072035896,13.9878237261238,12.906272248128,15.4225523561426,15.563708215339,15.5507796404482,17.3529262128282,16.9757817663404,12.7403394748352,9.59119594626174,7.52048689169044,11.8598765882683,14.117850823649,20.1725016989767|short_description=p1@Col24a1}} | ||
|EntrezGene=71355 | |||
|HGNC= | |||
|MCL_coexpression_id=225 | |||
|UniProt=Q30D77 | |||
|association_with_transcript=244bp_to_ENSMUST00000029848,NM_027770,uc008rqm.1,uc012czb.1_5end | |||
|description=CAGE_peak_1_at_Col24a1_5end | |||
|id=chr3:144955680..144955740,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.07e-08!333 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,5.32285581268876,0,0,0,0,0.279972843250725,0,0,0,0,2.57259436035947,1.71920063963254,0,0,0,0.633831403506179,0.677689064138264,0,0,2.96659908770092,1.4209602298922,0,0,0.103689612308478,0.135005938331691,0,1.99955689082663,1.54607978666129,0,0.287536413054709,0,0,0.383062014255563,0.768032666281217,0.131886287730194,0.274462930807229,0.52091337055676,1.11673199600552,1.68828783009504,0.916789486660861,1.17851434189467,0.711858403995515,0,0.075726193333184,0.151143120213571,0.289864488701678,1.72084775396277,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0.173485326766136,0.913396434936424,0.922461989024234,0,1.05829836422134,0.125666591329675,0.741584903203122,0,3.5384422077995,27.0150639412173,23.6300424752621,41.2143965164939,1.86391761218122,0,0,1.78819938646014,0,0,0,1.3481157546434,0,0,1.56441888173049,2.81287003063364,0.20778804455956,0.486723789203273,1.32391173005411,18.5366386209039,0,0.420883711772948,2.86264974517948,3.67843367093557,3.60124259610698,8.74087943447147,6.46346741937615,6.66191345481219,4.49768277886698,4.13925393182425,0,2.64748512234947,10.205165201509,8.11024209982027,9.73165372289593,29.253181987862,14.610531684964,1.59227413454795,0,0,0,0.207125772535502,1.40715635988658,1.62055855314913,1.65721314909647,1.37734962223183,2.31400669331067,2.55787339225449,6.70683503499048,2.80236821681207,3.62031669809657,3.61168420974009,1.05389452409612,0.584799949701329,0,0.402619256281115,0,0.411618449517138,0,2.11560453330835,2.55945900642281,3.0190767341857,3.99489130098489,4.23535401709019,5.11469500843202,4.1849637744763,4.74529061544512,4.44687177754829,4.77536896720512,3.38226002469956,4.28920991662064,3.59527763461689,1.94524244887225,1.59313018603494,0.948339504765408,2.17072173958485,6.76246414038483,4.48032921259691,3.87904974335251,3.92760591385784,1.7706230394792,0.147610147979602,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,2.894125917029,0,2.01387296215567,1.45921704097532,0.823684239564244,0,1.11642284300551,1.87222603868736,0.505157755894224,0.179397413521912,0.482443521363367,0,1.13694847062291,2.28150967018836,3.56464680127895,3.05097322775053,6.03022526790537,6.18913466303636,2.73187107000918,9.61574379047765,8.63712289630222,9.72674088810671,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0,1.44495530989013,1.05490517932983,0,3.7870639080656,0,0.390438744296638,0,0,0,0,0,0,0,8.67567554338879,2.41298144854057,0.712262414669021,1.14020871547503,4.45419332025846,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,1.55056975900933,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,1.26042765821917,0.517434735131018,0.857348140126369,2.30542303734956,1.60531935841864,2.13913726782757,2.43571959291679,1.40803024838226,0.63549621259146,0,1.48397627647332,3.06782410722221,4.04096597018644,2.02932984805332,1.47726809770555,3.49777003955821,1.48340241608408,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,0,1.26534397432454,2.84647253977588,3.78018692876304,3.13632444021703,3.05707589244649,3.64133735239016,3.47144514046411,1.04702376793612,1.03691978633434,0,0,0.747582730219894,0.496375471371293,0.972255941720238,1.29159823477731,1.18269287843545,1.64300134104056,1.17183946359555,0.838874755405687,0.241584120826006,0.288030006257865,0,1.82452693761148,1.02710957164827,0.25984164595559,0.895133478337407,0.993406773906324,0,0.443068581523732,0.201932899896295,0.0762068066549998,0,0,0,0,3.40095575422817,0,0,0,0.965947970160952,3.56596703357246,8.42497471629419,5.14484109789758,0,3.3885110557024,3.22227665555024,2.29158205375759,4.81188910562325,3.42541259885321,1.5107877947794,2.02506750069542,0.45032120322422,1.35942722695261,0.51776031175182,0.518936737920883,2.39414924040619,4.95127456686989,11.1829089851415,5.8691685535835,11.0306105070008,17.5574914963276,14.2164189494837,22.1434254618353,19.7103825175762,20.0248646913289,15.0901073108861,17.8855279267475,15.5581120343832,17.1732052177284,20.4806287251722,15.7602683285003,13.5036454324594,15.6592642305257,14.8670909335741,15.4291163573437,16.3277741666591,13.8292990169446,20.348498328526,16.6573603335135,17.4306092256854,13.9025259383307,20.7825072035896,13.9878237261238,12.906272248128,15.4225523561426,15.563708215339,15.5507796404482,17.3529262128282,16.9757817663404,12.7403394748352,9.59119594626174,7.52048689169044,11.8598765882683,14.117850823649,20.1725016989767 | |||
|short_description=p1@Col24a1 | |||
}} | |||
Revision as of 01:45, 14 September 2013
| Short description: | p1@Col24a1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Col24a1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:225 |
| Association with transcript: | 244bp_to_ENSMUST00000029848, NM_027770, uc008rqm.1, uc012czb.1_5end |
| EntrezGene: | Col24a1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
