FFCP PHASE1:Mm9::chr6:57642001..57642078,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66459|HGNC=|MCL_coexpression_id=201|UniProt=Q9D1C3|association_with_transcript=0bp_to_ENSMUST00000053386,NM_025574,uc009ccl.1,uc009ccm.1_5end|description=CAGE_peak_1_at_Pigy_5end|id=chr6:57642001..57642078,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.63e-09!47;UBERON:0003103!7.91e-09!43;UBERON:0007100!9.19e-08!18;UBERON:0000948!9.19e-08!18;UBERON:0005498!9.19e-08!18;UBERON:0004140!9.19e-08!18;UBERON:0009881!9.19e-08!18;UBERON:0004141!9.19e-08!18;UBERON:0003084!9.19e-08!18;UBERON:0007005!9.19e-08!18;UBERON:0004139!9.19e-08!18;UBERON:0004291!9.19e-08!18;UBERON:0004535!5.15e-07!23;UBERON:0001009!5.15e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.63e-09,47;UBERON:0003103,7.91e-09,43;UBERON:0007100,9.19e-08,18;UBERON:0000948,9.19e-08,18;UBERON:0005498,9.19e-08,18;UBERON:0004140,9.19e-08,18;UBERON:0009881,9.19e-08,18;UBERON:0004141,9.19e-08,18;UBERON:0003084,9.19e-08,18;UBERON:0007005,9.19e-08,18;UBERON:0004139,9.19e-08,18;UBERON:0004291,9.19e-08,18;UBERON:0004535,5.15e-07,23;UBERON:0001009,5.15e-07,23|phase1_expression=47.8845052843334,54.7891389993797,43.6799269813955,58.0731285709114,58.1039046737763,48.684988854448,46.4889154785096,15.1074288426644,36.0419128708267,35.577808000943,30.4767983441399,32.8661295060786,21.7424927012631,23.0789862386153,30.9792078488566,31.7886169802027,32.8794082720229,29.3379813783161,27.6971155883592,32.6780031884483,38.4395671482835,43.3901456747869,37.6127696360067,44.1579086909802,39.9172149056876,80.3924749761028,56.8605834929979,57.7462903598183,55.8668853201739,64.7717433483022,59.8672378769323,38.7368710810375,28.2929802288902,0,81.4561567698594,97.247267534718,95.7554280870511,11.7188856606334,15.626706890476,10.9939986234498,11.7646297606203,8.87959130445979,16.0218416500281,30.4670299500897,29.8048177785373,54.8804788963428,57.1145681374069,52.1080123749267,57.5577798764316,40.2469891083767,38.0763066820986,60.3760770332881,24.160695272314,13.0565185562042,17.1407837562657,46.0494390504345,31.5186783932632,41.2537673821954,36.6192794155872,38.0873505075864,38.0298842103708,41.000188380365,40.0182658250013,47.2447351572734,47.4655854032148,41.2078466668738,46.1384170198343,51.4852529130883,14.6202353354953,12.9605700798423,18.718921560273,55.7019419587417,51.9041071236292,18.8635830791029,11.0222291670972,18.3843757322004,63.8672109796454,50.4364985436492,51.4581886408416,25.5859398196576,16.2848005612289,25.5247551572812,68.9582007533411,66.9687505937699,51.3402112530082,47.1405736757868,44.9894511325165,37.839087502536,24.8381914132844,19.7997487479778,51.5958789888986,136.80739644004,101.995700056163,181.340272390307,176.089409128318,151.881114725997,87.0755404816861,63.0592193538814,71.4411512657889,65.0144817099026,55.9148376513422,55.1803852881567,61.153257529595,49.7746692207332,36.5869859308952,34.7103015700885,30.331466700887,69.3096149894694,28.2242293175417,44.2357574413178,39.554654502679,43.2340979203241,38.5127880417618,33.9125941243401,29.7499429053333,76.9079538937614,16.3148678704687,125.946039877243,28.307537662396,52.2506925330132,56.5354287258607,63.5186581607141,82.0123749359738,37.475942017478,38.5381940536757,44.1940705510863,37.1426885968353,50.9917321344397,38.1210681219194,45.0869824608516,24.2475319493872,11.3088916901578,30.7669046740329,24.2929684463814,53.1937394072474,38.6134206101263,30.9591666104962,44.4132885078032,52.3136109957707,133.209694776138,44.5011914932447,46.2103229911281,34.7519910524324,39.6353670907931,25.0374316876887,39.7152532883034,38.4177070694888,87.1830359390483,31.2573589752621,27.231275544166,30.0876422320353,26.5226836237366,24.4681579318526,20.5468778248078,31.6904490068233,53.1421492405377,37.9195121149147,32.6831842035688,34.0996199274711,62.5519833057216,60.2731974151417,76.7064381823923,59.659673367473,83.0345057974044,87.1609187813687,96.5015870714193,94.9687840954652,86.9901800635413,116.672933588658,130.841468871039,136.438806465675,171.053985287639,163.784386007124,144.942932261201,31.7537822331832,15.5385964692719,37.9981600431368,44.692145766139,54.6017921370199,45.518387684646,40.4643828551373,39.7316543507985,47.5889013828022,48.8879859109277,47.9274352159957,49.9037832813753,49.7643713424534,46.7547709296704,53.4201598706389,46.7386092500195,54.0345124686736,50.5818834066093,62.2110715126108,53.2398068761336,47.3372489826938,63.1319116320474,64.9740832011546,51.7602350790551,82.4604444100315,105.098425361477,124.185993722527,117.350702889632,99.9045353283692,30.3658092403291,31.4494392181125,27.658039823337,37.123402214096,31.1118536080618,42.2678913957157,52.6483931534983,49.7755146199359,58.7561424222494,44.5681440234799,42.4240680342094,77.6973806055256,101.031551178845,132.215893765649,107.102461742668,24.2026679118252,53.2470867075062,29.9855556653328,49.5655650463549,40.1320324573339,29.3135950523178,25.9467568565755,21.6598349122157,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| ||
|EntrezGene=66459 | |||
|HGNC= | |||
|MCL_coexpression_id=201 | |||
|UniProt=Q9D1C3 | |||
|association_with_transcript=0bp_to_ENSMUST00000053386,NM_025574,uc009ccl.1,uc009ccm.1_5end | |||
|description=CAGE_peak_1_at_Pigy_5end | |||
|id=chr6:57642001..57642078,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.63e-09!47;UBERON:0003103!7.91e-09!43;UBERON:0007100!9.19e-08!18;UBERON:0000948!9.19e-08!18;UBERON:0005498!9.19e-08!18;UBERON:0004140!9.19e-08!18;UBERON:0009881!9.19e-08!18;UBERON:0004141!9.19e-08!18;UBERON:0003084!9.19e-08!18;UBERON:0007005!9.19e-08!18;UBERON:0004139!9.19e-08!18;UBERON:0004291!9.19e-08!18;UBERON:0004535!5.15e-07!23;UBERON:0001009!5.15e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.63e-09,47;UBERON:0003103,7.91e-09,43;UBERON:0007100,9.19e-08,18;UBERON:0000948,9.19e-08,18;UBERON:0005498,9.19e-08,18;UBERON:0004140,9.19e-08,18;UBERON:0009881,9.19e-08,18;UBERON:0004141,9.19e-08,18;UBERON:0003084,9.19e-08,18;UBERON:0007005,9.19e-08,18;UBERON:0004139,9.19e-08,18;UBERON:0004291,9.19e-08,18;UBERON:0004535,5.15e-07,23;UBERON:0001009,5.15e-07,23 | |||
|phase1_expression=47.8845052843334,54.7891389993797,43.6799269813955,58.0731285709114,58.1039046737763,48.684988854448,46.4889154785096,15.1074288426644,36.0419128708267,35.577808000943,30.4767983441399,32.8661295060786,21.7424927012631,23.0789862386153,30.9792078488566,31.7886169802027,32.8794082720229,29.3379813783161,27.6971155883592,32.6780031884483,38.4395671482835,43.3901456747869,37.6127696360067,44.1579086909802,39.9172149056876,80.3924749761028,56.8605834929979,57.7462903598183,55.8668853201739,64.7717433483022,59.8672378769323,38.7368710810375,28.2929802288902,0,81.4561567698594,97.247267534718,95.7554280870511,11.7188856606334,15.626706890476,10.9939986234498,11.7646297606203,8.87959130445979,16.0218416500281,30.4670299500897,29.8048177785373,54.8804788963428,57.1145681374069,52.1080123749267,57.5577798764316,40.2469891083767,38.0763066820986,60.3760770332881,24.160695272314,13.0565185562042,17.1407837562657,46.0494390504345,31.5186783932632,41.2537673821954,36.6192794155872,38.0873505075864,38.0298842103708,41.000188380365,40.0182658250013,47.2447351572734,47.4655854032148,41.2078466668738,46.1384170198343,51.4852529130883,14.6202353354953,12.9605700798423,18.718921560273,55.7019419587417,51.9041071236292,18.8635830791029,11.0222291670972,18.3843757322004,63.8672109796454,50.4364985436492,51.4581886408416,25.5859398196576,16.2848005612289,25.5247551572812,68.9582007533411,66.9687505937699,51.3402112530082,47.1405736757868,44.9894511325165,37.839087502536,24.8381914132844,19.7997487479778,51.5958789888986,136.80739644004,101.995700056163,181.340272390307,176.089409128318,151.881114725997,87.0755404816861,63.0592193538814,71.4411512657889,65.0144817099026,55.9148376513422,55.1803852881567,61.153257529595,49.7746692207332,36.5869859308952,34.7103015700885,30.331466700887,69.3096149894694,28.2242293175417,44.2357574413178,39.554654502679,43.2340979203241,38.5127880417618,33.9125941243401,29.7499429053333,76.9079538937614,16.3148678704687,125.946039877243,28.307537662396,52.2506925330132,56.5354287258607,63.5186581607141,82.0123749359738,37.475942017478,38.5381940536757,44.1940705510863,37.1426885968353,50.9917321344397,38.1210681219194,45.0869824608516,24.2475319493872,11.3088916901578,30.7669046740329,24.2929684463814,53.1937394072474,38.6134206101263,30.9591666104962,44.4132885078032,52.3136109957707,133.209694776138,44.5011914932447,46.2103229911281,34.7519910524324,39.6353670907931,25.0374316876887,39.7152532883034,38.4177070694888,87.1830359390483,31.2573589752621,27.231275544166,30.0876422320353,26.5226836237366,24.4681579318526,20.5468778248078,31.6904490068233,53.1421492405377,37.9195121149147,32.6831842035688,34.0996199274711,62.5519833057216,60.2731974151417,76.7064381823923,59.659673367473,83.0345057974044,87.1609187813687,96.5015870714193,94.9687840954652,86.9901800635413,116.672933588658,130.841468871039,136.438806465675,171.053985287639,163.784386007124,144.942932261201,31.7537822331832,15.5385964692719,37.9981600431368,44.692145766139,54.6017921370199,45.518387684646,40.4643828551373,39.7316543507985,47.5889013828022,48.8879859109277,47.9274352159957,49.9037832813753,49.7643713424534,46.7547709296704,53.4201598706389,46.7386092500195,54.0345124686736,50.5818834066093,62.2110715126108,53.2398068761336,47.3372489826938,63.1319116320474,64.9740832011546,51.7602350790551,82.4604444100315,105.098425361477,124.185993722527,117.350702889632,99.9045353283692,30.3658092403291,31.4494392181125,27.658039823337,37.123402214096,31.1118536080618,42.2678913957157,52.6483931534983,49.7755146199359,58.7561424222494,44.5681440234799,42.4240680342094,77.6973806055256,101.031551178845,132.215893765649,107.102461742668,24.2026679118252,53.2470867075062,29.9855556653328,49.5655650463549,40.1320324573339,29.3135950523178,25.9467568565755,21.6598349122157,32.4728396858753,30.3406624818822,32.3693180374699,41.1296919936502,35.4004212825086,28.6405135991393,34.6819953060326,46.2319831245903,51.1434843939798,35.043966780701,55.2294029558004,49.6977551150941,73.7707254195039,130.527469364661,34.0748876969557,39.8247519182571,35.9757074213774,30.3490373399741,28.7410289566288,28.8738061404609,37.6473952557652,31.855888512333,34.3900366813475,46.591590881162,40.16904411394,46.1189913498191,25.5732526185114,42.5622917269141,54.4255067193848,57.5390107687306,43.5345922029242,38.4754362702032,33.6644157884081,35.3550420135517,38.7642439752332,43.6240475373007,39.5712090007041,50.2498445117947,46.3841877729995,58.7872596514665,60.5982498241743,47.1760066362033,45.0168219563986,38.1519922356234,53.3794103263243,43.3436226773031,40.4790590681218,26.7929155220847,23.2324990983073,11.0152676849186,39.6951116498931,43.0353120177263,19.3757312035087,31.9055372869944,35.0954691369221,38.2448296405993,53.9239547765224,52.6607857709848,25.8015030004758,39.8326655169019,32.0386532349601,30.7040584917646,26.928762861042,28.8260498240219,33.9956859987711,28.4101448217026,27.2253948394715,73.5096375871637,38.5929912168985,37.2074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| |||
|short_description=p1@Pigy | |||
}} |
Revision as of 10:23, 14 September 2013
Short description: | p1@Pigy |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pigy_5end |
Coexpression cluster: | MCL_coexpression_mm9:201 |
Association with transcript: | 0bp_to_ENSMUST00000053386, NM_025574, uc009ccl.1, uc009ccm.1_5end |
EntrezGene: | Pigy |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 5.63e-09 | 47 |
compound organ | 7.91e-09 | 43 |
primary circulatory organ | 9.19e-08 | 18 |
heart | 9.19e-08 | 18 |
primitive heart tube | 9.19e-08 | 18 |
primary heart field | 9.19e-08 | 18 |
anterior lateral plate mesoderm | 9.19e-08 | 18 |
heart tube | 9.19e-08 | 18 |
heart primordium | 9.19e-08 | 18 |
cardiac mesoderm | 9.19e-08 | 18 |
cardiogenic plate | 9.19e-08 | 18 |
heart rudiment | 9.19e-08 | 18 |
cardiovascular system | 5.15e-07 | 23 |
circulatory system | 5.15e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.