FFCP PHASE1:Mm9::chr4:144590339..144590345,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:144590339..144590345,+|id=chr4:144590339..144590345,+|ontology_enrichment_celltype=CL:0000107!2.21e-15!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.59e-50,9;CL:0000068,7.15e-17,3;CL:0002202,7.15e-17,3;CL:0000069,7.15e-17,3;CL:0002632,7.15e-17,3;CL:0002368,7.15e-17,3;CL:0000307,7.15e-17,3;CL:0000377,7.15e-17,3;CL:0000540,4.75e-13,33;CL:0000047,4.75e-13,33;CL:0000031,4.75e-13,33;CL:0000404,4.75e-13,33;CL:0002321,6.27e-12,70;CL:0000393,7.17e-11,39;CL:0000211,7.17e-11,39;CL:0002319,9.38e-10,43;CL:0000221,1.66e-09,44;CL:0000133,1.66e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!2.21e-15!9;UBERON:0000010!1.93e-14!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.59e-50,9;UBERON:0000010,3.51e-41,11;UBERON:0000011,2.89e-18,3;UBERON:0010313,9.33e-18,3;UBERON:0002342,9.33e-18,3;UBERON:0002005,9.33e-18,3;UBERON:0005428,9.33e-18,3;UBERON:0005062,9.33e-18,3;UBERON:0000013,1.37e-17,3;UBERON:0003126,7.15e-17,3;UBERON:0001005,7.15e-17,3;UBERON:0007196,7.15e-17,3;UBERON:0001558,7.15e-17,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,1.15945795480671,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,0,4.97929394325792,2.28023878927589,5.56076889516262,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.569003702859245,0.228497025219458,0,0.610953983535943,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9358369960665,14.055794794679,13.7870974548991,17.9226598464414,18.0466926006739,13.8707500086528,15.382806663646,9.9366991689846,10.6727700045561,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.905510786479282,0.643011105094777,1.41872186913819,0.891844088010353,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr4:144590339..144590345,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:144590339..144590345,+ | |||
|id=chr4:144590339..144590345,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.21e-15!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.59e-50,9;CL:0000068,7.15e-17,3;CL:0002202,7.15e-17,3;CL:0000069,7.15e-17,3;CL:0002632,7.15e-17,3;CL:0002368,7.15e-17,3;CL:0000307,7.15e-17,3;CL:0000377,7.15e-17,3;CL:0000540,4.75e-13,33;CL:0000047,4.75e-13,33;CL:0000031,4.75e-13,33;CL:0000404,4.75e-13,33;CL:0002321,6.27e-12,70;CL:0000393,7.17e-11,39;CL:0000211,7.17e-11,39;CL:0002319,9.38e-10,43;CL:0000221,1.66e-09,44;CL:0000133,1.66e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.21e-15!9;UBERON:0000010!1.93e-14!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.59e-50,9;UBERON:0000010,3.51e-41,11;UBERON:0000011,2.89e-18,3;UBERON:0010313,9.33e-18,3;UBERON:0002342,9.33e-18,3;UBERON:0002005,9.33e-18,3;UBERON:0005428,9.33e-18,3;UBERON:0005062,9.33e-18,3;UBERON:0000013,1.37e-17,3;UBERON:0003126,7.15e-17,3;UBERON:0001005,7.15e-17,3;UBERON:0007196,7.15e-17,3;UBERON:0001558,7.15e-17,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,1.15945795480671,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,0,4.97929394325792,2.28023878927589,5.56076889516262,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.569003702859245,0.228497025219458,0,0.610953983535943,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9358369960665,14.055794794679,13.7870974548991,17.9226598464414,18.0466926006739,13.8707500086528,15.382806663646,9.9366991689846,10.6727700045561,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.905510786479282,0.643011105094777,1.41872186913819,0.891844088010353,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:144590339..144590345,+ | |||
}} |
Revision as of 04:23, 14 September 2013
Short description: | p@chr4:144590339..144590345, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:144590339..144590345, + |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.59e-50 | 9 |
duct epithelial cell | 7.15e-17 | 3 |
epithelial cell of tracheobronchial tree | 7.15e-17 | 3 |
branched duct epithelial cell | 7.15e-17 | 3 |
epithelial cell of lower respiratory tract | 7.15e-17 | 3 |
respiratory epithelial cell | 7.15e-17 | 3 |
tracheal epithelial cell | 7.15e-17 | 3 |
tracheoblast | 7.15e-17 | 3 |
neuron | 4.75e-13 | 33 |
neuronal stem cell | 4.75e-13 | 33 |
neuroblast | 4.75e-13 | 33 |
electrically signaling cell | 4.75e-13 | 33 |
embryonic cell | 6.27e-12 | 70 |
electrically responsive cell | 7.17e-11 | 39 |
electrically active cell | 7.17e-11 | 39 |
neural cell | 9.38e-10 | 43 |
ectodermal cell | 1.66e-09 | 44 |
neurectodermal cell | 1.66e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.59e-50 | 9 |
peripheral nervous system | 3.51e-41 | 11 |
parasympathetic nervous system | 2.89e-18 | 3 |
neural crest-derived structure | 9.33e-18 | 3 |
neural crest | 9.33e-18 | 3 |
enteric nervous system | 9.33e-18 | 3 |
vagal neural crest | 9.33e-18 | 3 |
neural fold | 9.33e-18 | 3 |
sympathetic nervous system | 1.37e-17 | 3 |
trachea | 7.15e-17 | 3 |
respiratory airway | 7.15e-17 | 3 |
tracheobronchial tree | 7.15e-17 | 3 |
lower respiratory tract | 7.15e-17 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.