FFCP PHASE1:Mm9::chr6:124707038..124707049,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13498|HGNC=|UniProt=O35126|association_with_transcript=-496bp_to_ENSMUST00000088357_5end|description=CAGE_peak_12_at_Atn1_5end|id=chr6:124707038..124707049,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,7.31e-13,8;CL:0000128,3.81e-10,6;CL:0000126,3.81e-10,6;CL:0000127,3.81e-10,6;CL:0000333,6.70e-10,10;CL:0000095,6.70e-10,10;CL:0000243,6.70e-10,10;CL:0000123,6.70e-10,10;CL:0000125,6.70e-10,10;CL:0000030,6.70e-10,10;CL:0000339,6.70e-10,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.45e-07,8;UBERON:0003296,1.45e-07,8;UBERON:0010133,1.45e-07,8;UBERON:0002102,1.79e-07,7;UBERON:0004710,1.79e-07,7;UBERON:0005419,1.79e-07,7;UBERON:0005417,1.79e-07,7;UBERON:0005729,1.79e-07,7|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.881277725829041,0.709638518536602,0.550640256485045,8.60630478782843,2.61630187656536,1.75748946187577,3.69416808241138,1.53985063787899,2.87505128729943,0,0,0,0.257259436035947,0,1.54701627683233,1.01158230429799,0.528990979272033,0,3.38844532069132,2.66788438833342,0,0.988866362566974,0,1.79760066311043,2.30530983192933,0.725827286159344,1.08004750665353,0.841299845405528,0.856952953211411,0.220868540951614,0.367472397644862,1.15014565221884,1.83843757322004,0,0.383062014255563,0.921639199537461,0.791317726381163,0.640413505216868,2.08365348222704,0.558365998002762,0,0.45839474333043,0.883885756421003,0.427115042397309,0.372798891650601,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,1.87473354835864,0.779358013808606,0,0.281686839553361,2.56652954828636,0,7.11066703153331,0,0,0,0,0,0.742210695324124,1.04091196059682,0.304465478312141,0.922461989024234,0.150722640552623,0.23517741427141,0.376999773989026,0,0.289198713839823,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,0,0.255457055208591,0,0.599902730993408,0,0.748953197024114,0.457500602818626,0.502617408451458,0.347648640384553,0.255715457330331,0,0.648965052271031,1.52759045775474,0.373220911830279,0.252722758433675,0.420883711772948,1.43132487258974,1.14951052216736,1.62055916824814,1.05493372485001,0.408218994907967,0.384341160854549,0.468508622798644,0.258703370739016,3.23351989399263,2.64748512234947,2.28736461413134,0.657587197282725,1.11218899690239,1.39300866608867,1.23469281844766,0.398068533636986,0,0,0.568326998791185,0.414251545071004,0,0.36012412292203,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0,0.630869845692382,0.823236899034275,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.913988100877831,3.38123207019241,1.62921062276251,0.969762435838129,0.98190147846446,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.393117990226406,0,0.608580364165509,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,1.13694847062291,1.14075483509418,2.20668611507745,0.704070744865506,1.17254380209271,0.952174563544055,0.975668239288994,0.630540576424764,0.664394068946325,0.956728611944923,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0.983609672260053,0,0,0.780877488593277,0,0.477937595905104,0.668396022247182,1.69845918473299,0.404810701674894,0.584511715822624,0.790575555893047,0,0.425820255624806,1.06839362200353,1.95464351224291,0.824850614862677,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0.775284879504663,0,0,0,0,0,0.680879211507576,1.26042765821917,1.29358683782755,1.28602221018955,1.06404140185364,1.42695054081656,1.15184314421485,1.8267896946876,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.645857706783622,1.26657142349127,0.596861720015682,0.164140899745061,0,0.370850604021019,0,1.857481811669,0.555583582109135,0,0,0,0,0.139951452323658,0.276399947608848,0,1.58167996790568,1.01659733563424,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0.621339313086926,0,1.04661582230785,0.66183396182839,1.94451188344048,1.29159823477731,1.01373675294467,0.469428954583016,0.39061315453185,0.629156066554265,0,0,0,1.21635129174099,0.924398614483445,0.77952493786677,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0.228620419965,0.403304740547362,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,1.16628013592318,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0.501572104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| ||
|EntrezGene=13498 | |||
|HGNC= | |||
|UniProt=O35126 | |||
|association_with_transcript=-496bp_to_ENSMUST00000088357_5end | |||
|description=CAGE_peak_12_at_Atn1_5end | |||
|id=chr6:124707038..124707049,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,7.31e-13,8;CL:0000128,3.81e-10,6;CL:0000126,3.81e-10,6;CL:0000127,3.81e-10,6;CL:0000333,6.70e-10,10;CL:0000095,6.70e-10,10;CL:0000243,6.70e-10,10;CL:0000123,6.70e-10,10;CL:0000125,6.70e-10,10;CL:0000030,6.70e-10,10;CL:0000339,6.70e-10,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.45e-07,8;UBERON:0003296,1.45e-07,8;UBERON:0010133,1.45e-07,8;UBERON:0002102,1.79e-07,7;UBERON:0004710,1.79e-07,7;UBERON:0005419,1.79e-07,7;UBERON:0005417,1.79e-07,7;UBERON:0005729,1.79e-07,7 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.881277725829041,0.709638518536602,0.550640256485045,8.60630478782843,2.61630187656536,1.75748946187577,3.69416808241138,1.53985063787899,2.87505128729943,0,0,0,0.257259436035947,0,1.54701627683233,1.01158230429799,0.528990979272033,0,3.38844532069132,2.66788438833342,0,0.988866362566974,0,1.79760066311043,2.30530983192933,0.725827286159344,1.08004750665353,0.841299845405528,0.856952953211411,0.220868540951614,0.367472397644862,1.15014565221884,1.83843757322004,0,0.383062014255563,0.921639199537461,0.791317726381163,0.640413505216868,2.08365348222704,0.558365998002762,0,0.45839474333043,0.883885756421003,0.427115042397309,0.372798891650601,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,1.87473354835864,0.779358013808606,0,0.281686839553361,2.56652954828636,0,7.11066703153331,0,0,0,0,0,0.742210695324124,1.04091196059682,0.304465478312141,0.922461989024234,0.150722640552623,0.23517741427141,0.376999773989026,0,0.289198713839823,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0.585561594023094,0,0.255457055208591,0,0.599902730993408,0,0.748953197024114,0.457500602818626,0.502617408451458,0.347648640384553,0.255715457330331,0,0.648965052271031,1.52759045775474,0.373220911830279,0.252722758433675,0.420883711772948,1.43132487258974,1.14951052216736,1.62055916824814,1.05493372485001,0.408218994907967,0.384341160854549,0.468508622798644,0.258703370739016,3.23351989399263,2.64748512234947,2.28736461413134,0.657587197282725,1.11218899690239,1.39300866608867,1.23469281844766,0.398068533636986,0,0,0.568326998791185,0.414251545071004,0,0.36012412292203,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0,0.630869845692382,0.823236899034275,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.913988100877831,3.38123207019241,1.62921062276251,0.969762435838129,0.98190147846446,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.393117990226406,0,0.608580364165509,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,1.13694847062291,1.14075483509418,2.20668611507745,0.704070744865506,1.17254380209271,0.952174563544055,0.975668239288994,0.630540576424764,0.664394068946325,0.956728611944923,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0.983609672260053,0,0,0.780877488593277,0,0.477937595905104,0.668396022247182,1.69845918473299,0.404810701674894,0.584511715822624,0.790575555893047,0,0.425820255624806,1.06839362200353,1.95464351224291,0.824850614862677,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0.775284879504663,0,0,0,0,0,0.680879211507576,1.26042765821917,1.29358683782755,1.28602221018955,1.06404140185364,1.42695054081656,1.15184314421485,1.8267896946876,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.645857706783622,1.26657142349127,0.596861720015682,0.164140899745061,0,0.370850604021019,0,1.857481811669,0.555583582109135,0,0,0,0,0.139951452323658,0.276399947608848,0,1.58167996790568,1.01659733563424,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0.621339313086926,0,1.04661582230785,0.66183396182839,1.94451188344048,1.29159823477731,1.01373675294467,0.469428954583016,0.39061315453185,0.629156066554265,0,0,0,1.21635129174099,0.924398614483445,0.77952493786677,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0.228620419965,0.403304740547362,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,1.16628013592318,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,1.24544817101012,1.19707462020309,0.853668028770671,0.972426868273176,0.628839487883947,0.919217542250071,1.77797382241292,0.824140228955577,0.962757628775446,0.505394423527595,0.760437899670719,1.32038438970253,0.936415074698824,0.89635213366817,0.918967503289812,0.952587382566147,0.695305955669133,0.964546102318525,0,0.588795680537589,0.685738504770831,0.887379030796687,0.953744759789284,1.0174249164263,0.752875043322645,1.01537529470012,0.914639864363863,0.526139422875686,0.407412341537585,0,0.711810108745045,0.985044823755635,0.409231043169689,0.77468420592983,0.578719832943424,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.231867835620421 | |||
|short_description=p12@Atn1 | |||
}} |
Revision as of 08:50, 14 September 2013
Short description: | p12@Atn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Atn1_5end |
Coexpression cluster: | NA |
Association with transcript: | -496bp_to_ENSMUST00000088357_5end |
EntrezGene: | Atn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 7.31e-13 | 8 |
oligodendrocyte | 3.81e-10 | 6 |
macroglial cell | 3.81e-10 | 6 |
astrocyte | 3.81e-10 | 6 |
migratory neural crest cell | 6.70e-10 | 10 |
neuron associated cell | 6.70e-10 | 10 |
glial cell (sensu Vertebrata) | 6.70e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 6.70e-10 | 10 |
glial cell | 6.70e-10 | 10 |
glioblast | 6.70e-10 | 10 |
glioblast (sensu Vertebrata) | 6.70e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.45e-07 | 8 |
gland of diencephalon | 1.45e-07 | 8 |
neuroendocrine gland | 1.45e-07 | 8 |
forelimb | 1.79e-07 | 7 |
pectoral appendage | 1.79e-07 | 7 |
pectoral appendage bud | 1.79e-07 | 7 |
forelimb bud | 1.79e-07 | 7 |
forelimb/pectoral fin field | 1.79e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.