FFCP PHASE1:Mm9::chr6:68889550..68889579,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=419|UniProt=|association_with_transcript=-16bp_to_ENSMUST00000103339_5end|description=CAGE_peak_1_at_ENSMUST00000103339_5end|id=chr6:68889550..68889579,+|ontology_enrichment_celltype=CL:0000553!4.68e-12!6;CL:0000556!4.68e-12!6;CL:0000050!1.12e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,1.30e-22,6;CL:0000556,1.30e-22,6;CL:0000050,6.87e-15,9;CL:0002027,8.82e-12,3;CL:0002006,8.82e-12,3;CL:0002024,8.82e-12,3;CL:0000839,4.01e-10,13;CL:0000763,4.15e-08,16;CL:0000049,9.95e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.93e-14!51;UBERON:0002465!5.31e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.77e-12,3;UBERON:0007023,3.19e-11,51;UBERON:0002193,1.00e-10,48;UBERON:0002405,1.00e-10,48;UBERON:0001962,5.38e-09,2;UBERON:0001961,5.38e-09,2;UBERON:0001744,5.38e-09,2;UBERON:0001155,2.72e-08,2;UBERON:0000059,2.72e-08,2;UBERON:0002371,4.15e-08,16;UBERON:0001474,1.35e-07,22;UBERON:0004765,1.35e-07,22;UBERON:0001434,1.35e-07,22|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,4.33042690360362,55.0732727300327,16.7894850750755,85.1747846467242,94.3347303207483,78.5120855826356,0.425216450755349,0,0,90.5557113010682,95.8930794860771,0,0,0.215471232685889,3.04037471130198,0.504060259519861,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.9854336351153,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.02765491747154,64.9934087954401,0.29688427812965,0,0,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0,7.45567044872489,0,0,14.3055950916811,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.95605104266567,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.578596234326046,0,0,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,16.232733675796,0,0,0,1.50363650493128,1.14389086603261,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103339}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=419 | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENSMUST00000103339_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103339_5end | |||
|id=chr6:68889550..68889579,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.68e-12!6;CL:0000556!4.68e-12!6;CL:0000050!1.12e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.30e-22,6;CL:0000556,1.30e-22,6;CL:0000050,6.87e-15,9;CL:0002027,8.82e-12,3;CL:0002006,8.82e-12,3;CL:0002024,8.82e-12,3;CL:0000839,4.01e-10,13;CL:0000763,4.15e-08,16;CL:0000049,9.95e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-14!51;UBERON:0002465!5.31e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.77e-12,3;UBERON:0007023,3.19e-11,51;UBERON:0002193,1.00e-10,48;UBERON:0002405,1.00e-10,48;UBERON:0001962,5.38e-09,2;UBERON:0001961,5.38e-09,2;UBERON:0001744,5.38e-09,2;UBERON:0001155,2.72e-08,2;UBERON:0000059,2.72e-08,2;UBERON:0002371,4.15e-08,16;UBERON:0001474,1.35e-07,22;UBERON:0004765,1.35e-07,22;UBERON:0001434,1.35e-07,22 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,4.33042690360362,55.0732727300327,16.7894850750755,85.1747846467242,94.3347303207483,78.5120855826356,0.425216450755349,0,0,90.5557113010682,95.8930794860771,0,0,0.215471232685889,3.04037471130198,0.504060259519861,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.9854336351153,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.02765491747154,64.9934087954401,0.29688427812965,0,0,0,0,0,0,0,0,2.65383165584962,0,0.220841518460394,0,7.45567044872489,0,0,14.3055950916811,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.95605104266567,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.578596234326046,0,0,1.96705709207614,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,16.232733675796,0,0,0,1.50363650493128,1.14389086603261,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103339 | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p1@ENSMUST00000103339 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103339_5end |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | -16bp_to_ENSMUST00000103339_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.30e-22 | 6 |
megakaryocyte | 1.30e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 6.87e-15 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 8.82e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.82e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.82e-12 | 3 |
myeloid lineage restricted progenitor cell | 4.01e-10 | 13 |
myeloid cell | 4.15e-08 | 16 |
common myeloid progenitor | 9.95e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.77e-12 | 3 |
adult organism | 3.19e-11 | 51 |
hemolymphoid system | 1.00e-10 | 48 |
immune system | 1.00e-10 | 48 |
gut-associated lymphoid tissue | 5.38e-09 | 2 |
mucosa-associated lymphoid tissue | 5.38e-09 | 2 |
lymphoid tissue | 5.38e-09 | 2 |
colon | 2.72e-08 | 2 |
large intestine | 2.72e-08 | 2 |
bone marrow | 4.15e-08 | 16 |
bone element | 1.35e-07 | 22 |
skeletal element | 1.35e-07 | 22 |
skeletal system | 1.35e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.