FFCP PHASE1:Mm9::chr3:90017499..90017552,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100043813|HGNC=|UniProt=Q6ZWU9|association_with_transcript=16bp_to_NM_001190258_5end|description=CAGE_peak_2_at_Gm9846_5end|id=chr3:90017499..90017552,-|ontology_enrichment_celltype=CL:0000144!3.50e-20!121;CL:0000012!3.50e-20!121;CL:0002371!2.46e-18!118;CL:0000548!5.33e-17!115;CL:0000004!5.33e-17!115;CL:0000255!5.33e-17!115;CL:0000034!6.44e-15!97;CL:0000723!2.72e-13!91;CL:0000048!2.72e-13!91;CL:0002321!1.61e-09!70;CL:0000220!1.61e-09!70;CL:0000063!3.23e-09!66;CL:0000219!6.87e-09!54;CL:0000055!3.47e-07!50;CL:0002320!5.23e-07!46;CL:0000134!5.23e-07!46|ontology_enrichment_celltype_v019_2=CL:0000034,5.28e-15,97;CL:0000723,2.25e-13,91;CL:0000048,2.25e-13,91;CL:0002321,1.55e-09,70;CL:0000219,5.50e-09,54;CL:0002320,4.25e-07,46;CL:0000134,4.25e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.23e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.25e-07,46|phase1_expression=3.68342348341026,5.93258192986914,8.18998630901165,5.44435580352294,3.00537437967808,5.87577451691614,3.50418960893289,3.87369970324729,13.2341398822567,16.3845168425395,3.25314139628459,6.46154487862225,2.9104124088305,3.05971408466491,3.33109761815663,1.41732687172878,2.79824751251259,4.57420139769445,2.87940310572051,3.39511721438424,4.16712121740242,4.0709289992363,2.61199789138935,4.15980299262857,4.81759490241057,5.16808767703518,5.59990595006797,4.52489588640367,0.760093677825496,3.2763916868791,7.98229838359097,3.17515336729816,6.1506478758457,0,4.33277429626912,2.82598897109437,3.26670970019791,7.95210098400125,10.9386948233332,3.66466620781659,13.5293242247133,10.9287277593351,9.71020706062307,8.68688044031483,9.93493925951243,10.0950713688925,14.8654355426127,3.05235218932625,5.4921545683618,5.24960727500565,4.61955191363696,5.75010257459886,5.36904339384756,5.80289713609076,2.68875039313971,3.60163210450326,2.86533439938757,5.15672092277442,6.87875966922632,5.81890077199236,4.43681982454325,11.5207140903505,7.11435836888911,6.74924787961049,3.9554654502679,6.3943210345149,5.99200221036809,6.14749288514487,3.11068836925433,2.8351247049655,2.52389953621658,5.99867067247988,5.74258206474195,4.40966877173835,2.58782771749238,7.35375029288017,5.50579404996943,3.57524546638526,3.68655679814984,4.87979264601717,6.49562269577109,6.77187381723788,5.30447698102624,5.06486349028512,5.50073691996516,3.83017161115768,3.27454865837937,3.35519002485541,4.69502398665741,2.72057616384428,26.3776684718527,0,5.439770669662,3.77792234146472,1.29955283489534,3.13618820968135,1.26399978118577,4.94247935476367,5.45550609666024,4.24007489412408,2.95771181531029,3.84979432242953,2.54805239706646,0,4.76280290224671,3.80039798212648,2.52762222507392,2.62622923353838,1.8125651855302,4.00793775475027,5.72501578328248,5.48037860961854,5.76538743140146,7.08396410597326,3.76283862834255,3.39299796590124,0.988779870937496,1.15679485535929,0,1.7794353494215,1.54589062922275,0.969750506270444,0,2.04946557908083,1.46612694769419,2.55457055208591,11.7418822015802,16.7972764678154,12.7070227073065,2.99581278809645,2.74500361691176,2.01046963380583,1.73824320192276,3.58001640262463,2.70124457927428,4.54275536589721,2.74966282395854,2.23932547098167,2.77995034277042,0.631325567659422,2.34216797332867,2.5289231487682,2.16074555766419,2.10986744970001,1.49680298132921,1.15302348256365,1.3118241438362,2.06962696591213,3.44908788692548,2.83659120251729,2.28736461413134,2.41115305670332,3.33656699070717,4.179025998266,2.88094990971121,3.58261680273288,11.2354109970118,10.2939162845886,7.38825098428541,3.52113813310353,4.92504725960302,5.04173772090842,2.60419209143731,1.96764231747404,2.93107514486019,2.55787339225449,2.41446061259657,1.28441876603886,1.97471819896177,1.47750717671186,1.05389452409612,1.60819986167866,0.658650345873152,1.47627060636409,2.52347938276953,4.93942139420565,1.98251269790279,1.58670339998127,3.41261200856374,3.48355007790658,2.96395161040815,2.01683524623343,2.44615848229357,2.09248188723815,1.42358718463353,1.81168850196412,0.754005626400808,1.1937388322469,2.33956904542944,0,1.51296634912286,0.995706366271836,4.1726938209678,3.99869794134051,4.50830942692322,1.83286195060783,2.90928730751439,1.96380295692892,0.948548056863859,1.32849133181642,1.09899109488962,1.48076596706161,2.96452627087149,3.17005700860579,4.32429789249047,2.02375901146368,1.21716072833102,1.68824011826692,3.56476192493988,0.287696137450811,1.78348749452539,1.92192989231657,1.43768206527355,1.11642284300551,2.80833905803104,2.52578877947112,1.97337154874103,0.482443521363367,1.84753190166605,3.97931964718018,4.4000543639347,2.54617628662782,2.81628297946203,2.1775813467436,1.90434912708811,3.31727201358258,1.41871629695572,1.99318220683897,2.71073106717728,2.94953966488328,2.41758974612254,2.60368305446721,0,1.63171705145613,1.96705709207614,1.10374698521893,3.69266356971921,5.27452589664914,7.21313759657372,0.757412781613119,3.15508219416257,1.56175497718655,2.58508077279359,2.150719181572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| ||
|EntrezGene=100043813 | |||
|HGNC= | |||
|UniProt=Q6ZWU9 | |||
|association_with_transcript=16bp_to_NM_001190258_5end | |||
|description=CAGE_peak_2_at_Gm9846_5end | |||
|id=chr3:90017499..90017552,- | |||
|ontology_enrichment_celltype=CL:0000144!3.50e-20!121;CL:0000012!3.50e-20!121;CL:0002371!2.46e-18!118;CL:0000548!5.33e-17!115;CL:0000004!5.33e-17!115;CL:0000255!5.33e-17!115;CL:0000034!6.44e-15!97;CL:0000723!2.72e-13!91;CL:0000048!2.72e-13!91;CL:0002321!1.61e-09!70;CL:0000220!1.61e-09!70;CL:0000063!3.23e-09!66;CL:0000219!6.87e-09!54;CL:0000055!3.47e-07!50;CL:0002320!5.23e-07!46;CL:0000134!5.23e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.28e-15,97;CL:0000723,2.25e-13,91;CL:0000048,2.25e-13,91;CL:0002321,1.55e-09,70;CL:0000219,5.50e-09,54;CL:0002320,4.25e-07,46;CL:0000134,4.25e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.23e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.25e-07,46 | |||
|phase1_expression=3.68342348341026,5.93258192986914,8.18998630901165,5.44435580352294,3.00537437967808,5.87577451691614,3.50418960893289,3.87369970324729,13.2341398822567,16.3845168425395,3.25314139628459,6.46154487862225,2.9104124088305,3.05971408466491,3.33109761815663,1.41732687172878,2.79824751251259,4.57420139769445,2.87940310572051,3.39511721438424,4.16712121740242,4.0709289992363,2.61199789138935,4.15980299262857,4.81759490241057,5.16808767703518,5.59990595006797,4.52489588640367,0.760093677825496,3.2763916868791,7.98229838359097,3.17515336729816,6.1506478758457,0,4.33277429626912,2.82598897109437,3.26670970019791,7.95210098400125,10.9386948233332,3.66466620781659,13.5293242247133,10.9287277593351,9.71020706062307,8.68688044031483,9.93493925951243,10.0950713688925,14.8654355426127,3.05235218932625,5.4921545683618,5.24960727500565,4.61955191363696,5.75010257459886,5.36904339384756,5.80289713609076,2.68875039313971,3.60163210450326,2.86533439938757,5.15672092277442,6.87875966922632,5.81890077199236,4.43681982454325,11.5207140903505,7.11435836888911,6.74924787961049,3.9554654502679,6.3943210345149,5.99200221036809,6.14749288514487,3.11068836925433,2.8351247049655,2.52389953621658,5.99867067247988,5.74258206474195,4.40966877173835,2.58782771749238,7.35375029288017,5.50579404996943,3.57524546638526,3.68655679814984,4.87979264601717,6.49562269577109,6.77187381723788,5.30447698102624,5.06486349028512,5.50073691996516,3.83017161115768,3.27454865837937,3.35519002485541,4.69502398665741,2.72057616384428,26.3776684718527,0,5.439770669662,3.77792234146472,1.29955283489534,3.13618820968135,1.26399978118577,4.94247935476367,5.45550609666024,4.24007489412408,2.95771181531029,3.84979432242953,2.54805239706646,0,4.76280290224671,3.80039798212648,2.52762222507392,2.62622923353838,1.8125651855302,4.00793775475027,5.72501578328248,5.48037860961854,5.76538743140146,7.08396410597326,3.76283862834255,3.39299796590124,0.988779870937496,1.15679485535929,0,1.7794353494215,1.54589062922275,0.969750506270444,0,2.04946557908083,1.46612694769419,2.55457055208591,11.7418822015802,16.7972764678154,12.7070227073065,2.99581278809645,2.74500361691176,2.01046963380583,1.73824320192276,3.58001640262463,2.70124457927428,4.54275536589721,2.74966282395854,2.23932547098167,2.77995034277042,0.631325567659422,2.34216797332867,2.5289231487682,2.16074555766419,2.10986744970001,1.49680298132921,1.15302348256365,1.3118241438362,2.06962696591213,3.44908788692548,2.83659120251729,2.28736461413134,2.41115305670332,3.33656699070717,4.179025998266,2.88094990971121,3.58261680273288,11.2354109970118,10.2939162845886,7.38825098428541,3.52113813310353,4.92504725960302,5.04173772090842,2.60419209143731,1.96764231747404,2.93107514486019,2.55787339225449,2.41446061259657,1.28441876603886,1.97471819896177,1.47750717671186,1.05389452409612,1.60819986167866,0.658650345873152,1.47627060636409,2.52347938276953,4.93942139420565,1.98251269790279,1.58670339998127,3.41261200856374,3.48355007790658,2.96395161040815,2.01683524623343,2.44615848229357,2.09248188723815,1.42358718463353,1.81168850196412,0.754005626400808,1.1937388322469,2.33956904542944,0,1.51296634912286,0.995706366271836,4.1726938209678,3.99869794134051,4.50830942692322,1.83286195060783,2.90928730751439,1.96380295692892,0.948548056863859,1.32849133181642,1.09899109488962,1.48076596706161,2.96452627087149,3.17005700860579,4.32429789249047,2.02375901146368,1.21716072833102,1.68824011826692,3.56476192493988,0.287696137450811,1.78348749452539,1.92192989231657,1.43768206527355,1.11642284300551,2.80833905803104,2.52578877947112,1.97337154874103,0.482443521363367,1.84753190166605,3.97931964718018,4.4000543639347,2.54617628662782,2.81628297946203,2.1775813467436,1.90434912708811,3.31727201358258,1.41871629695572,1.99318220683897,2.71073106717728,2.94953966488328,2.41758974612254,2.60368305446721,0,1.63171705145613,1.96705709207614,1.10374698521893,3.69266356971921,5.27452589664914,7.21313759657372,0.757412781613119,3.15508219416257,1.56175497718655,2.58508077279359,2.15071918157297,3.56477878531831,1.98153571552183,2.02405350837447,4.09158201075837,0.790575555893047,3.21321316421807,1.98716119291576,4.62970569534864,1.46598263418218,1.81467135269789,2.65490276679926,5.82673526771955,6.95344181018927,5.84675747243284,4.13422650033082,1.22974059177571,3.10113951801865,1.09060118843252,0.712994756769443,1.58018378967908,4.21674434299995,3.09406629744561,3.40439605753788,2.34079422240703,5.43306471887569,2.57204442037911,2.12808280370728,3.21063871683727,4.11372551505302,1.8267896946876,3.75474732901937,4.2366414172764,1.32317038832977,1.15420377059036,1.61464426695906,1.38719727334758,0.954978752025092,1.96969079694074,2.62332752966866,3.33765543618917,2.9048049735635,2.68302928352189,3.1483069652851,1.88368457004691,1.36694227721025,2.51655990527175,10.538662659619,13.7152423277185,9.53579819250524,2.86401185404534,3.47969592939249,2.23651413839534,2.70013352054503,2.92723614420256,2.83871332870031,1.348643463848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| |||
|short_description=p2@Gm9846 | |||
}} |
Revision as of 02:53, 14 September 2013
Short description: | p2@Gm9846 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm9846_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_001190258_5end |
EntrezGene: | Gm9846 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.28e-15 | 97 |
somatic stem cell | 2.25e-13 | 91 |
multi fate stem cell | 2.25e-13 | 91 |
embryonic cell | 1.55e-09 | 70 |
motile cell | 5.50e-09 | 54 |
connective tissue cell | 4.25e-07 | 46 |
mesenchymal cell | 4.25e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.25e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.