FFCP PHASE1:Hg19::chrX:152770200..152770258,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=633|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1044|TSSclassifier=S|UniProt=B4DQD6|association_with_transcript=55bp_to_AK298756_5end|coexpression_cluster_id=C288|description=CAGE_peak_4_at_BGN_5end|id=chrX:152770200..152770258,+|ontology_enrichment_celltype=CL:0000055!3.13e-22!180;CL:0000057!1.77e-13!75;CL:0000359!5.71e-13!32;CL:0000183!1.17e-12!59;CL:0000187!1.49e-12!54;CL:0000680!3.40e-12!57;CL:0000056!3.40e-12!57;CL:0000355!3.40e-12!57;CL:0000222!3.45e-12!119;CL:0000192!5.29e-12!42;CL:0000514!5.29e-12!42;CL:0000393!4.27e-10!60;CL:0000211!4.27e-10!60|ontology_enrichment_celltype_v019=CL:0000359;4.35e-12;32!CL:0000327;4.03e-08;15!CL:0002334;5.35e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,3.93e-14,76;CL:0000359,2.68e-12,32;CL:0000187,4.31e-09,55;CL:0000680,1.13e-08,58;CL:0000056,1.13e-08,58;CL:0000355,1.13e-08,58;CL:0000222,1.91e-08,121;CL:0000327,4.54e-08,15;CL:0000192,4.61e-08,43;CL:0000514,4.61e-08,43;CL:0000393,3.62e-07,61;CL:0000211,3.62e-07,61;CL:0002334,5.92e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.14e-23!84;UBERON:0002049!3.91e-22!79;UBERON:0007798!3.91e-22!79;UBERON:0001981!2.63e-21!60;UBERON:0007500!2.63e-21!60;UBERON:0004537!2.63e-21!60;UBERON:0006965!2.63e-21!60;UBERON:0000055!4.74e-20!69;UBERON:0001009!9.03e-19!113;UBERON:0004535!4.20e-18!110;UBERON:0001637!4.38e-18!42;UBERON:0003509!4.38e-18!42;UBERON:0004572!4.38e-18!42;UBERON:0003914!9.27e-17!118;UBERON:0000477!8.21e-16!286;UBERON:0000025!3.07e-15!194;UBERON:0004573!6.52e-15!33;UBERON:0004571!6.52e-15!33;UBERON:0004111!1.60e-14!241;UBERON:0002385!8.02e-13!63;UBERON:0001015!8.02e-13!63;UBERON:0000383!8.02e-13!63;UBERON:0001134!1.07e-12!61;UBERON:0002036!1.07e-12!61;UBERON:0003082!1.07e-12!61;UBERON:0000119!1.66e-12!312;UBERON:0004290!3.39e-12!70;UBERON:0000914!3.54e-12!83;UBERON:0002329!3.54e-12!83;UBERON:0003077!3.54e-12!83;UBERON:0003059!3.54e-12!83;UBERON:0007282!3.54e-12!83;UBERON:0009618!3.54e-12!83;UBERON:0007285!3.54e-12!83;UBERON:0000483!1.37e-11!309;UBERON:0000475!2.42e-10!365;UBERON:0000490!1.13e-09!138;UBERON:0000947!1.54e-09!21;UBERON:0010191!1.54e-09!21;UBERON:0007100!2.85e-09!27;UBERON:0005256!2.93e-09!143;UBERON:0000486!4.63e-09!82;UBERON:0000948!1.03e-08!24;UBERON:0005498!1.03e-08!24;UBERON:0004140!1.03e-08!24;UBERON:0009881!1.03e-08!24;UBERON:0004141!1.03e-08!24;UBERON:0003084!1.03e-08!24;UBERON:0007005!1.03e-08!24;UBERON:0004139!1.03e-08!24;UBERON:0004291!1.03e-08!24;UBERON:0007023!1.35e-08!115;UBERON:0000481!6.66e-08!347;UBERON:0000468!5.95e-07!659|ontology_enrichment_uberon_v019=UBERON:0001637;1.21e-13;42!UBERON:0003509;1.21e-13;42!UBERON:0004572;1.21e-13;42!UBERON:0004573;8.47e-13;33!UBERON:0004571;8.47e-13;33!UBERON:0007100;2.03e-09;25!UBERON:0000948;2.99e-09;22!UBERON:0007500;9.35e-09;56!UBERON:0001981;9.35e-09;56!UBERON:0004537;9.35e-09;56!UBERON:0000055;2.73e-08;65!UBERON:0000947;6.62e-08;21!UBERON:0010191;6.62e-08;21!UBERON:0002049;3.11e-07;75!UBERON:0007798;3.11e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0004872,6.13e-23,83;UBERON:0002049,1.38e-19,78;UBERON:0007798,1.38e-19,78;UBERON:0007500,1.61e-19,59;UBERON:0001981,1.61e-19,59;UBERON:0004537,1.61e-19,59;UBERON:0006965,1.61e-19,59;UBERON:0000055,3.82e-19,68;UBERON:0001637,2.99e-18,42;UBERON:0003509,2.99e-18,42;UBERON:0004572,2.99e-18,42;UBERON:0001009,4.14e-18,112;UBERON:0004535,9.44e-18,109;UBERON:0003914,4.93e-16,117;UBERON:0004573,2.54e-14,33;UBERON:0004571,2.54e-14,33;UBERON:0007100,3.56e-10,27;UBERON:0000948,4.40e-10,24;UBERON:0005498,4.40e-10,24;UBERON:0004140,4.40e-10,24;UBERON:0009881,4.40e-10,24;UBERON:0004141,4.40e-10,24;UBERON:0003084,4.40e-10,24;UBERON:0007005,4.40e-10,24;UBERON:0004139,4.40e-10,24;UBERON:0004291,4.40e-10,24;UBERON:0001134,6.00e-09,62;UBERON:0002036,6.00e-09,62;UBERON:0003082,6.00e-09,62;UBERON:0002385,8.52e-09,64;UBERON:0001015,8.52e-09,64;UBERON:0000383,8.52e-09,64;UBERON:0007524,2.63e-08,73;UBERON:0002329,3.39e-08,71;UBERON:0003059,3.39e-08,71;UBERON:0007282,3.39e-08,71;UBERON:0004290,3.39e-08,71;UBERON:0009618,3.39e-08,71;UBERON:0000947,6.37e-08,21;UBERON:0010191,6.37e-08,21;UBERON:0003077,6.44e-08,72;UBERON:0007285,6.44e-08,72;UBERON:0007503,1.05e-07,78;UBERON:0003104,4.26e-07,160;UBERON:0009142,4.26e-07,160;UBERON:0000025,5.76e-07,192|phase1_expression=0.726713517082227,2.14100523890983,0.704772020479856,3.00219895059391,2.23480547213644,3.48935409640147,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0,2.47532705920093,2.98257638155124,9.41255205032485,5.42425075221579,7.30310090387373,4.87932798790507,0.369363174230364,3.06001036866379,1.88072832886853,0,0.410623275218653,2.00868223351684,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |||
|TSSclassifier=S | |||
|UniProt=B4DQD6 | |||
|association_with_transcript=55bp_to_AK298756_5end | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_4_at_BGN_5end | |||
|id=chrX:152770200..152770258,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.13e-22!180;CL:0000057!1.77e-13!75;CL:0000359!5.71e-13!32;CL:0000183!1.17e-12!59;CL:0000187!1.49e-12!54;CL:0000680!3.40e-12!57;CL:0000056!3.40e-12!57;CL:0000355!3.40e-12!57;CL:0000222!3.45e-12!119;CL:0000192!5.29e-12!42;CL:0000514!5.29e-12!42;CL:0000393!4.27e-10!60;CL:0000211!4.27e-10!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.35e-12;32!CL:0000327;4.03e-08;15!CL:0002334;5.35e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.93e-14,76;CL:0000359,2.68e-12,32;CL:0000187,4.31e-09,55;CL:0000680,1.13e-08,58;CL:0000056,1.13e-08,58;CL:0000355,1.13e-08,58;CL:0000222,1.91e-08,121;CL:0000327,4.54e-08,15;CL:0000192,4.61e-08,43;CL:0000514,4.61e-08,43;CL:0000393,3.62e-07,61;CL:0000211,3.62e-07,61;CL:0002334,5.92e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p4@BGN | |||
}} |
Revision as of 11:15, 14 September 2013
Short description: | p4@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 55bp_to_AK298756_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | B4DQD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.93e-14 | 76 |
vascular associated smooth muscle cell | 2.68e-12 | 32 |
muscle cell | 4.31e-09 | 55 |
muscle precursor cell | 1.13e-08 | 58 |
myoblast | 1.13e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-08 | 58 |
mesodermal cell | 1.91e-08 | 121 |
extracellular matrix secreting cell | 4.54e-08 | 15 |
smooth muscle cell | 4.61e-08 | 43 |
smooth muscle myoblast | 4.61e-08 | 43 |
electrically responsive cell | 3.62e-07 | 61 |
electrically active cell | 3.62e-07 | 61 |
preadipocyte | 5.92e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.